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Phylogenomics of Fargesia and Yushania reveals a history of reticulate evolution 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 6, 页码: 1183-1197
Authors:  Ye,Xia-Ying;  Ma,Peng-Fei;  Guo,Cen;  Li,De-Zhu
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plastome  ddRAD  Fargesia  phylogenetic incongruence  reticulate evolution  Yushania  CONFLICTING GENE TREES  BAMBOOS POACEAE  ARUNDINARIEAE POACEAE  PHYLOGENETIC-RELATIONSHIPS  MORPHOLOGICAL EVOLUTION  BALANCING SELECTION  THAMNOCALAMUS GROUP  ALLIES GRAMINEAE  RADSEQ DATA  GBSSI GENE  
Can plastid genome sequencing be used for species identification in Lauraceae? 期刊论文
BOTANICAL JOURNAL OF THE LINNEAN SOCIETY, 2021, 卷号: 197, 期号: 1, 页码: 1-14
Authors:  Liu,Zhi-Fang;  Ma,Hui;  Ci,Xiu-Qin;  Li,Lang;  Song,Yu;  Liu,Bing;  Li,Hsi-Wen;  Wang,Shu-Li;  Qu,Xiao-Jian;  Hu,Jian-Lin;  Zhang,Xiao-Yan;  Conran,John G.;  Twyford,Alex D.;  Yang,Jun-Bo;  Hollingsworth,Peter M.;  Li,Jie
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cytonuclear discordance  DNA barcoding  nrDNA  phylogenetics  plastomes  CHLOROPLAST GENOME  ALSEODAPHNOPSIS LAURACEAE  GENE ORGANIZATION  DNA BARCODES  NUCLEAR  EVOLUTION  ALIGNMENT  CLASSIFICATION  DISCORDANCE  CINNAMOMUM  
Resolving robust phylogenetic relationships of core Brassicaceae using genome skimming data 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 3, 页码: 442-453
Authors:  Liu,Liang-Min;  Du,Xin-Yu;  Guo,Cen;  Li,De-Zhu
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core Brassicaceae  incongruence  nuclear ribosome DNA  plastid genome  MOLECULAR PHYLOGENY  CHLOROPLAST  TRIBE  BLOCKS  CHORISPOREAE  SYSTEMATICS  ANNOTATION  GENERATION  EVOLUTION  SELECTION  
Parallel ddRAD and Genome Skimming Analyses Reveal a Radiative and Reticulate Evolutionary History of the Temperate Bamboos 期刊论文
SYSTEMATIC BIOLOGY, 2021, 卷号: 70, 期号: 4, 页码: 756-773
Authors:  Guo,Cen;  Ma,Peng-Fei;  Yang,Guo-Qian;  Ye,Xia-Ying;  Guo,Ying;  Liu,Jing-Xia;  Liu,Yun-Long;  Eaton,Deren A. R.;  Guo,Zhen-Hua;  Li,De-Zhu
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Arundinarieae  ddRAD  paleopolyploid  genome skimming  rapid diversification  incongruence  ARUNDINARIEAE POACEAE BAMBUSOIDEAE  SOUTH CHINA SEA  WOODY BAMBOOS  PHYLOGENOMIC ANALYSES  ADAPTIVE RADIATION  ECOLOGICAL OPPORTUNITY  PLANT DIVERSIFICATION  ASIAN MONSOON  RADSEQ DATA  GENE TREES  
Repeated intercontinental migrations and recurring hybridizations characterise the evolutionary history of yew (Taxus L.) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2020
Authors:  Moller, Michael;  Liu, Jie;  Li, Yan;  Li, Jian-Hua;  Ye, Lin-Jiang;  Mill, Robert;  Thomas, Philip;  Li, De-Zhu;  Gao, Lian-Ming
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Leveraging plastomes for comparative analysis and phylogenomic inference within Scutellarioideae (Lamiaceae) 期刊论文
PLOS ONE, 2020
Authors:  Zhao, Fei;  Li, Bo;  Drew, Bryan T.;  Chen, Ya-Ping;  Wang, Qiang;  Yu, Wen-Bin;  Liu, En-De;  Salmaki, Yasaman;  Peng, Hua;  Xiang, Chun-Lei
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Genetic characterization of the entire range of Cycas panzhihuaensis (Cycadaceae) 期刊论文
PLANT DIVERSITY, 2020
Authors:  Xiao, Siyue;  Ji, Yunheng;  Liu, Jian;  Gong, Xun
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Plastome Evolution in Dolomiaea (Asteraceae, Cardueae) Using Phylogenomic and Comparative Analyses 期刊论文
FRONTIERS IN PLANT SCIENCE, 2020
Authors:  Shen, Jun;  Zhang, Xu;  Landis, Jacob B.;  Zhang, Huajie;  Deng, Tao;  Sun, Hang;  Wang, Hengchang
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A new subtribal classification of Arundinarieae (Poaceae, Bambusoideae) with the description of a new genus 期刊论文
PLANT DIVERSITY, 2020
Authors:  Zhang, Yu-Xiao;  Guo, Cen;  Li, De-Zhu
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Exploration of Plastid Phylogenomic Conflict Yields New Insights into the Deep Relationships of Leguminosae 期刊论文
SYSTEMATIC BIOLOGY, 2020
Authors:  Zhang, Rong;  Wang, Yin-Huan;  Jin, Jian-Jun;  Stull, Gregory W.;  Bruneau, Anne;  Cardoso, Domingos;  De Queiroz, Luciano Paganucci;  Moore, Michael J.;  Zhang, Shu-Dong;  Chen, Si-Yun;  Wang, Jian;  Li, De-Zhu;  Yi, Ting-Shuang
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