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Population structure of wild soybean (Glycine soja) based on SLAF-seq have implications for its conservation 期刊论文
PEERJ, 2023, 卷号: 11, 页码: e16415
作者:  Meng,Jing;  Yang,Guoqian;  Li,Xuejiao;  Zhao,Yan;  He,Shuilian
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Glycine soja  SLAF-seq  Genetic diversity  Population structure  SPATIAL GENETIC-STRUCTURE  TOOL SET  DIVERSITY  SIEB.  CHINESE  DNA  ZUCC.  DIFFERENTIATION  PHYLOGEOGRAPHY  HISTORY  
Chromosome-level genome assembly of Quercus variabilis provides insights into the molecular mechanism of cork thickness 期刊论文
PLANT SCIENCE, 2023, 卷号: 337
作者:  Chang,Ermei;  Guo,Wei;  Chen,Jiahui;  Zhang,Jin;  Jia,Zirui;  Tschaplinski,Timothy J.;  Yang,Xiaohan;  Jiang,Zeping;  Liu,Jianfeng
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Quercus variabilis  Chromosome-level genome  Cork thickness  Suberin biosynthesis  SUBERIN BIOSYNTHESIS  GENE  PROGRAM  TRANSCRIPTOME  ACCURATE  ENCODES  TOOL  WAX  
Pangenome analysis provides insight into the evolution of the orange subfamily and a key gene for citric acid accumulation in citrus fruits 期刊论文
NATURE GENETICS, 2023
作者:  Huang,Yue;  He,Jiaxian;  Xu,Yuantao;  Zheng,Weikang;  Wang,Shaohua;  Chen,Peng;  Zeng,Bin;  Yang,Shuizhi;  Jiang,Xiaolin;  Liu,Zishuang;  Wang,Lun;  Wang,Xia;  Liu,Shengjun;  Lu,Zhihao;  Liu,Ziang;  Yu,Huiwen;  Yue,Jianqiang;  Gao,Junyan;  Zhou,Xianyan;  Long,Chunrui;  Zeng,Xiuli;  Guo,Yong-Jie;  Zhang,Wen-Fu;  Xie,Zongzhou;  Li,Chunlong;  Ma,Zhaocheng;  Jiao,Wenbiao;  Zhang,Fei;  Larkin,Robert M.;  Krueger,Robert R.;  Smith,Malcolm W.;  Ming,Ray;  Deng,Xiuxin;  Xu,Qiang
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PHYLOGENETIC ANALYSIS  VACUOLAR PH  GENOME  RUTACEAE  ACCURATE  ORIGIN  TOOL  CLASSIFICATION  PROGRAM  RETROTRANSPOSONS  
Unveiling the holomorph and novel host records of Shearia formosa (Longiostiolaceae, Pleosporales) in China 期刊论文
NEW ZEALAND JOURNAL OF BOTANY, 2023
作者:  Madagammana,Ashani D.;  Samarakoon,Milan C.;  Phukhamsakda,Chayanard;  Bhunjun,Chitrabhanu S.;  Huanraluek,Naruemon;  Liu,Jian-Kui;  Hyde,Kevin D.
