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Epigenetic regulation of seed-specific gene expression by DNA methylation valleys in castor bean 期刊论文
BMC BIOLOGY, 2022, 卷号: 20, 期号: 1, 页码: 57
作者:  Han, Bing;  Wu, Di;  Zhang, Yanyu;  Li, De-Zhu;  Xu, Wei;  Liu, Aizhong
Adobe PDF(7527Kb)  |  收藏  |  浏览/下载：41/8  |  提交时间：2024/04/30
Seed-specific genes  DNA methylation valleys  Histone modifications  Enhancer  Castor bean  RICINUS-COMMUNIS L.  CENTRAL CELL  ARABIDOPSIS  EMBRYOGENESIS  TRANSCRIPTION  ENDOSPERM  IDENTIFICATION  ACCUMULATION  PLANTS  OIL  
Mining of the CULLIN E3 ubiquitin ligase genes in the whole genome of Salvia miltiorrhiza 期刊论文
CURRENT RESEARCH IN FOOD SCIENCE, 2022, 卷号: 5, 页码: 1760-1768
作者:  Gao, Xiankui;  Li, Xiujuan;  Chen, Chengan;  Wang, Can;  Fu, Yuqi;  Zheng, ZiZhen;  Shi, Min;  Hao, Xiaolong;  Zhao, Limei;  Qiu, Minghua;  Kai, Guoyin;  Zhou, Wei
浏览  |  Adobe PDF(5473Kb)  |  收藏  |  浏览/下载：36/7  |  提交时间：2024/04/30
Salvia miltiorrhiza  Gene family  Expression pattern  Phenolic acid  Tanshinone CULLIN E3 ubiquitin ligase  PROTEASOME SYSTEM  ARABIDOPSIS  BIOSYNTHESIS  DEGRADATION  SUBSTRATE  SEQUENCE  ADAPTERS  
Phylogenomic and comparative analyses of Coffeeae alliance (Rubiaceae): deep insights into phylogenetic relationships and plastome evolution 期刊论文
BMC PLANT BIOLOGY, 2022, 卷号: 22, 期号: 1, 页码: 88
作者:  Amenu, Sara Getachew;  Wei, Neng;  Wu, Lei;  Oyebanji, Oyetola;  Hu, Guangwan;  Zhou, Yadong;  Wang, Qingfeng
浏览  |  Adobe PDF(3070Kb)  |  收藏  |  浏览/下载：24/2  |  提交时间：2024/04/30
Coffeeae alliance  Phylogenomic  Plastome  Plastome structural variations (PSVs)  Rubiaceae  COMPLETE CHLOROPLAST GENOME  CODON USAGE BIAS  INVERTED REPEAT  SEQUENCE  ALIGNMENT  GENE  SUBFAMILIES  CONTRACTION  ANGIOSPERMS  EXPANSION  
Single-base methylome analysis reveals dynamic changes of genome-wide DNA methylation associated with rapid stem growth of woody bamboos 期刊论文
PLANTA, 2022, 卷号: 256, 期号: 3, 页码: 53
作者:  Niu, Liang-Zhong;  Xu, Wei;  Ma, Peng-Fei;  Guo, Zhen-Hua;  Li, De-Zhu
浏览  |  Adobe PDF(3169Kb)  |  收藏  |  浏览/下载：41/7  |  提交时间：2024/04/30
DNA methylation  Gene expression  Internode elongation  Jasmonic acid  Woody bamboos  PHENYLALANINE AMMONIA-LYASE  MOLECULAR CHARACTERIZATION  CYTOSINE METHYLTRANSFERASE  INTERNODE ELONGATION  TRANSCRIPTION FACTOR  H3 LYSINE-9  ARABIDOPSIS  EXPRESSION  DEMETHYLATION  PROTEIN  
The complete plastome sequence of Lilium primulinum var. burmanicum, an ornamental and medicinal plant endemic to China 期刊论文
MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 卷号: 7, 期号: 6, 页码: 1081-1083
作者:  Yin, Genshen;  Yang, Man;  Chen, Ye;  Xi, Huihui;  Jiang, Mingxing
浏览  |  Adobe PDF(570Kb)  |  收藏  |  浏览/下载：15/4  |  提交时间：2024/04/30
