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Evolutionary history of two evergreen Rhododendron species as revealed by chromosome-level genome assembly 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1123707
Authors:  Wu,Xiaopei;  Zhang,Lu;  Wang,Xiuyun;  Zhang,Rengang;  Jin,Guihua;  Hu,Yanting;  Yang,Hong;  Wu,Zhenzhen;  Ma,Yongpeng;  Zhang,Chengjun;  Wang,Jihua
View  |  Adobe PDF(9308Kb)  |  Favorite  |  View/Download:38/8  |  Submit date:2024/05/09
Rhododendron delavayi  Rhododendron irroratum  genome evolution  gene duplication  anthocyanin biosynthesis  NBS-encoding genes  MULTIPLE SEQUENCE ALIGNMENT  RICH REPEAT GENES  PHYLOGENETIC ANALYSIS  ARABIDOPSIS-THALIANA  WHOLE-GENOME  TOOL  PIGMENTATION  DUPLICATION  RESISTANCE  ACCURATE  
Rapid evolution of T2/S-RNase genes in Fragaria linked to multiple transitions from self-incompatibility to self-compatibility 期刊论文
Plant Diversity, 2023, 卷号: 45, 页码: 219-228
Authors:  Wu Chen;  Hong Wan;  Fang Liu;  Haiyuan Du;  Chengjun Zhang;  Weishu Fan;  Andan Zhu
View  |  Adobe PDF(2786Kb)  |  Favorite  |  View/Download:114/14  |  Submit date:2024/05/23
Fragaria  Rnase T2  Self-(In)Compatibility  S-rnase  
Cold Tolerance of ScCBL6 Is Associated with Tonoplast Transporters and Photosynthesis in Arabidopsis 期刊论文
CURRENT ISSUES IN MOLECULAR BIOLOGY, 2022, 卷号: 44, 期号: 11, 页码: 5579-5592
Authors:  Zhou, Yanli;  Zhang, Jingling;  Zhao, Changhong;  Long, Guangqiang;  Zhou, Chengli;  Sun, Xudong;  Yang, Yunqiang;  Zhang, Chengjun;  Yang, Yongping
View  |  Adobe PDF(3371Kb)  |  Favorite  |  View/Download:39/7  |  Submit date:2024/04/30
calcineurin B-like protein  cold tolerance  Stipa capillacea  transcriptome  tonoplast  CALCIUM SENSOR  GENE-EXPRESSION  MONOSACCHARIDE TRANSPORTER  STRESS TOLERANCE  ABIOTIC STRESS  DROUGHT  ACCLIMATION  PROTEINS  PHOSPHORYLATION  OVEREXPRESSION  
Analysis of MYB genes in four plant species and the detection of genes associated with drought resistance 期刊论文
BOTANY, 2022, 卷号: 100, 期号: 7, 页码: 519-532
Authors:  Zhou, Yanli;  Lu, Lin;  Liu, Ningyawen;  Cao, Hua;  Li, Han;  Gui, Daping;  Wang, Jihua;  Zhang, Chengjun
Adobe PDF(3388Kb)  |  Favorite  |  View/Download:24/4  |  Submit date:2024/04/30
Ericaceae  Rhododendron  blueberry  kiwi fruit  conserved motif  GENOME-WIDE IDENTIFICATION  R2R3-MYB TRANSCRIPTION FACTOR  ABIOTIC STRESS  ABSCISIC-ACID  EXPRESSION PROFILES  ROOT-GROWTH  ARABIDOPSIS  FAMILY  TOLERANCE  OVEREXPRESSION  
Gene fusion as an important mechanism to generate new genes in the genus Oryza 期刊论文
GENOME BIOLOGY, 2022, 卷号: 23, 期号: 1, 页码: 130
Authors:  Zhou, Yanli;  Zhang, Chengjun;  Zhang, Li;  Ye, Qiannan;  Liu, Ningyawen;  Wang, Muhua;  Long, Guangqiang;  Fan, Wei;  Lon, Manyuan;  Wing, Rod A.
