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Genetic innovations: Transposable element recruitment and de novo formation lead to the birth of orphan genes in the rice genome 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 页码: 11
作者:  Jin, Gui-Hua;  Zhou, Yan-Li;  Yang, Hong;  Hu, Yan-Ting;  Shi, Yong;  Li, Ling;  Siddique, Abu N.;  Liu, Chang-Ning;  Zhu, An-Dan;  Zhang, Cheng-Jun;  Li, De-Zhu
浏览  |  Adobe PDF(845Kb)  |  收藏  |  浏览/下载：291/107  |  提交时间：2020/03/17
comparative genomics  origin  orphan gene  transposable element  
Alternative splicing coupled to nonsense-mediated mRNA decay contributes to the high-altitude adaptation of maca (Lepidium meyenii) 期刊论文
GENE, 2019, 卷号: 694, 页码: 7-18
作者:  Shi, Yong;  Su, Zechun;  Yang, Hong;  Wang, Wenzhi;  Jin, Guihua;  He, Guiqing;  Siddique, Abu Nasar;  Zhang, Liangsheng;  Zhu, Andan;  Xue, Runguang;  Zhang, Chengjun
浏览  |  Adobe PDF(1643Kb)  |  收藏  |  浏览/下载：250/29  |  提交时间：2019/07/29
Alpine plants  Post-transcriptome  Intron retention  Alternative 3 ' splice site  Long non-coding RNA  Positive selection  
Rapid evolution of protein diversity by de novo origination in Oryza 期刊论文
NATURE ECOLOGY & EVOLUTION, 2019, 卷号: 3, 期号: 4, 页码: 679-690
作者:  Zhang, Li;  Ren, Yan;  Yang, Tao;  Li, Guangwei;  Chen, Jianhai;  Gschwend, Andrea R.;  Yu, Yeisoo;  Hou, Guixue;  Zi, Jin;  Zhou, Ruo;  Wen, Bo;  Zhang, Jianwei;  Chougule, Kapeel;  Wang, Muhua;  Copetti, Dario;  Peng, Zhiyu;  Zhang, Chengjun;  Zhang, Yong;  Ouyang, Yidan;  Wing, Rod A.;  Liu, Siqi;  Long, Manyuan
浏览  |  Adobe PDF(1636Kb)  |  收藏  |  浏览/下载：234/48  |  提交时间：2019/07/29
Genome sequence of Malania oleifera, a tree with great value for nervonic acid production 期刊论文
GIGASCIENCE, 2019, 卷号: 8, 期号: 2, 页码: 14
作者:  Xu, Chao-Qun;  Liu, Hui;  Zhou, Shan-Shan;  Zhang, Dong-Xu;  Zhao, Wei;  Wang, Sihai;  Chen, Fu;  Sun, Yan-Qiang;  Nie, Shuai;  Jia, Kai-Hua;  Jiao, Si-Qian;  Zhang, Ren-Gang;  Yun, Quan-Zheng;  Guan, Wenbin;  Wang, Xuewen;  Gao, Qiong;  Bennetzen, Jeffrey L.;  Maghuly, Fatemeh;  Porth, Ilga;  Van de Peer, Yves;  Wang, Xiao-Ru;  Ma, Yongpeng;  Mao, Jian-Feng
浏览  |  Adobe PDF(10694Kb)  |  收藏  |  浏览/下载：200/25  |  提交时间：2019/07/29
de novo genome assembly  vulnerable plant  Malania  nervonic acid  transcriptomes  
The draft genome assembly of Rhododendron delavayi Franch. var. delavayi 期刊论文
GIGASCIENCE, 2017, 卷号: 6, 期号: 10, 页码: 1
作者:  Zhang, Lu;  Xu, Pengwei;  Cai, Yanfei;  Ma, Lulin;  Li, Shifeng;  Li, Shufa;  Xie, Weijia;  Song, Jie;  Peng, Lvchun;  Yan, Huijun;  Zou, Ling;  Ma, Yongpeng;  Zhang, Chengjun;  Gao, Qiang;  Wang, Jihua
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Rhododendron Delavayi  Genomics  Genome Assembly  Annotation  
