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Comparative chloroplast genome analysis of Citrus (Rutaceae) species: Insights into genomic characterization, phylogenetic relationships, and discrimination of subgenera 期刊论文
SCIENTIA HORTICULTURAE, 2023, 卷号: 313, 页码: 111909
作者:  Shi,Wenbo;  Song,Weicai;  Liu,Jin;  Shi,Chao;  Wang,Shuo
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Citrus  Plastid genomics  Genomic structure  Sequence variation  Molecular markers  Phylogeny  Taxonomy  HORT. EX TANAKA  GENETIC DIVERSITY  MOLECULAR PHYLOGENY  SPACER REGION  JEJU ISLAND  SEQUENCE  DNA  ORIGIN  TAXONOMY  AURANTIOIDEAE  
Saxifraga cataphracta (Saxifragaceae), a new species from Southwest China 期刊论文
NORDIC JOURNAL OF BOTANY, 2023, 卷号: 2023, 期号: 7
作者:  Zhang,Xin-Jian;  Zhang,Cheng;  Kuai,Xin-Yuan;  Chen,Jun-Tong;  Deng,Tao;  Sun,Hang
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DNA sequences  morphology  Saxifraga sect  Irregulares  taxonomy  HUNAN PROVINCE  INFERENCE  MRBAYES  CHOICE  
Phylogenomics and morphological evolution of the mega-diverse genus Artemisia (Asteraceae: Anthemideae): implications for its circumscription and infrageneric taxonomy 期刊论文
ANNALS OF BOTANY, 2023, 卷号: 131, 期号: 5, 页码: 867-883
作者:  Jiao,Bohan;  Chen,Chen;  Wei,Meng;  Niu,Guohao;  Zheng,Jiye;  Zhang,Guojin;  Shen,Jiahao;  Vitales,Daniel;  Valles,Joan;  Verloove,Filip;  Erst,Andrey S.;  Soejima,Akiko;  Mehregan,Iraj;  Kokubugata,Goro;  Chung,Gyu-Young;  Ge,Xuejun;  Gao,Lianming;  Yuan,Yuan;  Joly,Cyprien;  Jabbour,Florian;  Wang,Wei;  Shultz,Leila M.;  Gao,Tiangang
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Artemisia  phylogenomics  taxonomy  morphological evolution  generic delimitation  infrageneric taxonomy  genome skimming  NUCLEAR RIBOSOMAL DNA  MOLECULAR PHYLOGENY  SUBGENUS TRIDENTATAE  ALLIES ANTHEMIDEAE  ENDEMIC ARTEMISIA  TREE  L.  CLASSIFICATION  GENERA  ORIGIN  
Rediscovery of Five Rinodina Species Originally Described from Southwest China and One New Species 期刊论文
DIVERSITY-BASEL, 2023, 卷号: 15, 期号: 6, 页码: 705
作者:  Zhong,Qiuyi;  Ai,Min;  Worthy,Fiona Ruth;  Yin,Ancheng;  Jiang,Yi;  Wang,Lisong;  Wang,Xinyu
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lichenized Ascomycetes  new species  Physciaceae  taxonomy  SUBUNIT RIBOSOMAL DNA  GENUS RINODINA  LICHENIZED ASCOMYCOTINA  IQ-TREE  PHYSCIACEAE  EASTERN  EVOLUTION  PHYLOGENY  TAXONOMY  SEQUENCE  
