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Single-base methylome analysis reveals dynamic changes of genome-wide DNA methylation associated with rapid stem growth of woody bamboos 期刊论文
PLANTA, 2022, 卷号: 256, 期号: 3, 页码: 53
作者:  Niu, Liang-Zhong;  Xu, Wei;  Ma, Peng-Fei;  Guo, Zhen-Hua;  Li, De-Zhu
浏览  |  Adobe PDF(3169Kb)  |  收藏  |  浏览/下载：30/5  |  提交时间：2024/04/30
DNA methylation  Gene expression  Internode elongation  Jasmonic acid  Woody bamboos  PHENYLALANINE AMMONIA-LYASE  MOLECULAR CHARACTERIZATION  CYTOSINE METHYLTRANSFERASE  INTERNODE ELONGATION  TRANSCRIPTION FACTOR  H3 LYSINE-9  ARABIDOPSIS  EXPRESSION  DEMETHYLATION  PROTEIN  
Genome Sequences Provide Insights into the Reticulate Origin and Unique Traits of Woody Bamboos 期刊论文
MOLECULAR PLANT, 2019, 卷号: 12, 期号: 10, 页码: 1353-1365
作者:  Guo, Zhen-Hua;  Ma, Peng-Fei;  Yang, Guo-Qian;  Hu, Jin-Yong;  Liu, Yun-Long;  Xia, En-Hua;  Zhong, Mi-Cai;  Zhao, Lei;  Sun, Gui-Ling;  Xu, Yu-Xing;  Zhao, You-Jie;  Zhang, Yi-Chi;  Zhang, Yu-Xiao;  Zhang, Xue-Mei;  Zhou, Meng-Yuan;  Guo, Ying;  Guo, Cen;  Liu, Jing-Xia;  Ye, Xia-Ying;  Chen, Yun-Mei;  Yang, Yang;  Hang, Bin;  Lin, Choun-Sea;  Lu, Ying;  Li, De-Zhu
浏览  |  Adobe PDF(1655Kb)  |  收藏  |  浏览/下载：385/73  |  提交时间：2019/12/20
Bambusoideae  polyploidization  comparative genomics  subgenome evolution  flowering  
Rapid diversification of alpine bamboos associated with the uplift of the Hengduan Mountains 期刊论文
JOURNAL OF BIOGEOGRAPHY, 2019, 页码: 12
作者:  Ye, Xia-Ying;  Ma, Peng-Fei;  Yang, Guo-Qian;  Guo, Cen;  Zhang, Yu-Xiao;  Chen, Yun-Mei;  Guo, Zhen-Hua;  Li, De-Zhu
浏览  |  Adobe PDF(2351Kb)  |  收藏  |  浏览/下载：215/42  |  提交时间：2019/12/20
alpine bamboos  ddRAD-seq  diversification  molecular dating  mountain uplift  phylogeny  
Development of a universal and simplified ddRAD library preparation approach for SNP discovery and genotyping in angiosperm plants 期刊论文
PLANT METHODS, 2016, 卷号: 12, 期号: 1, 页码: 39
作者:  Yang, Guo-Qian;  Chen, Yun-Mei;  Wang, Jin-Peng;  Guo, Cen;  Zhao, Lei;  Wang, Xiao-Yan;  Guo, Ying;  Li, Li;  Li, De-Zhu;  Guo, Zhen-Hua
浏览  |  Adobe PDF(3378Kb)  |  收藏  |  浏览/下载：288/67  |  提交时间：2017/01/05
Rad-seq  Ddrad  Middrad  Genotype-by-sequencing  Next-generation Sequencing  
Multi-locus plastid phylogenetic biogeography supports the Asian hypothesis of the temperate woody bamboos (Poaceae: Bambusoideae) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2016, 卷号: 96, 期号: 1, 页码: 118-129
作者:  Zhang, Xian-Zhi;  Zeng, Chun-Xia;  Ma, Peng-Fei;  Haevermans, Thomas;  Zhang, Yu-Xiao;  Zhang, Li-Na;  Guo, Zhen-Hua;  Li, De-Zhu
浏览  |  Adobe PDF(4387Kb)  |  收藏  |  浏览/下载：278/57  |  提交时间：2016/06/27
Arundinarieae  Biogeography  Multi-locus Plastid Phylogeny  Divergence Time  Rapid Radiation  Bambusoideae  
