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Genome size variation and polyploidy prevalence in the genus Eragrostis are associated with the global dispersal in arid area 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1066925
作者:  Hutang,Ge-Ran;  Tong,Yan;  Zhu,Xun-Ge;  Gao,Li-Zhi
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genome size  phylogeny  Eragrostis  adaptation  environmental factors  GRASS SUBFAMILY CHLORIDOIDEAE  NUCLEAR-DNA CONTENT  TEF ZUCC TROTTER  CHROMOSOME-NUMBERS  PHYLOGENETIC SIGNAL  NICHE CONSERVATISM  MOLECULAR PHYLOGENY  DROUGHT TOLERANCE  MODEL SELECTION  SOUTH-AFRICAN  
Comprehensive transcriptomic profiling reveals complex molecular mechanisms in the regulation of style-length dimorphism in Guettarda speciosa (Rubiaceae), a species with anomalous distyly 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1116078
作者:  Luo,Zhonglai;  Zhao,Zhongtao;  Xu,Yuanqing;  Shi,Miaomiao;  Tu,Tieyao;  Pei,Nancai;  Zhang,Dianxiang
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anomalous distyly  brassinosteroid signaling  Guettarda speciosa  heterostyly  molecular regulation  genetic convergence  PRIMULA-VULGARIS  GENE-EXPRESSION  ANNOTATION  PATHWAY  IDENTIFICATION  AUXIN  EVOLUTION  PROTEIN  GROWTH  BKI1  
Characterizing conflict and congruence of molecular evolution across organellar genome sequences for phylogenetics in land plants 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1125107
作者:  Tyszka,Alexa S.;  Bretz,Eric C.;  Robertson,Holly M.;  Woodcock-Girard,Miles D.;  Ramanauskas,Karolis;  Larson,Drew A.;  Stull,Gregory W.;  Walker,Joseph F.
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phylogenetics  plastome  mitochondrial genome  chloroplast genome  phylogenomics  combinability  phylogenetic conflict  MITOCHONDRIAL GENOMES  PENALIZED LIKELIHOOD  NUCLEOTIDE-SEQUENCES  EXTANT GYMNOSPERMS  DYNAMIC EVOLUTION  CHLOROPLAST DNA  SEED PLANTS  GENE  RATES  RECOMBINATION  
Plastome evolution in the East Asian lobelias (Lobelioideae) using phylogenomic and comparative analyses 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1144406
作者:  Li,Chun-Jiao;  Xie,Xin-Tong;  Liu,Hong-Xin;  Wang,Ruo-Nan;  Li,De-Zhu
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East Asian lobelias  plastomes  phylogenomic framework  highly divergent regions  positive selection  adaptive evolution  INVERTED REPEAT  HIGH-ALTITUDE  CAMPANULACEAE  GENOMES  SELECTION  EXPANSION  SEQUENCE  TOOLS  GENE  DNA  
Axenic in vitro cultivation and genome diploidization of the moss Vesicularia montagnei for horticulture utilization 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1137214
作者:  Hu,Yong;  Li,Qing;  Chen,Zexi;  Xu,Zhanwu;  Li,Hongyu;  Wen,Congfa;  Duan,Liu;  Yang,Hong;  Liu,Li
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diploidization  moss  cultivation  horticulture  Vesicularia montagnei  ALLENE OXIDE CYCLASE  PHYSCOMITRELLA-PATENS  JASMONIC ACID  MICROPROPAGATION  EVOLUTIONARY  GROWTH  PLANTS  ENVIRONMENT  RARE  
Comparative analysis of the medicinal plant Polygonatum kingianum (Asparagaceae) with related verticillate leaf types of the Polygonatum species based on chloroplast genomes 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1202634
作者:  Shi,Naixing;  Yang,Zefen;  Miao,Ke;  Tang,Lilei;  Zhou,Nian;  Xie,Pingxuan;  Wen,Guosong
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Polygonatum  verticillate leaf  Polygonatum kingianum  chloroplast genome  comparative analysis  phylogenetic analysis  CODON USAGE  GENUS POLYGONATUM  SOFTWARE  TRANSFERABILITY  MITOCHONDRIAL  MARKERS  MODEL  
First comparative analysis of complete chloroplast genomes among six Hedysarum (Fabaceae) species 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1211247
作者:  Juramurodov,Inom;  Makhmudjanov,Dilmurod;  Yusupov,Ziyoviddin;  Tojibaev,Komiljon
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Hedysarum  chloroplast genome  comparative analysis  phylogeny  protein-coding genes  MAXIMUM-LIKELIHOOD  GENE-EXPRESSION  TRNL-F  SEQUENCE  MATK  ORGANIZATION  SYSTEMATICS  PHYLOGENY  INTRON  NRDNA  
Progress, challenge and prospect of plant plastome annotation 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1166140
作者:  Qu,Xiao-Jian;  Zou,Dan;  Zhang,Rui-Yu;  Stull,Gregory W.;  Yi,Ting-Shuang
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annotation standards  chloroplast genome  plastome  protein structure  pseudogenes  RNA-editing genes  MITOCHONDRIAL GENES  RNA  GENOME  SEQUENCE  CHLOROPLASTS  TRANSLATION  
Evolutionary history of two evergreen Rhododendron species as revealed by chromosome-level genome assembly 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1123707
作者:  Wu,Xiaopei;  Zhang,Lu;  Wang,Xiuyun;  Zhang,Rengang;  Jin,Guihua;  Hu,Yanting;  Yang,Hong;  Wu,Zhenzhen;  Ma,Yongpeng;  Zhang,Chengjun;  Wang,Jihua
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Rhododendron delavayi  Rhododendron irroratum  genome evolution  gene duplication  anthocyanin biosynthesis  NBS-encoding genes  MULTIPLE SEQUENCE ALIGNMENT  RICH REPEAT GENES  PHYLOGENETIC ANALYSIS  ARABIDOPSIS-THALIANA  WHOLE-GENOME  TOOL  PIGMENTATION  DUPLICATION  RESISTANCE  ACCURATE  
Comparative analyses of Linderniaceae plastomes, with implications for its phylogeny and evolution 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1265641
作者:  Yan,Rongrong;  Geng,Yanfei;  Jia,Yuhuan;  Xiang,Chunlei;  Zhou,Xinxin;  Hu,Guoxiong
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Lindernieae  Lindernia  Picria  Torenia  Scrophulariaceae  chloroplast genome  phylogenomics  SEQUENCE  PLACEMENT  SOFTWARE  TORENIA  DNA  DISINTEGRATION  MITOCHONDRIAL  ALIGNMENT  PLATFORM  GENOMES