Global consortium for the classification of fungi and fungus-like taxa 期刊论文
MYCOSPHERE, 2023, 卷号: 14, 期号: 1, 页码: 1960-2012
作者:  Hyde,K. D.;  Abdel-Wahab,M. A.;  Abdollahzadeh,J.;  Abeywickrama,P. D.;  Absalan,S.;  Afshari,N.;  Ainsworth,A. M.;  Akulov,O. Y.;  Aleoshin,V. V.;  Al-Sadi,A. M.;  Alvarado,P.;  Alves,A.;  Alves-Silva,G.;  Amalfi,M.;  Amira,Y.;  Amuhenage,T. B.;  Anderson,J. L.;  Antonin,V;  Aouali,S.;  Aptroot,A.;  Apurillo,C. C. S.;  Araujo,J. P. M.;  Ariyawansa,H. A.;  Armand,A.;  Arumugam,E.;  Asghari,R.;  Assis,D. M. A.;  Atienza,V;  Avasthi,S.;  Azevedo,E.;  Bahkali,A. H.;  Bakhshi,M.;  Banihashemi,Z.;  Bao,D. F.;  Baral,H. O.;  Barata,M.;  Barbosa,F. R.;  Barbosa,R. N.;  Barreto,R. W.;  Baschien,C.;  Belamesiatseva,D. B.;  Bennett Reuel,M.;  Bera,I;  Bezerra,J. D. P.;  Bezerra,J. L.;  Bhat,D. J.;  Bhunjun,C. S.;  Bianchinotti,M.,V;  Blaszkowski,J.;  Blondelle,A.;  Boekhout,T.;  Bonito,G.;  Boonmee,S.;  Boonyuen,N.;  Bregant,C.;  Buchanan,P.;  Bundhun,D.;  Burgaud,G.;  Burgess,T.;  Buyck,B.;  Cabarroi-Hernandez,M.;  Caceres,M. E. S.;  Caeiro,M. F.;  Cai,L.;  Cai,M. F.;  Calabon,M. S.;  Calaca,F. J. S.;  Callalli,M.;  Camara,M. P. S.;  Cano-Lira,J. F.;  Cantillo,T.;  Cao,B.;  Carlavilla,J. R.;  Carvalho,A.;  Castaneda-Ruiz,R. F.;  Castlebury,L.;  Castro-Jauregui,O.;  Catania,M. D.,V;  Cavalcanti,L. H.;  Cazabonne,J.;  Cedeno-Sanchez,M. L.;  Chaharmiri-Dokhaharani,S.;  Chaiwan,N.;  Chakraborty,N.;  Chaverri,P.;  Cheewangkoon,R.;  Chen,C.;  Chen,C. Y.;  Chen,K. H.;  Chen,J.;  Chen,Q.;  Chen,W. H.;  Chen,Y. P.;  Chethana,K. W. T.;  Coleine,C.;  Conde,T. O.;  Corazon-Guivin,M. A.;  Cortes-Perez,A.;  Costa-Rezende,D. H.;  Courtecuisse,R.;  Crouch,J. A.;  Crous,P. W.;  Cui,B. K.;  Cui,Y. Y.;  da Silva,D. K. A.;  da Silva,G. A.;  da Silva,I. R.;  da Silva,R. M. F.;  da Silva Santos,A. C.;  Dai,D. Q.;  Dai,Y. C.;  Damm,U.;  Darmostuk,V;  Zoha,Daroodi;  Das,K.;  Das,K.;  Davoodian,N.;  Davydov,E. A.;  Dayarathne,M. C.;  Decock,C.;  de Groot,M. D.;  De Kesel,A.;  dela Cruz,T. E. E.;  De Lange,R.;  Delgado,G.;  Denchev,C. M.;  Denchev,T. T.;  de Oliveira,N. T.;  de Silva,N.,I;  de Souza,F. A.;  Dentinger,B.;  