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Plastome phylogenomic study of Gentianeae (Gentianaceae): widespread gene tree discordance and its association with evolutionary rate heterogeneity of plastid genes 期刊论文
BMC Plant Biology, 2020, 卷号: 20, 期号: 1
Authors:  Zhang,Xu;  Sun,Yanxia;  Landis,Jacob B.;  Lv,Zhenyu;  Shen,Jun;  Zhang,Huajie;  Lin,Nan;  Li,Lijuan;  Sun,Jiao;  Deng,Tao;  Sun,Hang;  Wang,Hengchang
Favorite  |  View/Download:14/0  |  Submit date:2020/08/17
Plastome  Phylogenetic discordance  Gentianeae  Coalescence  Gene trees  Nucleotide substitution rates  Gene characteristics  Phylogenetic informativeness  
Plastome Evolution in Dolomiaea (Asteraceae, Cardueae) Using Phylogenomic and Comparative Analyses 期刊论文
FRONTIERS IN PLANT SCIENCE, 2020, 卷号: 11, 页码: 15
Authors:  Shen, Jun;  Zhang, Xu;  Landis, Jacob B.;  Zhang, Huajie;  Deng, Tao;  Sun, Hang;  Wang, Hengchang
Favorite  |  View/Download:24/0  |  Submit date:2020/06/15
Dolomiaea  plastomes  alpine environments  phylogenomic framework  highly divergent regions  positive selection  adaptive evolution  
Plastome phylogenomics, biogeography, and clade diversification of Paris (Melanthiaceae) 期刊论文
BMC PLANT BIOLOGY, 2019, 卷号: 19, 期号: 1, 页码: 14
Authors:  Ji, Yunheng;  Yang, Lifang;  Chase, Mark W.;  Liu, Changkun;  Yang, Zhenyan;  Yang, Jin;  Yang, Jun-Bo;  Yi, Ting-Shuang
View  |  Adobe PDF(3013Kb)  |  Favorite  |  View/Download:23/2  |  Submit date:2020/03/18
Plastid phylogenomics  Biogeography  Radiative diversification  Cytonuclear discordance  Large genome size  Parideae  Paris  Melanthiaceae  Trilliaceae  
Exceptionally high rates of positive selection on the rbcL gene in the genus Ilex (Aquifoliaceae) 期刊论文
BMC Evolutionary Biology, 2019, 卷号: 19, 期号: 1, 页码: 13
Authors:  Yao,Xin;  Tan,Yun-hong;  Yang,Jun-bo;  Wang,Yan;  Corlett,Richard T.;  Manen,Jean-Fran?ois
View  |  Adobe PDF(1723Kb)  |  Favorite  |  View/Download:23/0  |  Submit date:2019/11/04
Rubisco  Positive selection  PALM  Environmental adaptation  Molecular adaptation  
Genome Sequences Provide Insights into the Reticulate Origin and Unique Traits of Woody Bamboos 期刊论文
MOLECULAR PLANT, 2019, 卷号: 12, 期号: 10, 页码: 1353-1365
Authors:  Guo, Zhen-Hua;  Ma, Peng-Fei;  Yang, Guo-Qian;  Hu, Jin-Yong;  Liu, Yun-Long;  Xia, En-Hua;  Zhong, Mi-Cai;  Zhao, Lei;  Sun, Gui-Ling;  Xu, Yu-Xing;  Zhao, You-Jie;  Zhang, Yi-Chi;  Zhang, Yu-Xiao;  Zhang, Xue-Mei;  Zhou, Meng-Yuan;  Guo, Ying;  Guo, Cen;  Liu, Jing-Xia;  Ye, Xia-Ying;  Chen, Yun-Mei;  Yang, Yang;  Hang, Bin;  Lin, Choun-Sea;  Lu, Ying;  Li, De-Zhu
View  |  Adobe PDF(1655Kb)  |  Favorite  |  View/Download:101/18  |  Submit date:2019/12/20
Bambusoideae  polyploidization  comparative genomics  subgenome evolution  flowering  
Geoclimatic factors influence the population genetic connectivity of Incarvillea arguta (Bignoniaceae) in the Himalaya-Hengduan Mountains biodiversity hotspot 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 页码: 18
Authors:  Rana, Santosh Kumar;  Luo, Dong;  Rana, Hum Kala;  O'Neill, Alexander Robert;  Sun, Hang
View  |  Adobe PDF(3823Kb)  |  Favorite  |  View/Download:27/2  |  Submit date:2019/10/28
geoclimatic factors  Himalaya-Hengduan Mountains  Incarvillea arguta  phylogeography  population genetic connectivity  species distribution modelling  
Phylogenomic analyses reveal intractable evolutionary history of a temperate bamboo genus (Poaceae: Bambusoideae) 期刊论文
PLANT DIVERSITY, 2019, 卷号: 41, 期号: 4, 页码: 213-219
Authors:  Guo, Cen;  Guo, Zhen-Hua;  Li, De-Zhu
View  |  Adobe PDF(690Kb)  |  Favorite  |  View/Download:34/0  |  Submit date:2019/10/28
Shibataea  ddRAD-seq  Genome skimming  Phylogeny  Incongruence  
Isodon hsiwenii (Lamiaceae: Nepetoideae), A New Species From Yunnan, China 期刊论文
SYSTEMATIC BOTANY, 2019, 卷号: 44, 期号: 4, 页码: 913-922
Authors:  Chen, Ya-Ping;  Wilson, Trevor C.;  Zhou, Ya-Dong;  Wang, Ze-Huan;  Liu, En-De;  Peng, Hua;  Xiang, Chun-Lei
View  |  Adobe PDF(2555Kb)  |  Favorite  |  View/Download:14/4  |  Submit date:2020/03/18
Asia  Himalaya-Hengduan Mountains Region  Isodoninae  Ocimeae  rapid radiation  
Using nuclear loci and allelic variation to disentangle the phylogeny of Phyllostachys (Poaceae, Bambusoideae) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 137, 页码: 222-235
Authors:  Zhang, Li-Na;  Ma, Peng-Fei;  Zhang, Yu-Xiao;  Zeng, Chun-Xia;  Zhao, Lei;  Li, De-Zhu
View  |  Adobe PDF(3915Kb)  |  Favorite  |  View/Download:56/6  |  Submit date:2019/07/29
Alleles  Bamboo  Hybridization  Incomplete lineage sorting  Monophyly  Phylogenetic inference  
Testing and using complete plastomes and ribosomal DNA sequences as the next generation DNA barcodes in Panax (Araliaceae) 期刊论文
MOLECULAR ECOLOGY RESOURCES, 2019, 页码: 13
Authors:  Ji, Yunheng;  Liu, Changkun;  Yang, Zhenyan;  Yang, Lifang;  He, Zhengshan;  Wang, Hengchang;  Yang, Junbo;  Yi, Tingshuang
View  |  Adobe PDF(836Kb)  |  Favorite  |  View/Download:119/29  |  Submit date:2019/09/10
next-generation DNA barcodes  Panax  plastome  ribosomal DNA  species discrimination  standard DNA barcodes