Lilium primulinum var  burmanicum  Liliaceae  complete chloroplast genome  phylogenetic analysis  conservation genetics  
Phylotranscriptomic analyses reveal multiple whole-genome duplication events, the history of diversification and adaptations in the Araceae 期刊论文
ANNALS OF BOTANY, 2022
作者:  Zhao, Lei;  Yang, Ying-Ying;  Qu, Xiao-Jian;  Ma, Hong;  Hu, Yi;  Li, Hong-Tao;  Yi, Ting-Shuang;  Li, De-Zhu
浏览  |  Adobe PDF(1678Kb)  |  收藏  |  浏览/下载：42/7  |  提交时间：2024/04/30
Araceae  diversification  phylogenomics  WGDs  adaptation  TRAIT-DEPENDENT SPECIATION  GENE DUPLICATION  ANGIOSPERM DIVERSIFICATION  PHYLOGENOMIC ANALYSES  NUCLEAR GENES  POLYPLOIDY  EVOLUTIONARY  FAMILY  RATES  TOOL  
Demographic history and identification of threats revealed by population genomic analysis provide insights into conservation for an endangered maple 期刊论文
MOLECULAR ECOLOGY, 2022, 卷号: 31, 期号: 3, 页码: 767-779
作者:  Ma,Yongpeng;  Liu,Detuan;  Wariss,Hafiz Muhammad;  Zhang,Rengang;  Tao,Lidan;  Milne,Richard,I;  Sun,Weibang
浏览  |  Adobe PDF(1289Kb)  |  收藏  |  浏览/下载：183/18  |  提交时间：2022/04/02
Acer yangbiense  deleterious mutation  demographic history  framework on conservation genomics  resequencing  run of homozygosity  GENETIC DIVERSITY  YUNNAN PROVINCE  ACER-YANGBIENSE  LAKE ERHAI  R PACKAGE  SELECTION  PLANT  SIZE  CLIMATE  TREE  
Phylotranscriptomics of Theaceae: generic-level relationships, reticulation and whole-genome duplication 期刊论文
ANNALS OF BOTANY, 2022, 卷号: 129, 期号: 4, 页码: 457-471
作者:  Zhang, Qiong;  Zhao, Lei;  Folk, Ryan A.;  Zhao, Jian-Li;  Zamora, Nelson A.;  Yang, Shi-Xiong;  Soltis, Douglas E.;  Soltis, Pamela S.;  Gao, Lian-Ming;  Peng, Hua;  Yu, Xiang-Qin
浏览  |  Adobe PDF(1923Kb)  |  收藏  |  浏览/下载：68/0  |  提交时间：2024/03/11
Dark-colored Oncocyclus irises in Israel analyzed by AFLP, whole chloroplast genome sequencing and species distribution modeling 期刊论文
ISRAEL JOURNAL OF ECOLOGY & EVOLUTION, 2022, 卷号: 68, 期号: 1-4, 页码: 43-53
作者:  Volis, Sergei;  Zhang, Yonghong;  Deng, Tao;  Yusupov, Ziyoviddin
浏览  |  Adobe PDF(98Kb)  |  收藏  |  浏览/下载：46/6  |  提交时间：2024/03/11
Phylogenomics and the flowering plant tree of life 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2022
作者:  Guo, Cen;  Luo, Yang;  Gao, Lian-Ming;  Yi, Ting-Shuang;  Li, Hong-Tao;  Yang, Jun-Bo;  Li, De-Zhu
浏览  |  Adobe PDF(1181Kb)  |  收藏  |  浏览/下载：4/2  |  提交时间：2024/08/21
angiosperms  hybridization  incomplete lineage sorting  orthology inference  phylogenetic conflicts  reduced representation sequencing  whole-genome sequencing  whole-genome duplication  SYSTEMATIC-ERRORS  RNA-SEQ  SEQUENCE CAPTURE  SEED PLANTS  DATA SETS  GENOME  EVOLUTION  RADSEQ  TOOL  CLASSIFICATION