The complete plastome sequence of Lilium primulinum var. burmanicum, an ornamental and medicinal plant endemic to China

doi:10.1080/23802359.2022.2086494

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	The complete plastome sequence of Lilium primulinum var. burmanicum, an ornamental and medicinal plant endemic to China
	Yin, Genshen; Yang, Man; Chen, Ye; Xi, Huihui; Jiang, Mingxing
	2022
发表期刊	MITOCHONDRIAL DNA PART B-RESOURCES
卷号	7 期号:6 页码:1081-1083
摘要	Lilium primulinum var. burmanicum (W. W. Smith) Stearn 1948 is an ornamental and medicinal plant that has an extremely limited distribution in Yunnan, China. Here, we obtained the complete plastome of L. primulinum var. burmanicum via next-generation sequencing, and conducted phylogenomic analyses with existing species from Lilium. The total length of L. primulinum var. burmanicum was 152,206 bp with a typical quadripartite structure. The whole plastome contained a pair of inverted repeats (IRa/IRb; 26,399 bp) which divided a large single-copy (LSC; 81,854 bp) and a small single-copy (SSC; 17,563 bp). The average GC content among the whole plastome sequence and the LSC, SSC, and IR regions were 37%, 34.8%, 30.6%, and 42.5%, respectively. There were 134 genes detected from the whole plastome sequence, including 87 protein-coding genes, 39 tRNAs, and 8 rRNAs. Phylogenetic analyses using maximum likelihood showed congruent results that L. primulinum var. burmanicum together with L. primulinum var. ochraceum formed a single branch. These results demonstrate a close relationship between these variation species. The newly characterized chloroplast genome presented here will provide essential data for further phylogenomic analyses of the intraspecific relationship among Lilium species and for conservation genetics research of L. primulinum var. burmanicum.
关键词	Lilium primulinum var burmanicum Liliaceae complete chloroplast genome phylogenetic analysis conservation genetics
DOI	10.1080/23802359.2022.2086494
收录类别	SCI
WOS记录号	WOS:000813729600001
引用统计
文献类型	期刊论文
条目标识符	http://ir.kib.ac.cn/handle/151853/74754
专题	中国科学院昆明植物研究所
推荐引用方式 GB/T 7714	Yin, Genshen,Yang, Man,Chen, Ye,et al. The complete plastome sequence of Lilium primulinum var. burmanicum, an ornamental and medicinal plant endemic to China[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2022,7(6):1081-1083.
APA	Yin, Genshen,Yang, Man,Chen, Ye,Xi, Huihui,&Jiang, Mingxing.(2022).The complete plastome sequence of Lilium primulinum var. burmanicum, an ornamental and medicinal plant endemic to China.MITOCHONDRIAL DNA PART B-RESOURCES,7(6),1081-1083.
MLA	Yin, Genshen,et al."The complete plastome sequence of Lilium primulinum var. burmanicum, an ornamental and medicinal plant endemic to China".MITOCHONDRIAL DNA PART B-RESOURCES 7.6(2022):1081-1083.

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