Devadatha,B.;  Dianese,J. C.;  Dima,B.;  Diniz,A. G.;  Dissanayake,A. J.;  Dissanayake,L. S.;  Dogan,H. H.;  Doilom,M.;  Dolatabadi,S.;  Dong,W.;  Dong,Z. Y.;  Dos Santos,L. A.;  Drechsler-Santos,E. R.;  Du,T. Y.;  Dubey,M. K.;  Dutta,A. K.;  Egidi,E.;  Elliott,T. F.;  Elshahed,M. S.;  Erdogdu,M.;  Ertz,D.;  Etayo,J.;  Evans,H. C.;  Fan,X. L.;  Fan,Y. G.;  Fedosova,A. G.;  Fell,J.;  Fernandes,I;  Firmino,A. L.;  Fiuza,P. O.;  Flakus,A.;  Fragoso de Souza,C. A.;  Frisvad,J. C.;  Fryar,S. C.;  Gabaldon,T.;  Gajanayake,A. J.;  Galindo,L. J.;  Gannibal,P. B.;  Garcia,D.;  Garcia-Sandoval,S. R.;  Garrido-Benavent,I;  Garzoli,L.;  Gautam,A. K.;  Ge,Z-W;  Gene,D. J.;  Gentekaki,E.;  Ghobad-Nejhad,M.;  Giachini,A. J.;  Gibertoni,T. B.;  Goes-Neto,A.;  Gomdola,D.;  Gomes de Farias,A. R.;  Gorjon,S. P.;  Goto,B. T.;  Granados-Montero,M. M.;  Griffith,G. W.;  Groenewald,J. Z.;  Groenewald,M.;  Grossart,H. P.;  Gueidan,C.;  Gunarathne,A.;  Gunaseelan,S.;  Gusmao,L. F. P.;  Gutierrez,A. C.;  Guzman-Davalos,L.;  Haelewaters,D.;  Halling,R.;  Han,Y. F.;  Hapuarachchi,K. K.;  Harder,C. B.;  Harrington,T. C.;  Hattori,T.;  He,M. Q.;  He,S.;  He,S. H.;  Healy,R.;  Herandez-Restrepo,M.;  Heredia,G.;  Hodge,K. T.;  Holgado-Rojas,M.;  Hongsanan,S.;  Horak,E.;  Hosoya,T.;  Houbraken,J.;  Huang,S. K.;  Huanraluek,N.;  Hur,J. S.;  Hurdeal,V. G.;  Hustad,V. P.;  Iotti,M.;  Iturriaga,T.;  Jafar,E.;  Janik,P.;  Jany,J. L.;  Jayalal,R. G. U.;  Jayasiri,S. C.;  Jayawardena,R. S.;  Jeewon,R.;  Jeronimo,G. H.;  Jesus,A. L.;  Jin,J.;  Johnston,P. R.;  Jones,E. B. G.;  Joshi,Y.;  Justo,A.;  Kaishian,P.;  Kakishima,M.;  Kaliyaperumal,M.;  Kang,G. P.;  Kang,J. C.;  Karakehian,J. M.;  Karimi,O.;  Karpov,S. A.;  Karunarathna,S. C.;  Kaufmann,M.;  Kemler,M.;  Kezo,K.;  Khyaju,S.;  Kirchmair,M.;  Kirk,P. M.;  Kitaura,M. J.;  Klawonn,I;  Kolarik,M.;  Kong,A.;  Kuhar,F.;  Kukwa,M.;  Kumar,S.;  Kusan,I;  Lado,C.;  Larsson,K. H.;  Latha,K. P. D.;  Lee,H. B.;  Leonardi,M.;  Leontyev,D. L.;  Lestari,A. S.;  Li,C. J. Y.;  Li,D. W.;  Li,H.;  Li,H. Y.;  Li,L.;  Li,Q. R.;  Li,Q.;  Li,W. L.;  Li,Y.;  Li,Y. C.;  Li,Y. X.;  Liao,C. F.;  Liimatainen,K.;  Lim,Y. W.;  Lin,C. G.;  Linaldeddu,B. T.;  Linde,C. C.;  Linn,M. M.;  Liu,F.;  Liu,J. K.;  Liu,N. G.;  Liu,S.;  Liu,S. L.;  Liu,X. F.;  