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Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms 期刊论文
nature plants, 2021
作者:  Gregory W. Stull
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Plastome phylogenomics of the East Asian endemic genus Dobinea 期刊论文
PLANT DIVERSITY, 2021, 卷号: 43, 期号: 1, 页码: 35-42
作者:  Liu,Changkun;  Yang,Jin;  Jin,Lei;  Wang,Shuying;  Yang,Zhenyan;  Ji,Yunheng
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Neo-endemism  Divergence  Dobinea delavayi  Dobinea vulgaris  Dobineeae  Anacardiaceae  QUANTITATIVE RECONSTRUCTION  MOLECULAR PHYLOGENETICS  EVOLUTIONARY HISTORY  CHLOROPLAST GENOME  SAPINDALES  MONSOON  NUCLEAR  CHINA  DIVERSIFICATION  ANACARDIACEAE  
Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms 期刊论文
NATURE PLANTS, 2021, 卷号: 7, 期号: 8, 页码: 1015+
作者:  Stull,Gregory W.;  Qu,Xiao-Jian;  Parins-Fukuchi,Caroline;  Yang,Ying-Ying;  Yang,Jun-Bo;  Yang,Zhi-Yun;  Hu,Yi;  Ma,Hong;  Soltis,Pamela S.;  Soltis,Douglas E.;  Li,De-Zhu;  Smith,Stephen A.;  Yi,Ting-Shuang
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SEED PLANTS  R PACKAGE  POLYPLOIDY  CONIFERS  TREE  GENERATION  INFERENCE  ANCIENT  DISCORDANCE  ANGIOSPERMS  
Speciation along the elevation gradient: Divergence of Roscoea species within the south slope of the Himalayas 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2021, 卷号: 164, 页码: 107292
作者:  Zhao,Jian-Li;  Paudel,Babu Ram;  Yu,Xiang-Qin;  Zhang,Jie;  Li,Qing-Jun
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Climate changes  Elevation gradient  Mountain biodiversity  Speciation  The Himalayas  ASIAN MONSOONS  PLANT  BIODIVERSITY  EVOLUTION  UPLIFT  INTROGRESSION  POPULATIONS  PHYLOGENY  MOUNTAINS  FLY  
Species delimitation with distinct methods based on molecular data to elucidate species boundaries in the Cycas taiwaniana complex (Cycadaceae) 期刊论文
TAXON, 2021, 卷号: 70, 期号: 3, 页码: 477-491
作者:  Feng,Xiu-Yan;  Wang,Xin-Hui;  Chiang,Yu-Chung;  Jian,Shu-Guang;  Gong,Xun
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Cycas taiwaniana complex  phylogeny  species delimitation  species tree  unified species concept  DNA-SEQUENCES  HAPLOTYPE RECONSTRUCTION  MICROSATELLITE MARKERS  GENETIC DIVERSITY  CHLOROPLAST  MITOCHONDRIAL  BIOGEOGRAPHY  INFERENCE  LIZARDS  RATES  
Natural hybridization among three Rhododendron species (Ericaceae) revealed by morphological and genomic evidence 期刊论文
BMC PLANT BIOLOGY, 2021, 卷号: 21, 期号: 1, 页码: 529
作者:  Zheng,Wei;  Yan,Li-Jun;  Burgess,Kevin S.;  Luo,Ya-Huang;  Zou,Jia-Yun;  Qin,Han-Tao;  Wang,Ji-Hua;  Gao,Lian-Ming
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ddRAD sequencing  Hybrid zone  Morphological trait  Genetic structure  Natural hybridization  Rhododendron  SAGEBRUSH ARTEMISIA-TRIDENTATA  NARROW HYBRID ZONE  ASYMMETRIC HYBRIDIZATION  REPRODUCTIVE ISOLATION  AQUILEGIA-FORMOSA  PINUS-DENSATA  MOUNT-ETNA  SPECIATION  ORIGIN  ADAPTATION  
Plastome phylogenomics of Cephalotaxus (Cephalotaxaceae) and allied genera 期刊论文
ANNALS OF BOTANY, 2021, 卷号: 127, 期号: 5, 页码: 697-708
作者:  Ji,Yunheng;  Liu,Changkun;  Landis,Jacob B.;  Deng,Min;  Chen,Jiahui
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Gymnosperm  Cephalotaxaceae  Taxaceae  phylogeny  molecular dating  taxonomic delineation  recent speciation  QUANTITATIVE RECONSTRUCTION  PHYLOGENETIC-RELATIONSHIPS  EVOLUTIONARY HISTORY  MOLECULAR PHYLOGENY  SOUTHWEST CHINA  TAXACEAE  FLORA  CHLOROPLAST  SEQUENCE  CLIMATE  
Plastid phylogenomic analyses of Fagales reveal signatures of conflict and ancient chloroplast capture 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2021, 卷号: 163, 页码: 107232
作者:  Yang,Ying-Ying;  Qu,Xiao-Jian;  Zhang,Rong;  Stull,Gregory W.;  Yi,Ting-Shuang
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Betulaceae  Juglandaceae  Myricaceae  Quercus  Phylogenetics  Chloroplast capture  RESTRICTION SITE VARIATION  INTERSPECIFIC GENE FLOW  DNA-SEQUENCES  EVOLUTIONARY HISTORY  MOLECULAR PHYLOGENY  CLADISTIC-ANALYSIS  SEED PLANTS  NUCLEAR  BETULACEAE  DIVERSIFICATION  
Transcriptomes of Saussurea (Asteraceae) Provide Insights into High-Altitude Adaptation 期刊论文
PLANTS-BASEL, 2021, 卷号: 10, 期号: 8, 页码: 1715
作者:  Zhang,Xu;  Sun,Yanxia;  Landis,Jacob B.;  Shen,Jun;  Zhang,Huajie;  Kuang,Tianhui;  Sun,Wenguang;  Sun,Jiao;  Tiamiyu,Bashir B.;  Deng,Tao;  Sun,Hang;  Wang,Hengchang
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high-altitude adaptation  Saussurea  transcriptomes  positive selection  extreme environments  lineage-specific genes  RNA-SEQ  HENGDUAN MOUNTAINS  STRESS ACCLIMATION  SEQUENCE ALIGNMENT  HIGH ELEVATIONS  METABOLISM  GENOME  ANNOTATION  EVOLUTION  SELECTION  
Adaptive innovation of green plants by horizontal gene transfer 期刊论文
BIOTECHNOLOGY ADVANCES, 2021, 卷号: 46, 页码: 107671
作者:  Chen,Rujia;  Huangfu,Liexiang;  Lu,Yue;  Fang,Huimin;  Xu,Yang;  Li,Pengcheng;  Zhou,Yong;  Xu,Chenwu;  Huang,Jinling;  Yang,Zefeng
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Plant evolution  adaptation  exaptation  plant-to-plant HGT  crop breeding and improvement  ICE-BINDING PROTEINS  LAND PLANTS  TRANSPOSABLE ELEMENTS  EVOLUTION  GENOME  ORIGIN  DNA  BIOSYNTHESIS  ALGA  RETROTRANSPOSONS