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Characterizing conflict and congruence of molecular evolution across organellar genome sequences for phylogenetics in land plants 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1125107
作者:  Tyszka,Alexa S.;  Bretz,Eric C.;  Robertson,Holly M.;  Woodcock-Girard,Miles D.;  Ramanauskas,Karolis;  Larson,Drew A.;  Stull,Gregory W.;  Walker,Joseph F.
浏览  |  Adobe PDF(854Kb)  |  收藏  |  浏览/下载：49/11  |  提交时间：2024/05/09
phylogenetics  plastome  mitochondrial genome  chloroplast genome  phylogenomics  combinability  phylogenetic conflict  MITOCHONDRIAL GENOMES  PENALIZED LIKELIHOOD  NUCLEOTIDE-SEQUENCES  EXTANT GYMNOSPERMS  DYNAMIC EVOLUTION  CHLOROPLAST DNA  SEED PLANTS  GENE  RATES  RECOMBINATION  
Comparative analysis of the medicinal plant Polygonatum kingianum (Asparagaceae) with related verticillate leaf types of the Polygonatum species based on chloroplast genomes 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1202634
作者:  Shi,Naixing;  Yang,Zefen;  Miao,Ke;  Tang,Lilei;  Zhou,Nian;  Xie,Pingxuan;  Wen,Guosong
浏览  |  Adobe PDF(10455Kb)  |  收藏  |  浏览/下载：58/17  |  提交时间：2024/05/09
Polygonatum  verticillate leaf  Polygonatum kingianum  chloroplast genome  comparative analysis  phylogenetic analysis  CODON USAGE  GENUS POLYGONATUM  SOFTWARE  TRANSFERABILITY  MITOCHONDRIAL  MARKERS  MODEL  
Progress, challenge and prospect of plant plastome annotation 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1166140
作者:  Qu,Xiao-Jian;  Zou,Dan;  Zhang,Rui-Yu;  Stull,Gregory W.;  Yi,Ting-Shuang
浏览  |  Adobe PDF(12821Kb)  |  收藏  |  浏览/下载：44/15  |  提交时间：2024/05/09
annotation standards  chloroplast genome  plastome  protein structure  pseudogenes  RNA-editing genes  MITOCHONDRIAL GENES  RNA  GENOME  SEQUENCE  CHLOROPLASTS  TRANSLATION  
Comparative analyses of Linderniaceae plastomes, with implications for its phylogeny and evolution 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1265641
作者:  Yan,Rongrong;  Geng,Yanfei;  Jia,Yuhuan;  Xiang,Chunlei;  Zhou,Xinxin;  Hu,Guoxiong
浏览  |  Adobe PDF(5462Kb)  |  收藏  |  浏览/下载：50/13  |  提交时间：2024/05/09
Lindernieae  Lindernia  Picria  Torenia  Scrophulariaceae  chloroplast genome  phylogenomics  SEQUENCE  PLACEMENT  SOFTWARE  TORENIA  DNA  DISINTEGRATION  MITOCHONDRIAL  ALIGNMENT  PLATFORM  GENOMES  
The Evolution of Mitochondrial Genomes between Two Cymbidium Sister Species: Dozens of Circular Chromosomes and the Maintenance and Deterioration of Genome Synteny 期刊论文
GENES, 2023, 卷号: 14, 期号: 4, 页码: 864
作者:  Li,Xiaoling;  Zhe,Mengqing;  Huang,Yiwei;  Fan,Weishu;  Yang,Junbo;  Zhu,Andan
浏览  |  Adobe PDF(1010Kb)  |  收藏  |  浏览/下载：75/13  |  提交时间：2024/05/09
mitogenome  multi-chromosomes  genome synteny  recombination  nutritional modes  PLANT MITOCHONDRIAL  ALIGNMENT  SEQUENCE  RATES  MYCOHETEROTROPHY  ORGANIZATION  CHLOROPLAST  FERTILE  FUNGI  
The complete mitochondrial genome of Polyozellus multiplex (Thelephorales) 期刊论文
MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 卷号: 7, 期号: 6, 页码: 1066-1068
作者:  Liu, Jian-Wei;  Luangharn, Thatsanee;  Yang, Shi-Mei;  Yu, Fu-Qiang
浏览  |  Adobe PDF(850Kb)  |  收藏  |  浏览/下载：28/7  |  提交时间：2024/04/30
Mitochondrial genome  phylogenetic relationships  wild edible mushroom  
The complete mitochondrial genome sequence and annotation of Tylopilus plumbeoviolaceoides TH Li, B. Song & YH Shen, 2002 (Boletaceae, Boletoideae) 期刊论文
MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 卷号: 7, 期号: 6, 页码: 999-1000
作者:  Shi, Wenbo;  Song, Weicai;  Peng, Yuan;  Wang, Shuo;  Yang, Guiwen;  Shi, Chao
浏览  |  Adobe PDF(409Kb)  |  收藏  |  浏览/下载：98/11  |  提交时间：2024/04/30
Tylopilus plumbeoviolaceoides  Boletaceae  mitochondrial genome  phylogenetic relationships  
豆科系统发育基因组学 学位论文
: 中国科学院大学, 2022
作者:  张荣
Adobe PDF(26213Kb)  |  收藏  |  浏览/下载：16/0  |  提交时间：2024/05/14
豆科，叶绿体基因组，线粒体基因组，转录组，深度和族级分支，冲 突，系统发育基因组学，快速辐射演化  Legumimosae, plastome, mitochondrial genome, transcriptome, deep and tribal lineages, conflict, phylogenomics, rapid radiation  
Genome surveying reveals the complete chloroplast genome and nuclear genomic features of the crocin-producing plant Gardenia jasminoides Ellis 期刊论文
GENETIC RESOURCES AND CROP EVOLUTION, 2021, 卷号: 68, 期号: 3, 页码: 1165-1180
作者:  Wang,Wencai;  Shao,Fengqing;  Deng,Xin;  Liu,Yuanwei;  Chen,Siyun;  Li,Yongquan;  Guo,Wei;  Jiang,Qingbin;  Liang,Hong;  Zhang,Xianzhi
收藏  |  浏览/下载：147/0  |  提交时间：2022/04/02
Gardenia jasminoides  Genome surveying  Chloroplast genome  Nuclear genomic features  Crocin-producing plant  RNA  SEQUENCE  CLEAVAGE  MITOCHONDRIAL  CONSTITUENTS  ORGANIZATION  ANNOTATION  RUBIACEAE  REPEAT  ORIGIN  
Genetic Diversity and Population Structure Analysis of Wild Cymbidium tortisepalum Based on Chloroplast DNA in Yunnan Province of China 期刊论文
JOURNAL OF THE AMERICAN SOCIETY FOR HORTICULTURAL SCIENCE, 2021, 卷号: 146, 期号: 6, 页码: 424-434
作者:  Ma,Xiangli;  Tang,Min;  Bi,Yufen;  Yang,Junbo
收藏  |  浏览/下载：89/0  |  提交时间：2022/04/02
conservation  genetic differentiation  orchid  three parallel rivers region  MUTATION-RATE  GENOME  DIFFERENTIATION  MITOCHONDRIAL  ORCHIDACEAE  SEQUENCES  ELEVATION  TESTS