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Genetic innovations: Transposable element recruitment and de novo formation lead to the birth of orphan genes in the rice genome 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 页码: 11
作者:  Jin, Gui-Hua;  Zhou, Yan-Li;  Yang, Hong;  Hu, Yan-Ting;  Shi, Yong;  Li, Ling;  Siddique, Abu N.;  Liu, Chang-Ning;  Zhu, An-Dan;  Zhang, Cheng-Jun;  Li, De-Zhu
浏览  |  Adobe PDF(845Kb)  |  收藏  |  浏览/下载：291/107  |  提交时间：2020/03/17
comparative genomics  origin  orphan gene  transposable element  
Alternative splicing coupled to nonsense-mediated mRNA decay contributes to the high-altitude adaptation of maca (Lepidium meyenii) 期刊论文
GENE, 2019, 卷号: 694, 页码: 7-18
作者:  Shi, Yong;  Su, Zechun;  Yang, Hong;  Wang, Wenzhi;  Jin, Guihua;  He, Guiqing;  Siddique, Abu Nasar;  Zhang, Liangsheng;  Zhu, Andan;  Xue, Runguang;  Zhang, Chengjun
浏览  |  Adobe PDF(1643Kb)  |  收藏  |  浏览/下载：250/29  |  提交时间：2019/07/29
Alpine plants  Post-transcriptome  Intron retention  Alternative 3 ' splice site  Long non-coding RNA  Positive selection  
Rapid evolution of protein diversity by de novo origination in Oryza 期刊论文
NATURE ECOLOGY & EVOLUTION, 2019, 卷号: 3, 期号: 4, 页码: 679-690
作者:  Zhang, Li;  Ren, Yan;  Yang, Tao;  Li, Guangwei;  Chen, Jianhai;  Gschwend, Andrea R.;  Yu, Yeisoo;  Hou, Guixue;  Zi, Jin;  Zhou, Ruo;  Wen, Bo;  Zhang, Jianwei;  Chougule, Kapeel;  Wang, Muhua;  Copetti, Dario;  Peng, Zhiyu;  Zhang, Chengjun;  Zhang, Yong;  Ouyang, Yidan;  Wing, Rod A.;  Liu, Siqi;  Long, Manyuan
浏览  |  Adobe PDF(1636Kb)  |  收藏  |  浏览/下载：234/48  |  提交时间：2019/07/29
The draft genome assembly of Rhododendron delavayi Franch. var. delavayi 期刊论文
GIGASCIENCE, 2017, 卷号: 6, 期号: 10, 页码: 1
作者:  Zhang, Lu;  Xu, Pengwei;  Cai, Yanfei;  Ma, Lulin;  Li, Shifeng;  Li, Shufa;  Xie, Weijia;  Song, Jie;  Peng, Lvchun;  Yan, Huijun;  Zou, Ling;  Ma, Yongpeng;  Zhang, Chengjun;  Gao, Qiang;  Wang, Jihua
浏览  |  Adobe PDF(1588Kb)  |  收藏  |  浏览/下载：278/65  |  提交时间：2017/10/23
Rhododendron Delavayi  Genomics  Genome Assembly  Annotation  
Contradiction between Plastid Gene Transcription and Function Due to Complex Posttranscriptional Splicing: An Exemplary Study of ycf15 Function and Evolution in Angiosperms 期刊论文
PLOS ONE, 2013, 卷号: 8, 期号: 3, 页码: e59620
作者:  Shi, Chao;  Liu, Yuan;  Huang, Hui;  Xia, En-Hua;  Zhang, Hai-Bin;  Gao, Li-Zhi
浏览  |  Adobe PDF(4059Kb)  |  收藏  |  浏览/下载：392/64  |  提交时间：2013/06/08
Chloroplast Genome Sequence  Complete Nucleotide-sequence  Independent Transfers  Horizontal Transfer  Maximum-likelihood  Flowering Plants  Rna-metabolism  Nucleus  Dna  Organization  
gKaKs: The pipeline for genome level Ka/Ks calculation 期刊论文
Bioinformatics, 2013, 期号: doi:10.1093
作者:  Chengjun Zhang;  Jun Wang;  Manyuan Long;  Chuanzhu Fan
Adobe PDF(99Kb)  |  收藏  |  浏览/下载：232/48  |  提交时间：2014/11/10
基于Illumina RNA-Seq短序列的转录组从头组装软件比较与优化(英文) 期刊论文
植物分类与资源学报, 2012, 期号: 5, 页码: 487-501
赵磊; Zachary LARSON-RABIN; 陈斯云; 郭振华
Adobe PDF(1675Kb)  |  收藏  |  浏览/下载：606/138  |  提交时间：2012/12/28
高通量  二代测序  转录组  从头组装  优化