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Characterizing conflict and congruence of molecular evolution across organellar genome sequences for phylogenetics in land plants 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1125107
作者:  Tyszka,Alexa S.;  Bretz,Eric C.;  Robertson,Holly M.;  Woodcock-Girard,Miles D.;  Ramanauskas,Karolis;  Larson,Drew A.;  Stull,Gregory W.;  Walker,Joseph F.
Adobe PDF(854Kb)  |  收藏  |  浏览/下载：11/4  |  提交时间：2024/05/09
phylogenetics  plastome  mitochondrial genome  chloroplast genome  phylogenomics  combinability  phylogenetic conflict  MITOCHONDRIAL GENOMES  PENALIZED LIKELIHOOD  NUCLEOTIDE-SEQUENCES  EXTANT GYMNOSPERMS  DYNAMIC EVOLUTION  CHLOROPLAST DNA  SEED PLANTS  GENE  RATES  RECOMBINATION  
Evolutionary history of two evergreen Rhododendron species as revealed by chromosome-level genome assembly 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1123707
作者:  Wu,Xiaopei;  Zhang,Lu;  Wang,Xiuyun;  Zhang,Rengang;  Jin,Guihua;  Hu,Yanting;  Yang,Hong;  Wu,Zhenzhen;  Ma,Yongpeng;  Zhang,Chengjun;  Wang,Jihua
Adobe PDF(9308Kb)  |  收藏  |  浏览/下载：22/7  |  提交时间：2024/05/09
Rhododendron delavayi  Rhododendron irroratum  genome evolution  gene duplication  anthocyanin biosynthesis  NBS-encoding genes  MULTIPLE SEQUENCE ALIGNMENT  RICH REPEAT GENES  PHYLOGENETIC ANALYSIS  ARABIDOPSIS-THALIANA  WHOLE-GENOME  TOOL  PIGMENTATION  DUPLICATION  RESISTANCE  ACCURATE  
Plastome Evolution in the Hyperdiverse Genus Euphorbia (Euphorbiaceae) Using Phylogenomic and Comparative Analyses: Large-Scale Expansion and Contraction of the Inverted Repeat Region 期刊论文
FRONTIERS IN PLANT SCIENCE, 2021, 卷号: 12, 页码: 712064
作者:  Wei,Neng;  Perez-Escobar,Oscar A.;  Musili,Paul M.;  Huang,Wei-Chang;  Yang,Jun-Bo;  Hu,Ai-Qun;  Hu,Guang-Wan;  Grace,Olwen M.;  Wang,Qing-Feng
收藏  |  浏览/下载：92/0  |  提交时间：2022/04/02
comparative genomics  organellar evolution  phylogenetic inference  plastome rearrangement  spurge family  structural variations  COMPLETE CHLOROPLAST GENOME  RETICULATE EVOLUTION  MOLECULAR PHYLOGENY  SUBSTITUTION RATES  MULTIPLE ALIGNMENT  DNA-SEQUENCES  CLASSIFICATION  REVEAL  PLANT  RECOMBINATION  
Phylogenomic Analysis and Dynamic Evolution of Chloroplast Genomes in Salicaceae 期刊论文
FRONTIERS IN PLANT SCIENCE, 2017, 卷号: 8, 页码: 01050
作者:  Huang, Yuan;  Wang, Jun;  Yang, Yongping;  Fan, Chuanzhu;  Chen, Jiahui
浏览  |  Adobe PDF(2695Kb)  |  收藏  |  浏览/下载：192/45  |  提交时间：2017/07/31
Chloroplast Genome  Phylogenomics  Phylogenetic Incongruence  Nupt  Evolution  Organellar Horizontal Gene Transfer  Salicaceae  
LTRtype, an Efficient Tool to Characterize Structurally Complex LTR Retrotransposons and Nested Insertions on Genomes 期刊论文
FRONTIERS IN PLANT SCIENCE, 2017, 卷号: 8, 页码: 1
作者:  Zeng, Fan-Chun;  Zhao, You-Jie;  Zhang, Que-Jie;  Gao, Li-Zhi
浏览  |  Adobe PDF(2129Kb)  |  收藏  |  浏览/下载：145/35  |  提交时间：2017/06/01
Ltrtype  Ltr Retrotransposons  Nested Insertions  Structural Complexity  Genome Evolution