Liu,X. Y.;  Liu,X. Z.;  Liu,Z. B.;  Lu,L.;  Lu,Y. Z.;  Luangharn,T.;  Luangsa-ard,J. J.;  Lumbsch,H. T.;  Lumyong,S.;  Luo,L.;  Luo,M.;  Luo,Z. L.;  Ma,J.;  Machado,A. R.;  Madagammana,A. D.;  Madrid,H.;  Magurno,F.;  Magyar,D.;  Mahadevan,N.;  Maharachchikumbura,S. S. N.;  Maimaiti,Y.;  Malosso,E.;  Manamgoda,D. S.;  Manawasinghe,I. S.;  Mapook,A.;  Marasinghe,D. S.;  Mardones,M.;  Marin-Felix,Y.;  Marquez,R.;  Masigol,H.;  Matocec,N.;  May,T. W.;  McKenzie,E. H. C.;  Meiras-Ottoni,A.;  Melo,R. F. R.;  Mendes-Alvarenga,R. L.;  Mendieta,S.;  Meng,Q. F.;  Menkis,A.;  Menolli,N.,Jr.;  Mesic,A.;  Meza Calvo,J. G.;  Mikhailov,K.,V;  Miller,S. L.;  Moncada,B.;  Moncalvo,J. M.;  Monteiro,J. S.;  Monteiro,M.;  Mora-Montes,H. M.;  Moreau,P. A.;  Mueller,G. M.;  Mukhopadyay,S.;  Murugadoss,R.;  Nagy,L. G.;  Najafiniya,M.;  Nanayakkara,C. M.;  Nascimento,C. C.;  Nei,Y.;  Neves,M. A.;  Neuhauser,S.;  Niego,A. G. T.;  Nilsson,R. H.;  Niskanen,T.;  Niveiro,N.;  Noorabadi,M. T.;  Noordeloos,M. E.;  Norphanphoun,C.;  Nunez Otano,N. B.;  O'Donnell,R. P.;  Oehl,F.;  Olariaga,I;  Orlando,O. P.;  Pang,K. L.;  Papp,V;  Pawlowska,J.;  Peintner,U.;  Pem,D.;  Pereira,O. L.;  Perera,R. H.;  Perez-Moreno,J.;  Perez-Ortega,S.;  Peter,G.;  Phillips,A. J. L.;  Phonemany,M.;  Phukhamsakda,C.;  Phutthacharoen,K.;  Piepenbring,M.;  Pires-Zottarelli,C. L. A.;  Poinar,G.;  Posta,A.;  Prieto,M.;  Promputtha,I;  Quandt,C. A.;  Radek,R.;  Rahnama,K.;  Raj,K. N. A.;  Rajeshkumar,K. C.;  Rama,T.;  Rambold,G.;  Ramirez-Cruz,V;  Rasconi,S.;  Rathnayaka,A. R.;  Raza,M.;  Ren,G. C.;  Robledo,G. L.;  Rodriguez-Flakus,P.;  Ronikier,A.;  Rossi,W.;  Ryberg,M.;  Ryvarden,L. R.;  Salvador-Montoya,C. A.;  Samant,B.;  Samarakoon,B. C.;  Samarakoon,M. C.;  Sanchez-Castro,I;  Sanchez-Garcia,M.;  Sandoval-Denis,M.;  Santamaria,B.;  Santiago,A. L. C. M. A.;  Sarma,V. V.;  Savchenko,A.;  Savchenko,K.;  Saxena,R. K.;  Scholler,M.;  Schoutteten,N.;  Seifollahi,E.;  Selbmann,L.;  Selcuk,F.;  Senanayake,I. C.;  Seto,K.;  Shabashova,T. G.;  Shen,H. W.;  Shen,Y. M.;  Silva-Filho,A. G. S.;  Simmons,D. R.;  Singh,R.;  Sir,E. B.;  Song,C. G.;  Souza-Motta,C. M.;  Sruthi,O. P.;  Stadler,M.;  Stchigel,A. M.;  Stemler,J.;  Stephenson,S. L.;  Strassert,J. F. H.;  Su,H. L.;  Su,L.;  Suetrong,S.;  Sulistyo,B.;  