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A comparative full-length transcriptomic resource provides insight into the perennial monocarpic mass flowering 期刊论文
PLANT JOURNAL, 2023, 卷号: 116, 期号: 6, 页码: 1842-1855
作者:  Zhao,Jiu-Xia;  Wang,Shu;  Liu,Jiazhi;  Jiang,Xiao-Dong;  Wen,Jing;  Suo,Zhi-Quan;  Liu,Jie;  Zhong,Mi-Cai;  Wang,Qin;  Gu,Zhirong;  Liu,Changning;  Deng,Yunfei;  Hu,Jin-Yong;  Li,De-Zhu
浏览  |  Adobe PDF(3213Kb)  |  收藏  |  浏览/下载：31/9  |  提交时间：2024/07/10
perennial monocarpic mass flowering  Strobilanthes  ISO-seq  RNA-seq  BlueOmics  PSEUDO-RESPONSE REGULATORS  STROBILANTHES ACANTHACEAE  EXPRESSION ANALYSIS  GENE  TIME  PROTEIN  LONG  FKF1  PRR5  CLASSIFICATION  
Dynamics of imprinted genes and their epigenetic mechanisms in castor bean seed with persistent endosperm 期刊论文
NEW PHYTOLOGIST, 2023, 卷号: 240, 期号: 5, 页码: 1868-1882
作者:  Han,Bing;  Li,Yelan;  Wu,Di;  Li,De-Zhu;  Liu,Aizhong;  Xu,Wei
浏览  |  Adobe PDF(4056Kb)  |  收藏  |  浏览/下载：18/7  |  提交时间：2024/07/10
castor bean  DNA methylation  endosperm  epigenetic mechanisms  genomic imprinting  histone modifications  DNA METHYLATION  ARABIDOPSIS  EXPRESSION  EVOLUTION  PROTEIN  PLANTS  CONSERVATION  DEMETER  PHERES1  COAT  
Multiple paternally inherited chloroplast capture events associated with Taxus speciation in the Hengduan Mountains 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2023, 卷号: 189, 页码: 107915
作者:  Qin,Han-Tao;  Moller,Michael;  Milne,Richard;  Luo,Ya-Huang;  Zhu,Guang-Fu;  Li,De-Zhu;  Liu,Jie;  Gao,Lian-Ming
浏览  |  Adobe PDF(4015Kb)  |  收藏  |  浏览/下载：28/11  |  提交时间：2024/07/25
Chloroplast capture  Genomic data  Hybridization  Hengduan Mountains  Phylogeny tree discordance  Taxus  POPULATION-SIZE CHANGES  TIBETAN PLATEAU MARGIN  CYTOPLASMIC INHERITANCE  HYBRID SPECIATION  GENETIC DIVERSITY  PINUS-DENSATA  R PACKAGE  TOOL SET  HYBRIDIZATION  BIODIVERSITY  
Variation in gene expression along an elevation gradient of Rhododendron sanguineum var. haemaleum assessed in a comparative transcriptomic analysis 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1133065
作者:  Ye,Lin-Jiang;  Moller,Michael;  Luo,Ya-Huang;  Zou,Jia-Yun;  Zheng,Wei;  Liu,Jie;  Li,De-Zhu;  Gao,Lian-Ming
浏览  |  Adobe PDF(4904Kb)  |  收藏  |  浏览/下载：69/27  |  提交时间：2024/05/09
Rhododendron  elevational gradients  evolutionary adaptation  RNA-seq  organ-specific profile  alpine ecosystem  YOUNG LEAVES  ADAPTATION  ANTHOCYANINS  BIOSYNTHESIS  GENERATION  DIVERSITY  ALIGNMENT  ALTITUDE  PHOTOSYNTHESIS  REPRODUCTION  
Plastome evolution in the East Asian lobelias (Lobelioideae) using phylogenomic and comparative analyses 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1144406
作者:  Li,Chun-Jiao;  Xie,Xin-Tong;  Liu,Hong-Xin;  Wang,Ruo-Nan;  Li,De-Zhu
浏览  |  Adobe PDF(6416Kb)  |  收藏  |  浏览/下载：69/12  |  提交时间：2024/05/09
East Asian lobelias  plastomes  phylogenomic framework  highly divergent regions  positive selection  adaptive evolution  INVERTED REPEAT  HIGH-ALTITUDE  CAMPANULACEAE  GENOMES  SELECTION  EXPANSION  SEQUENCE  TOOLS  GENE  DNA  