Investigating the MicroRNAomes of Two Developmental Phases of Dendrocalamus latiflorus (Poaceae: Bambusoideae) Inflorescences 期刊论文
PLANT MOLECULAR BIOLOGY REPORTER, 2015, 卷号: 33, 期号: 4, 页码: 1141-1155
作者:  Zhao, Xu-Yao;  Wang, Xiao-Yan;  Zhao, Lei;  Zhang, Xue-Mei;  Chen, Si-Yun;  Ma, Peng-Fei;  Hu, Xiang-Yang;  Li, De-Zhu;  Guo, Zhen-Hua
Adobe PDF(1126Kb)  |  收藏  |  浏览/下载：250/34  |  提交时间：2016/01/19
Dendrocalamus Latiflorus  Mirna  Bamboo Flowering  5 '-race  Stem-loop Qrt-pcr  
Evidence for horizontal transfer of mitochondrial DNA to the plastid genome in a bamboo genus 期刊论文
SCIENTIFIC REPORTS, 2015, 卷号: 5, 页码: 11608
作者:  Ma, Peng-Fei;  Zhang, Yu-Xiao;  Guo, Zhen-Hua;  Li, De-Zhu;  Li,DZ (reprint author),Chinese Acad Sci,Kunming Inst Bot,Key Lab Plant Div & Biogeog East Asia,Kunming 650201,Yunnan,Peoples R China.;  dzl@mail.kib.ac.cn
浏览  |  Adobe PDF(980Kb)  |  收藏  |  浏览/下载：427/102  |  提交时间：2015/07/20
Chloroplast Phylogenomic Analyses Resolve Deep-Level Relationships of an Intractable Bamboo Tribe Arundinarieae (Poaceae) 期刊论文
SYSTEMATIC BIOLOGY, 2014, 卷号: 63, 期号: 6, 页码: 933-950
作者:  Ma, Peng-Fei;  Zhang, Yu-Xiao;  Zeng, Chun-Xia;  Guo, Zhen-Hua;  Li, De-Zhu;  Li,DZ (reprint author),Chinese Acad Sci,Kunming Inst Bot,132 Lanhei Rd,Kunming 650201,Yunnan,Peoples R China.;  dzl@mail.kib.ac.cn
浏览  |  Adobe PDF(1435Kb)  |  收藏  |  浏览/下载：518/139  |  提交时间：2015/01/20
Branch Length  Chloroplast Phylogenomics  Data Partitioning  Low Sequence Divergence  Sampling  Temperate Woody Bamboos  
Identification of putative orthologous genes for the phylogenetic reconstruction of temperate woody bamboos (Poaceae: Bambusoideae) 期刊论文
MOLECULAR ECOLOGY RESOURCES, 2014, 卷号: 14, 期号: 5, 页码: 988-999
作者:  Zhang, Li-Na;  Zhang, Xian-Zhi;  Zhang, Yu-Xiao;  Zeng, Chun-Xia;  Ma, Peng-Fei;  Zhao, Lei;  Guo, Zhen-Hua;  Li, De-Zhu;  Li, DZ (reprint author), Chinese Acad Sci, Kunming Inst Bot, Key Lab Plant Div & Biogeog East Asia, Kunming 650201, Yunnan, Peoples R China.;  dzl@mail.kib.ac.cn
浏览  |  Adobe PDF(406Kb)  |  收藏  |  浏览/下载：369/63  |  提交时间：2014/10/11
Arundinarieae  Fargesia  Orthologous Genes  Phyllostachys  Phylogeny  
Phylogenomic Analyses of Nuclear Genes Reveal the Evolutionary Relationships within the BEP Clade and the Evidence of Positive Selection in Poaceae 期刊论文
PLOS ONE, 2013, 卷号: 8, 期号: 5, 页码: e64642
作者:  Zhao, Lei;  Zhang, Ning;  Ma, Peng-Fei;  Liu, Qi;  Li, De-Zhu;  Guo, Zhen-Hua
浏览  |  Adobe PDF(1078Kb)  |  收藏  |  浏览/下载：878/248  |  提交时间：2013/07/24
Rna-recognition Motif  Translation Initiation-factor  Multiple Sequence Alignment  Protein-coding Sequences  Likelihood Ratio Tests  Grass Family Poaceae  Arabidopsis-thaliana  Adaptive Evolution  Molecular Evolution  Plant Phylogenetics