Sun,Y. F.;  Sun,Y. R.;  Svantesson,S.;  Sysouphanthong,P.;  Takamatsu,S.;  Tan,T. H.;  Tanaka,K.;  Tang,A. M. C.;  Tang,X.;  Tanney,J. B.;  Tavakol,N. M.;  Taylor,J. E.;  Taylor,P. W. J.;  Tedersoo,L.;  Tennakoon,D. S.;  Thamodini,G. K.;  Thines,M.;  Thiyagaraja,V;  Thongklang,N.;  Tiago,P.,V;  Tian,Q.;  Tian,W. H.;  Tibell,L.;  Tibell,S.;  Tibpromma,S.;  Tkalcec,Z.;  Tomsovsky,M.;  Toome-Heller,M.;  Torruella,G.;  Tsurykau,A.;  Udayanga,D.;  Ulukapi,M.;  Untereiner,W. A.;  Uzunov,B. A.;  Valle,L. G.;  Van Caenegem,W.;  Van den Wyngaert,S.;  Van Vooren,N.;  Velez,P.;  Verma,R. K.;  Vieira,L. C.;  Vieira,W. A. S.;  Vizzini,A.;  Walker,A.;  Walker,A. K.;  Wanasinghe,D. N.;  Wang,C. G.;  Wang,K.;  Wang,S. X.;  Wang,X. Y.;  Wang,Y.;  Wannasawang,N.;  Wartchow,F.;  Wei,D. P.;  Wei,X. L.;  White,J. F.;  Wijayawardene,N. N.;  Wijesinghe,S. N.;  Wijesundara,D. S. A.;  Wisitrassameewong,K.;  Worthy,F. R.;  Wu,F.;  Wu,G.;  Wu,H. X.;  Wu,N.;  Wu,W. P.;  Wurzbacher,C.;  Xiao,Y. P.;  Xiong,Y. R.;  Xu,B.;  Xu,L. J.;  Xu,R.;  Xu,R. F.;  Xu,R. J.;  Xu,T. M.;  Yakovchenko,L.;  Yan,J. Y.;  Yang,H. D.;  Yang,J.;  Yang,Z. L.;  Yang,Y. H.;  Yapa,N.;  Yasanthika,E.;  Youssef,N. H.;  Yu,F. M.;  Yu,Q.;  Yu,X. D.;  Yu,Y. X.;  Yu,Z. F.;  Yuan,H. S.;  Yuan,Y.;  Yurkov,A.;  Zafari,D.;  Zamora,J. C.;  Zare,R.;  Zeng,M.;  Zeng,N. K.;  Zeng,X. Y.;  Zhang,F.;  Zhang,H.;  Zhang,J. F.;  Zhang,J. Y.;  Zhang,Q. Y.;  Zhang,S. N.;  Zhang,W.;  Zhang,Y.;  Zhang,Y. X.;  Zhao,C. L.;  Zhao,H.;  Zhao,Q.;  Zhao,R. L.;  Zhou,L. W.;  Zhou,M.;  Zhurbenko,M. P.;  Zin,H. H.;  Zucconi,L.
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classification  nomenclature  scientific criticism  taxonomy  LEVEL PHYLOGENETIC CLASSIFICATION  INCORPORATING ANAMORPHIC FUNGI  FATTY-ACID-COMPOSITION  DNA-SEQUENCE DATA  NATURAL CLASSIFICATION  LEAF-LITTER  SPECIES RECOGNITION  IDENTIFICATION  NOMENCLATURE  TREE  
Bumblebees with big teeth: revising the subgenus Alpigenobombus with the good, the bad and the ugly of numts (Hymenoptera: Apidae) 期刊论文
EUROPEAN JOURNAL OF TAXONOMY, 2023, 卷号: 892, 页码: 1-65
作者:  Williams,Paul H.;  An,Jiandong;  Dorji,Phurpa;  Huang,Jiaxing;  Jaffar,Saleem;  Japoshvili,George;  Narah,Jaya;  Ren,Zongxin;  Streinzer,Martin;  Thanoosing,Chawatat;  Tian,Li;  Orr,Michael C.