Epigenetic regulation of seed-specific gene expression by DNA methylation valleys in castor bean 期刊论文
BMC BIOLOGY, 2022, 卷号: 20, 期号: 1, 页码: 57
作者:  Han, Bing;  Wu, Di;  Zhang, Yanyu;  Li, De-Zhu;  Xu, Wei;  Liu, Aizhong
浏览  |  Adobe PDF(7527Kb)  |  收藏  |  浏览/下载：76/17  |  提交时间：2024/04/30
Seed-specific genes  DNA methylation valleys  Histone modifications  Enhancer  Castor bean  RICINUS-COMMUNIS L.  CENTRAL CELL  ARABIDOPSIS  EMBRYOGENESIS  TRANSCRIPTION  ENDOSPERM  IDENTIFICATION  ACCUMULATION  PLANTS  OIL  
Species-specific partial gene duplication in Arabidopsis thaliana evolved novel phenotypic effects on morphological traits under strong positive selection 期刊论文
PLANT CELL, 2022, 卷号: 34, 期号: 2, 页码: 802-817
作者:  Huang, Yuan;  Chen, Jiahui;  Dong, Chuan;  Sosa, Dylan;  Xia, Shengqian;  Ouyang, Yidan;  Fan, Chuanzhu;  Li, Dezhu;  Mortola, Emily;  Long, Manyuan;  Bergelson, Joy
浏览  |  Adobe PDF(1955Kb)  |  收藏  |  浏览/下载：85/10  |  提交时间：2024/03/11
Spatiotemporal maintenance of flora in the Himalaya biodiversity hotspot: Current knowledge and future perspectives 期刊论文
ECOLOGY AND EVOLUTION, 2021, 卷号: 11, 期号: 16, 页码: 10794-10812
作者:  Wambulwa,Moses C.;  Milne,Richard;  Wu,Zeng-Yuan;  Spicer,Robert A.;  Provan,Jim;  Luo,Ya-Huang;  Zhu,Guang-Fu;  Wang,Wan-Ting;  Wang,Hong;  Gao,Lian-Ming;  Li,De-Zhu;  Liu,Jie
浏览  |  Adobe PDF(2089Kb)  |  收藏  |  浏览/下载：235/74  |  提交时间：2022/04/02
biodiversity hotspot  climate change  elevational gradient  Himalayan flora  mountain ecosystem  spatiotemporal diversification  SPECIES RICHNESS PATTERNS  QINGHAI-TIBET PLATEAU  SOUTH ASIAN MONSOON  ELEVATIONAL GRADIENT  HENGDUAN MOUNTAINS  CLIMATE-CHANGE  BETA-DIVERSITY  QUATERNARY GLACIATION  GENETIC CONSEQUENCES  ARTIFICIAL DISPERSAL  
Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms 期刊论文
NATURE PLANTS, 2021, 卷号: 7, 期号: 8, 页码: 1015+
作者:  Stull,Gregory W.;  Qu,Xiao-Jian;  Parins-Fukuchi,Caroline;  Yang,Ying-Ying;  Yang,Jun-Bo;  Yang,Zhi-Yun;  Hu,Yi;  Ma,Hong;  Soltis,Pamela S.;  Soltis,Douglas E.;  Li,De-Zhu;  Smith,Stephen A.;  Yi,Ting-Shuang
浏览  |  Adobe PDF(3414Kb)  |  收藏  |  浏览/下载：193/86  |  提交时间：2022/04/02
SEED PLANTS  R PACKAGE  POLYPLOIDY  CONIFERS  TREE  GENERATION  INFERENCE  ANCIENT  DISCORDANCE  ANGIOSPERMS  
Rose without prickle: genomic insights linked to moisture adaptation 期刊论文
NATIONAL SCIENCE REVIEW, 2021, 卷号: 8, 期号: 12, 页码: nwab092
作者:  Zhong,Mi-Cai;  Jiang,Xiao-Dong;  Yang,Guo-Qian;  Cui,Wei-Hua;  Suo,Zhi-Quan;  Wang,Wei-Jia;  Sun,Yi-Bo;  Wang,Dan;  Cheng,Xin-Chao;  Li,Xu-Ming;  Dong,Xue;  Tang,Kai-Xue;  Li,De-Zhu;  Hu,Jin-Yong
浏览  |  Adobe PDF(3063Kb)  |  收藏  |  浏览/下载：184/73  |  提交时间：2022/04/02
Rosa wichuraiana 'Basye's Thornless'  prickle-free  water storage  gene-regulatory-network (GRN)  QTL  TRICHOME DEVELOPMENT  PROVIDES INSIGHTS  FLOWERING TIME  TRANSCRIPTION  ARABIDOPSIS  INHERITANCE  EXPRESSION  INITIATION  TRAITS  GENE