Knowledge Management System of Kunming Institute of Botany,CAS
| A chromosome-level reference genome of an aromatic medicinal plant Adenosma buchneroides | |
Huang,Hui; Wang,Chen ; Pei,Shengji; Wang,Yuhua
| |
| 2023 | |
| Source Publication | SCIENTIFIC DATA
 |
| ISSN | 2052-4463 |
| Volume | 10Issue:1Pages:660 |
| Abstract | Adenosma buchneroides Bonati, belonging to the genus Adenosum (Plantaginaceae), is an aromatic medicinal plant and utilized in traditional Chinese medicine. It has been widely used as plant-based repellents to prevent vector-borne diseases. However, the lack of a reference genome limits the study of conservation management and molecular biology of A. buchneroides. Here, we generated a chromosome-level de novo genome assembly of A. buchneroides which is a high-quality chromosome-scale assembly of aromatic medicinal plant in Plantaginaceae. The genome has a total length of 442.84 Mb with scaffold N50 of 27.98 Mb and 95.55% of the genome assigned to 14 chromosomes. BUSCO assessment yielded a completeness score of 97.2%. Furthermore, we predicted 24,367 protein-coding genes, and 95.79% of them was functionally annotated. The chromosome-scale genome of A. buchneroides will be a significant resource for understanding the genetic basis and evolution of active components biosynthesis, which will facilitate further study and exploit of A. buchneroides. |
| Keyword | PHYLOGENETIC ANALYSIS HI-C TOOL ANNOTATION IDENTIFICATION ALIGNMENT TRANSCRIPTOME PREDICTION GENES |
| DOI | 10.1038/s41597-023-02571-8 |
| WOS ID | WOS:001078471000004 |
| Citation statistics | |
| Document Type | 期刊论文 |
| Identifier | http://ir.kib.ac.cn/handle/151853/74875 |
| Collection | 中国科学院昆明植物研究所 |
| Recommended Citation GB/T 7714 | Huang,Hui,Wang,Chen,Pei,Shengji,et al. A chromosome-level reference genome of an aromatic medicinal plant Adenosma buchneroides[J]. SCIENTIFIC DATA,2023,10(1):660. |
| APA | Huang,Hui,Wang,Chen,Pei,Shengji,&Wang,Yuhua.(2023).A chromosome-level reference genome of an aromatic medicinal plant Adenosma buchneroides.SCIENTIFIC DATA,10(1),660. |
| MLA | Huang,Hui,et al."A chromosome-level reference genome of an aromatic medicinal plant Adenosma buchneroides".SCIENTIFIC DATA 10.1(2023):660. |
| Files in This Item: | Download All | |||||
| File Name/Size | DocType | Version | Access | License | ||
| 10.1038_s41597-023-0（4391KB） | 期刊论文 | 出版稿 | 开放获取 | CC BY-NC-SA | View Download | |
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