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Asexual morph  multi-loci phylogeny  Pleosporales  sexual morph  Shearia formosa  two new records  PHYLOGENETIC-RELATIONSHIPS  REFINED FAMILIES  FUNGI  CLASSIFICATION  ALIGNMENT  TAXA  TREE  TOOL  
Multi-omics analysis reveals the evolutionary origin of diterpenoid alkaloid biosynthesis pathways in Aconitum 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2023, 卷号: 65, 期号: 10, 页码: 2320-2335
作者:  Zhao,Dake;  Zhang,Ya;  Ren,Huanxing;  Shi,Yana;  Dong,Ding;  Li,Zonghang;  Cui,Guanghong;  Shen,Yong;  Mou,Zongmin;  Kennelly,Edward J.;  Huang,Luqi;  Ruan,Jue;  Chen,Suiyun;  Yu,Diqiu;  Cun,Yupeng
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Aconitum vilmorinianum  acute toxicity  biosynthetic pathway  diterpenoid alkaloid  evolutionary origin  genome assembly  PHYLOGENETIC ANALYSIS  SUPPLEMENT TREMBL  CANDIDATE GENES  R PACKAGE  TOOL  TRANSCRIPTOME  IDENTIFICATION  RANUNCULACEAE  PREDICTION  DIVERSITY  
Genomic convergence underlying high-altitude adaptation in alpine plants 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2023
作者:  Zhang,Xu;  Kuang,Tianhui;  Dong,Wenlin;  Qian,Zhihao;  Zhang,Huajie;  Landis,Jacob B. B.;  Feng,Tao;  Li,Lijuan;  Sun,Yanxia;  Huang,Jinling;  Deng,Tao;  Wang,Hengchang;  Sun,Hang
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adaptation  alpine plants  evolutionary rates  genomic convergence  greenhouse morphology  high altitude  PHYLOGENETIC ANALYSIS  ARABIDOPSIS  EVOLUTION  PROTEIN  GENE  ALIGNMENT  PROGRAM  FAMILY  TOOL  BIOSYNTHESIS  
Multiple paternally inherited chloroplast capture events associated with Taxus speciation in the Hengduan Mountains 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2023, 卷号: 189, 页码: 107915
作者:  Qin,Han-Tao;  Moller,Michael;  Milne,Richard;  Luo,Ya-Huang;  Zhu,Guang-Fu;  Li,De-Zhu;  Liu,Jie;  Gao,Lian-Ming
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Chloroplast capture  Genomic data  Hybridization  Hengduan Mountains  Phylogeny tree discordance  Taxus  POPULATION-SIZE CHANGES  TIBETAN PLATEAU MARGIN  CYTOPLASMIC INHERITANCE  HYBRID SPECIATION  GENETIC DIVERSITY  PINUS-DENSATA  R PACKAGE  TOOL SET  HYBRIDIZATION  BIODIVERSITY  
The genome of the glasshouse plant noble rhubarb (Rheum nobile) provides a window into alpine adaptation 期刊论文
COMMUNICATIONS BIOLOGY, 2023, 卷号: 6, 期号: 1, 页码: 706
作者:  Feng,Tao;  Pucker,Boas;  Kuang,Tianhui;  Song,Bo;  Yang,Ya;  Lin,Nan;  Zhang,Huajie;  Moore,Michael J.;  Brockington,Samuel F.;  Wang,Qingfeng;  Deng,Tao;  Wang,Hengchang;  Sun,Hang
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TRANSPOSABLE ELEMENTS  MOLECULAR EVOLUTION  TRANSLUCENT BRACTS  DIVERGENCE TIMES  ANNOTATION  TOOL  ALIGNMENT  POLYGONACEAE  PREDICTION  RETROTRA  
A chromosome-level reference genome of an aromatic medicinal plant Adenosma buchneroides 期刊论文
SCIENTIFIC DATA, 2023, 卷号: 10, 期号: 1, 页码: 660
作者:  Huang,Hui;  Wang,Chen;  Pei,Shengji;  Wang,Yuhua
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PHYLOGENETIC ANALYSIS  HI-C  TOOL  ANNOTATION  IDENTIFICATION  ALIGNMENT  TRANSCRIPTOME  PREDICTION  GENES  
A new lignicolous hyphomycete species of Neospadicoides in Xenospadicoidaceae (Xenospadicoidales) from Thailand 期刊论文
PHYTOTAXA, 2023, 卷号: 619, 期号: 2, 页码: 161-172
作者:  Xu,Rong-Ju;  Zhu,Ying-An;  Li,Lu;  Yu,Feng-Ming;  Boonmee,Saranyaphat;  Zhao,Qi
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asexual hyphomycetes  decaying wood  phylogeny  taxonomy  Sordariomycetes  FRESH-WATER FUNGI  PHYLOGENETIC ANALYSIS  SP-NOV  ALIGNMENT  RECORDS  CHOICE  GENERA  GEN.  TOOL