Adobe PDF(2953Kb)  |  Favorite  |  View/Download:35/7  |  Submit date:2024/04/30
Fusion gene  Oryza  Evolutionary patterns  Phenotype  TRANSPOSABLE ELEMENTS  RAPID EVOLUTION  CHIMERIC GENES  RICE GENOME  DUPLICATION  EXPRESSION  RETROPOSITION  ORIGINATION  COMPLEXITY  GLABERRIMA  
Temporal regulation of alternative splicing events in rice memory under drought stress 期刊论文
PLANT DIVERSITY, 2022, 卷号: 44, 期号: 1, 页码: 116-125
Authors:  Yang, Hong;  Li, Ping;  Jin, Guihua;  Gui, Daping;  Liu, Li;  Zhang, Chengjun
View  |  Adobe PDF(2117Kb)  |  Favorite  |  View/Download:23/4  |  Submit date:2024/04/30
Alternative splicing  Drought memory  Exon skipping  TRANSCRIPTION FACTOR FAMILY  GENOME-WIDE ANALYSIS  RNA-SEQ  GENE  IDENTIFICATION  SPLICEOSOME  COMPLEXITY  TOLERANCE  LANDSCAPE  PROTEIN  
Rapid Genome Evolution and Adaptation of Thlaspi arvense Mediated by Recurrent RNA-Based and Tandem Gene Duplications 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 12, 页码: 772655
Authors:  Hu, Yanting;  Wu, Xiaopei;  Jin, Guihua;  Peng, Junchu;  Leng, Rong;  Li, Ling;  Gui, Daping;  Fan, Chuanzhu;  Zhang, Chengjun
View  |  Adobe PDF(3413Kb)  |  Favorite  |  View/Download:54/7  |  Submit date:2024/03/11
High-quality evergreen azalea genome reveals tandem duplication-facilitated low-altitude adaptability and floral scent evolution 期刊论文
PLANT BIOTECHNOLOGY JOURNAL, 2021, 卷号: 19, 期号: 12, 页码: 2544-2560
Authors:  Wang,Xiuyun;  Gao,Yuan;  Wu,Xiaopei;  Wen,Xiaohui;  Li,Danqing;  Zhou,Hong;  Li,Zheng;  Liu,Bing;  Wei,Jianfen;  Chen,Fei;  Chen,Feng;  Zhang,Chengjun;  Zhang,Liangsheng;  Xia,Yiping
Favorite  |  View/Download:77/0  |  Submit date:2022/04/02
Azalea  Rhododendron ovatum  altitude  adaptability  floral scent  terpene synthase (TPS)  tandem duplication  defence response  PHYLOGENETIC ANALYSIS  TERPENE SYNTHASES  PLANT VOLATILES  SALICYLIC-ACID  JASMONIC ACID  WHOLE-GENOME  GENE  DIVERSITY  TOOL  TRANSCRIPTOME  
New Genes Interacted With Recent Whole-Genome Duplicates in the Fast Stem Growth of Bamboos 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2021, 卷号: 38, 期号: 12, 页码: 5752-5768
Authors:  Jin,Guihua;  Ma,Peng-Fei;  Wu,Xiaopei;  Gu,Lianfeng;  Long,Manyuan;  Zhang,Chengjun;  Li,De-Zhu
Favorite  |  View/Download:113/0  |  Submit date:2022/04/02
fast stem growth  orphan genes  de novo genes  WGD  woody bamboos  evolutionary innovation  EVOLUTIONARY ORIGIN  DROSOPHILA-MELANOGASTER  PHYLOGENETIC ANALYSIS  VERTEBRATE EVOLUTION  RAPID EVOLUTION  HUMAN TISSUE  YOUNG GENES  TRANSCRIPTION  EXPRESSION  HOURGLASS  
The Rhododendron Plant Genome Database (RPGD): a comprehensive online omics database for Rhododendron 期刊论文
BMC GENOMICS, 2021, 卷号: 22, 期号: 1, 页码: 376
Authors:  Liu,Ningyawen;  Zhang,Lu;  Zhou,Yanli;  Tu,Mengling;  Wu,Zhenzhen;  Gui,Daping;  Ma,Yongpeng;  Wang,Jihua;  Zhang,Chengjun
Favorite  |  View/Download:85/0  |  Submit date:2022/04/02
Rhododendron  Horticulture plant  Database  Functional genomics  COMPLETE CHLOROPLAST GENOME  ERICACEAE  YUNNAN  DNA