Angiosperm Phylogeny Based on 18S/26S rDNA Sequence Data: Constructing a Large Data SetUsing Next-Generation Sequence Data 期刊论文
International Journal of Plant Sciences, 2014, 卷号: 175, 期号: 6, 页码: 613-650
作者:  Vitor H. Maia;  Matthew A. Gitzendanner;  Pamela S. Soltis;  Gane Ka-Shu Wong;  Douglas E. Soltis
Adobe PDF(722Kb)  |  收藏  |  浏览/下载：93/1  |  提交时间：2017/07/24
Angiosperm Tree Of Life  Large Data Sets  Next-generation Sequencing  Phylogenetics  
Contradiction between Plastid Gene Transcription and Function Due to Complex Posttranscriptional Splicing: An Exemplary Study of ycf15 Function and Evolution in Angiosperms 期刊论文
PLOS ONE, 2013, 卷号: 8, 期号: 3, 页码: e59620
作者:  Shi, Chao;  Liu, Yuan;  Huang, Hui;  Xia, En-Hua;  Zhang, Hai-Bin;  Gao, Li-Zhi
浏览  |  Adobe PDF(4059Kb)  |  收藏  |  浏览/下载：392/64  |  提交时间：2013/06/08
Chloroplast Genome Sequence  Complete Nucleotide-sequence  Independent Transfers  Horizontal Transfer  Maximum-likelihood  Flowering Plants  Rna-metabolism  Nucleus  Dna  Organization  
Visualizing genomes: techniques and challenges 期刊论文
nature, 2010, 卷号: 7, 期号: 3s, 页码: S3-S11
作者:  Cydney B Nielsen;  Michael Cantor;  Inna Dubchak;  David Gordon;  Ting Wang
Adobe PDF(992Kb)  |  收藏  |  浏览/下载：164/1  |  提交时间：2017/07/26
The Sorghum bicolor genome and the diversification of grasses 期刊论文
nature, 2009, 卷号: 457, 期号: 0, 页码: 551-556
作者:  Andrew H. Paterson;  John E. Bowers;  Re´my Bruggmann;  Inna Dubchak;  Jane Grimwood;  Heidrun Gundlach;  Georg Haberer;  Uffe Hellsten;  Therese Mitros;  Alexander Poliakov;  Jeremy Schmutz;  Manuel Spannagl;  Haibao Tang;  Xiyin Wang;  Thomas Wicker;  Arvind K. Bharti;  Jarrod Chapman;  F. Alex Feltus;  Udo Gowik;  Igor V. Grigoriev;  Eric Lyons;  Christopher A. Maher;  Mihaela Martis;  Apurva Narechania;  Robert P. Otillar;  Bryan W. Penning;  Asaf A. Salamov;  Yu Wang;  Lifang Zhang;  Nicholas C. Carpita;  Michael Freeling;  Alan R. Gingle;  C. Thomas Hash;  Beat Keller;  Patricia Klein;  Stephen Kresovich;  Maureen C. McCann;  Ray Ming;  Daniel G. Peterson;  Mehboob-ur-Rahman;  Doreen Ware;  Peter Westhoff;  Klaus F. X. Mayer;  Joachim Messing;  Daniel S. Rokhsar
Adobe PDF(1105Kb)  |  收藏  |  浏览/下载：181/2  |  提交时间：2017/07/26
Proportionally more deleterious genetic variation in European than in African populations 期刊论文
nature, 2008, 卷号: 451, 期号: 0, 页码: 994-997
作者:  Kirk E. Lohmueller;  Amit R. Indap;  Steffen Schmidt;  Adam R. Boyko;  Ryan D. Hernandez;  Melissa J. Hubisz;  John J. Sninsky;  Thomas J. White;  Shamil R. Sunyaev;  Rasmus Nielsen;  Andrew G. Clark;  Carlos D. Bustamante
Adobe PDF(301Kb)  |  收藏  |  浏览/下载：39/1  |  提交时间：2017/07/26