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Multiple paternally inherited chloroplast capture events associated with Taxus speciation in the Hengduan Mountains 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2023, 卷号: 189, 页码: 107915
作者:  Qin,Han-Tao;  Moller,Michael;  Milne,Richard;  Luo,Ya-Huang;  Zhu,Guang-Fu;  Li,De-Zhu;  Liu,Jie;  Gao,Lian-Ming
浏览  |  Adobe PDF(4015Kb)  |  收藏  |  浏览/下载：49/12  |  提交时间：2024/07/25
Chloroplast capture  Genomic data  Hybridization  Hengduan Mountains  Phylogeny tree discordance  Taxus  POPULATION-SIZE CHANGES  TIBETAN PLATEAU MARGIN  CYTOPLASMIC INHERITANCE  HYBRID SPECIATION  GENETIC DIVERSITY  PINUS-DENSATA  R PACKAGE  TOOL SET  HYBRIDIZATION  BIODIVERSITY  
Phylotranscriptomic analyses reveal deep gene tree discordance in Camellia (Theaceae) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2023, 卷号: 188, 页码: 107912
作者:  Zhang,Qiong;  Folk,Ryan A.;  Mo,Zhi-Qiong;  Ye,Hang;  Zhang,Zhao-Yuan;  Peng,Hua;  Zhao,Jian-Li;  Yang,Shi-Xiong;  Yu,Xiang-Qin
浏览  |  Adobe PDF(2003Kb)  |  收藏  |  浏览/下载：44/14  |  提交时间：2024/07/25
Camellia  Gene tree discordance  Transcriptome  Rapid diversification  Selective pressure  RNA-SEQ DATA  PHYLOGENETIC ANALYSIS  NUCLEAR GENES  SEQUENCE  EVOLUTION  RESOLUTION  HISTORY  INFERENCE  ALGORITHM  SELECTION  
Editorial: Rise to the challenges in plastome phylogenomics 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1200302
作者:  Dong,Wenpan;  Gao,Lianming;  Xu,Chao;  Song,Yu;  Poczai,Peter
浏览  |  Adobe PDF(272Kb)  |  收藏  |  浏览/下载：63/13  |  提交时间：2024/05/09
plastome phylogenomics  incomplete lineage sorting  introgression  species tree  phylogenetic discordance  
Variations in genetic diversity in cultivated Pistacia chinensis 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 13, 页码: 1030647
作者:  Han, Biao;  Zhang, Ming-Jia;  Xian, Yang;  Xu, Hui;  Cui, Cheng-Cheng;  Liu, Dan;  Wang, Lei;  Li, De-Zhu;  Li, Wen-Qing;  Xie, Xiao-Man
浏览  |  Adobe PDF(4051Kb)  |  收藏  |  浏览/下载：37/7  |  提交时间：2024/08/21
discordance  genetic diversity  nuclear SNPs  Pistacia chinensis  plastome  MOLECULAR EVOLUTION  RATES  POPULATIONS  SELECTION  ALIGNMENT  HISTORY  
Phylogenomic conflict coincides with rapid morphological innovation 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2021, 卷号: 118, 期号: 19, 页码: e2023058118
作者:  Parins-Fukuchi,Caroline;  Stull,Gregory W.;  Smith,Stephen A.
