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Parallel evolution of two AIM24 protein subfamilies and their conserved functions in ER stress tolerance in land plants 期刊论文
PLANT COMMUNICATIONS, 2023, 卷号: 4, 期号: 3, 页码: 100513
作者:  Guan,Yanlong;  Chang,Guanxiao;  Zhao,Jinjie;  Wang,Qia;  Qin,Jiali;  Tang,Mengmeng;  Wang,Shuanghua;  Ma,Lan;  Ma,Jianchao;  Sun,Guiling;  Zhou,Yun;  Huang,Jinling
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Physcomitrium  Marchantia  unfolded protein response  lncRNA  AGROBACTERIUM-MEDIATED TRANSFORMATION  RETICULUM-ASSOCIATED DEGRADATION  ENDOPLASMIC-RETICULUM  TRANSCRIPTION FACTOR  VEGETATIVE GROWTH  ARABIDOPSIS  MUTAGENESIS  EXPRESSION  RESPONSES  GENES  
Metabolic and transcriptomic analyses elucidate a novel insight into the network for biosynthesis of carbohydrate and secondary metabolites in the stems of a medicinal orchid Dendrobium nobile 期刊论文
PLANT DIVERSITY, 2023, 卷号: 45, 期号: 3, 页码: 326-336
作者:  Zhang,Yu-Wen;  Shi,Yu-Cen;  Zhang,Shi-Bao
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Dendrobium nobile  Transcriptome  Metabolome  Polysaccharides  Alkaloids  Secondary metabolite biosynthesis  POLYSACCHARIDES  GENES  OFFICINALE  IDENTIFICATION  TIME  
Time to update the sectional classification of Ilex (Aquifoliaceae): New insights from Ilex phylogeny, morphology, and distribution 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2023
作者:  Yang,Yi;  Jiang,Lei;  Liu,En-De;  Liu,Wei-Li;  Chen,Li;  Kou,Yi-Xuan;  Fan,Deng-Mei;  Cheng,Shan-Mei;  Zhang,Zhi-Yong;  Peng,Hua
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classification system  distribution  Ilex L  morphology  nuclear gene  phylogeny  GLUTAMINE-SYNTHETASE NCPGS  HISTORY  GENES  
Marsdenia tenacissima genome reveals calcium adaptation and tenacissoside biosynthesis 期刊论文
PLANT JOURNAL, 2023, 卷号: 113, 期号: 6, 页码: 1146-1159
作者:  Zhou,Yanli;  Fan,Wei;  Zhang,Haoyue;  Zhang,Jingling;  Zhang,Guanghui;  Wang,Ding;  Xiang,Guisheng;  Zhao,Changhong;  Li,Lianhua;  He,Simei;  Lu,Yingchun;  Zhao,Jiuxia;  Meng,Zhengui;  Zhang,Xianmin;  Meng,Hengling;  Yin,Xinhua;  Yang,Shengchao;  Long,Guangqiang
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genome assembly  Hi-C  Apocynaceae  Ca2+ adaptation  cell-wall remodeling  Marsdenia tenacissima  CELL  GENES  TRANSCRIPTOME  MECHANISMS  ALIGNMENT  SOIL  
Developing for nutrient uptake: Induced organogenesis in parasitic plants and root nodule symbiosis 期刊论文
CURRENT OPINION IN PLANT BIOLOGY, 2023, 卷号: 76, 页码: 102473
作者:  Cui,Songkui;  Inaba,Shoko;  Suzaki,Takuya;  Yoshida,Satoko
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Haustorium  Nodule  Cytokinin  Auxin  Ethylene  Nitrogen  LOTUS-JAPONICUS  CYTOKININ RECEPTOR  HAUSTORIUM  INITIATION  PROMOTES  ETHYLENE  GENES  WELL  
Multi-omics analysis reveals the evolutionary origin of diterpenoid alkaloid biosynthesis pathways in Aconitum 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2023, 卷号: 65, 期号: 10, 页码: 2320-2335
作者:  Zhao,Dake;  Zhang,Ya;  Ren,Huanxing;  Shi,Yana;  Dong,Ding;  Li,Zonghang;  Cui,Guanghong;  Shen,Yong;  Mou,Zongmin;  Kennelly,Edward J.;  Huang,Luqi;  Ruan,Jue;  Chen,Suiyun;  Yu,Diqiu;  Cun,Yupeng
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Aconitum vilmorinianum  acute toxicity  biosynthetic pathway  diterpenoid alkaloid  evolutionary origin  genome assembly  PHYLOGENETIC ANALYSIS  SUPPLEMENT TREMBL  CANDIDATE GENES  R PACKAGE  TOOL  TRANSCRIPTOME  IDENTIFICATION  RANUNCULACEAE  PREDICTION  DIVERSITY  
Phylotranscriptomic analyses reveal deep gene tree discordance in Camellia (Theaceae) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2023, 卷号: 188, 页码: 107912
作者:  Zhang,Qiong;  Folk,Ryan A.;  Mo,Zhi-Qiong;  Ye,Hang;  Zhang,Zhao-Yuan;  Peng,Hua;  Zhao,Jian-Li;  Yang,Shi-Xiong;  Yu,Xiang-Qin
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Camellia  Gene tree discordance  Transcriptome  Rapid diversification  Selective pressure  RNA-SEQ DATA  PHYLOGENETIC ANALYSIS  NUCLEAR GENES  SEQUENCE  EVOLUTION  RESOLUTION  HISTORY  INFERENCE  ALGORITHM  SELECTION  
A chromosome-level reference genome of an aromatic medicinal plant Adenosma buchneroides 期刊论文
SCIENTIFIC DATA, 2023, 卷号: 10, 期号: 1, 页码: 660
作者:  Huang,Hui;  Wang,Chen;  Pei,Shengji;  Wang,Yuhua
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PHYLOGENETIC ANALYSIS  HI-C  TOOL  ANNOTATION  IDENTIFICATION  ALIGNMENT  TRANSCRIPTOME  PREDICTION  GENES  
Intensified livestock farming increases antibiotic resistance genotypes and phenotypes in animal feces 期刊论文
COMMUNICATIONS EARTH & ENVIRONMENT, 2023, 卷号: 4, 期号: 1, 页码: 123
作者:  Wang,Hang;  Qi,Jin-Feng;  Qin,Rong;  Ding,Kai;  Graham,David W.;  Zhu,Yong-Guan
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VETERINARY ANTIBIOTICS  SWINE  SOIL  MANURE  GENES  RESISTOMES  ABUNDANCE  BACTERIA  CATTLE  FEED  
Uncovering the first complete chloroplast genomics, comparative analysis, and phylogenetic relationships of the medicinal plants Rhamnus cathartica and Frangula alnus (Rhamnaceae) 期刊论文
PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS, 2023, 卷号: 29, 期号: 6, 页码: 855-869
作者:  Shi,Wenbo;  Hu,Siqi;  Song,Weicai;  Huang,Yahui;  Shi,Chao;  Wang,Shuo
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Rhamnus  Frangula alnus  Chloroplast genome  Comparative analysis  Divergence  Phylogenetic analysis  PHOTOSYSTEM-II  SEQUENCE  DNA  EVOLUTION  NUCLEAR  ORGANIZATION  POPULATIONS  DIVERSITY  GENES  PSBL