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Calibrated phylogeny  coalescent  integrative  robbing  taxonomy  MITOCHONDRIAL PSEUDOGENES  HISTORICAL BIOGEOGRAPHY  COMPREHENSIVE PHYLOGENY  SPECIES DELIMITATION  BARCODES HYMENOPTERA  BEES HYMENOPTERA  DNA BARCODES  BOMBUS  DIVERSITY  CLASSIFICATION  
Multi-locus phylogeny of Bryoria reveals recent diversification and unexpected diversity in section Divaricatae 期刊论文
LICHENOLOGIST, 2023
作者:  Myllys,Leena;  Pino-Bodas,Raquel;  Velmala,Saara;  Wang,Li-Song;  Goward,Trevor
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fungal barcode  incomplete lineage sorting  ITS regions  lichen  species delimitation  SPECIES DELIMITATION  PCR PRIMERS  PARMELIACEAE  ASCOMYCOTA  DNA  EVOLUTION  TAXONOMY  LICHENS  USNEA  LECANORALES  
Species diversity of basidiomycota 期刊论文
FUNGAL DIVERSITY, 2022, 卷号: 114, 期号: 1, 页码: 281-325
作者:  He, Mao-Qiang;  Zhao, Rui-Lin;  Liu, Dong-Mei;  Denchev, Teodor T.;  Begerow, Dominik;  Yurkov, Andrey;  Kemler, Martin;  Millanes, Ana M.;  Wedin, Mats;  McTaggart, A. R.;  Shivas, Roger G.;  Buyck, Bart;  Chen, Jie;  Vizzini, Alfredo;  Papp, Viktor;  Zmitrovich, Ivan, V;  Davoodian, Naveed;  Hyde, Kevin D.
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Biodiversity  Fungi  Species number  Taxonomy  INTERNAL TRANSCRIBED SPACER  AGARICUS SECTION MINORES  SP-NOV MICROSTROMATALES  G. LUCIDUM COMPLEX  SMUT FUNGI  SP. NOV.  RIBOSOMAL DNA  PHYLOGENETIC-RELATIONSHIPS  RUST FUNGI  GEN. NOV.  
Looking for the undiscovered asexual taxa: case studies from lesser studied life modes and habitats 期刊论文
MYCOSPHERE, 2021, 卷号: 12, 期号: 1, 页码: 1186-1229
作者:  Wijayawardene,N. N.;  Phillips,A. J. L.;  Tibpromma,S.;  Dai,D. Q.;  Selbmann,L.;  Monteiro,J. S.;  Aptroot,A.;  Flakus,A.;  Rajeshkumar,K. C.;  Coleine,C.;  Pereira,D. C.;  Fan,X.;  Zhang,L.;  Maharachchikumbura,S. S. N.;  Souza,M. F.;  Kukwa,M.;  Suwannarach,N.;  Rodriguez-Flakus,P.;  Ashtekar,N.;  Dauner,L.;  Tang,L. Z.;  Jin,X. C.;  Karunarathna,S. C.
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7 new taxa    Ascomycota    DNA sequences    fungal diversity  habitat  life modes  phylogeny    taxonomy  ROCK-INHABITING FUNGI  LICHENICOLOUS FUNGI  SP-NOV  ENDOPHYTIC FUNGI  BLACK FUNGI  PYRENOCARPOUS LICHENS  PHYLOGENETIC ANALYSIS  INCERTAE SEDIS  SEQUENCE DATA  SP. NOV.  
Morpho-molecular taxonomic studies reveal a high number of endophytic fungi from Magnolia candolli and M. garrettii in China and Thailand 期刊论文
MYCOSPHERE, 2021, 卷号: 12, 期号: 1, 页码: 163-237
作者:  de Silva,N.,I;  Maharachchikumbura,S. S. N.;  Thambugala,K. M.;  Bhat,D. J.;  Karunarathna,S. C.;  Tennakoon,D. S.;  Phookamsak,R.;  Jayawardena,R. S.;  Lumyong,S.;  Hyde,K. D.
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Ascomycota  Basidiomycota  Dothideomycetes  Multi-locus sequence analysis  Sordariomycetes  Taxonomy  DNA-SEQUENCE DATA  NIGROSPORA-SPHAERICA  PHYLOGENETIC REASSESSMENT  SP-NOV  REFINED FAMILIES  PRIMER SETS  LEAF-SPOT  DIAPORTHE  DIVERSITY  PLANT