收藏  |  浏览/下载：94/0  |  提交时间：2022/04/02
phylogenomics  morphological evolution  gene-tree discordance  tempo and mode  molecular evolution  GENE TREE DISCORDANCE  FOSSIL FLOWERS  SEED PLANTS  CARYOPHYLLALES  EVOLUTION  ORIGIN  ANCIENT  ROOT  LIFE  DIVERSIFICATION  
Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms 期刊论文
NATURE PLANTS, 2021, 卷号: 7, 期号: 8, 页码: 1015+
作者:  Stull,Gregory W.;  Qu,Xiao-Jian;  Parins-Fukuchi,Caroline;  Yang,Ying-Ying;  Yang,Jun-Bo;  Yang,Zhi-Yun;  Hu,Yi;  Ma,Hong;  Soltis,Pamela S.;  Soltis,Douglas E.;  Li,De-Zhu;  Smith,Stephen A.;  Yi,Ting-Shuang
浏览  |  Adobe PDF(3414Kb)  |  收藏  |  浏览/下载：210/89  |  提交时间：2022/04/02
SEED PLANTS  R PACKAGE  POLYPLOIDY  CONIFERS  TREE  GENERATION  INFERENCE  ANCIENT  DISCORDANCE  ANGIOSPERMS  
Evolutionary history of a desert perennial Arnebia szechenyi (Boraginaceae): Intraspecific divergence, regional expansion and asymmetric gene flow 期刊论文
PLANT DIVERSITY, 2021, 卷号: 43, 期号: 6, 页码: 462-471
作者:  Fu,Meng-Jiao;  Wu,Hai-Yang;  Jia,Dong-Rui;  Tian,Bin
浏览  |  Adobe PDF(2536Kb)  |  收藏  |  浏览/下载：77/5  |  提交时间：2022/04/02
Asymmetric Gene Flow  Cytonuclear Discordance  Desert Growth  Intraspecific Divergence  Mitochondrial-dna  Environmental-change  Population-genetics  Statistical Tests  Drill Core  Phylogeography  Chloroplast  Quaternary  China  Consequences  
Can plastid genome sequencing be used for species identification in Lauraceae? 期刊论文
BOTANICAL JOURNAL OF THE LINNEAN SOCIETY, 2021, 卷号: 197, 期号: 1, 页码: 1-14
作者:  Liu,Zhi-Fang;  Ma,Hui;  Ci,Xiu-Qin;  Li,Lang;  Song,Yu;  Liu,Bing;  Li,Hsi-Wen;  Wang,Shu-Li;  Qu,Xiao-Jian;  Hu,Jian-Lin;  Zhang,Xiao-Yan;  Conran,John G.;  Twyford,Alex D.;  Yang,Jun-Bo;  Hollingsworth,Peter M.;  Li,Jie
收藏  |  浏览/下载：214/0  |  提交时间：2022/04/02
cytonuclear discordance  DNA barcoding  nrDNA  phylogenetics  plastomes  CHLOROPLAST GENOME  ALSEODAPHNOPSIS LAURACEAE  GENE ORGANIZATION  DNA BARCODES  NUCLEAR  EVOLUTION  ALIGNMENT  CLASSIFICATION  DISCORDANCE  CINNAMOMUM  
Plastome phylogenomics, biogeography, and clade diversification of Paris (Melanthiaceae) 期刊论文
BMC PLANT BIOLOGY, 2019, 卷号: 19, 期号: 1, 页码: 14
作者:  Ji, Yunheng;  Yang, Lifang;  Chase, Mark W.;  Liu, Changkun;  Yang, Zhenyan;  Yang, Jin;  Yang, Jun-Bo;  Yi, Ting-Shuang
浏览  |  Adobe PDF(3013Kb)  |  收藏  |  浏览/下载：271/69  |  提交时间：2020/03/18
Plastid phylogenomics  Biogeography  Radiative diversification  Cytonuclear discordance  Large genome size  Parideae  Paris  Melanthiaceae  Trilliaceae  
Historical introgression among the species of Rodgersia (Saxifragaceae) in mountainous forests of southwest China 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2018, 卷号: 125, 期号: 1, 页码: 93-99
作者:  Ma, Xiang-Guang;  Sun, Wen-Guang;  Sun, Hang
浏览  |  Adobe PDF(1145Kb)  |  收藏  |  浏览/下载：303/67  |  提交时间：2018/07/16
Southwest China  Ancient Introgression  Secondary Contact  Cyto-nuclear Discordance