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Single-base methylome analysis reveals dynamic changes of genome-wide DNA methylation associated with rapid stem growth of woody bamboos 期刊论文
PLANTA, 2022, 卷号: 256, 期号: 3, 页码: 53
作者:  Niu, Liang-Zhong;  Xu, Wei;  Ma, Peng-Fei;  Guo, Zhen-Hua;  Li, De-Zhu
浏览  |  Adobe PDF(3169Kb)  |  收藏  |  浏览/下载：25/5  |  提交时间：2024/04/30
DNA methylation  Gene expression  Internode elongation  Jasmonic acid  Woody bamboos  PHENYLALANINE AMMONIA-LYASE  MOLECULAR CHARACTERIZATION  CYTOSINE METHYLTRANSFERASE  INTERNODE ELONGATION  TRANSCRIPTION FACTOR  H3 LYSINE-9  ARABIDOPSIS  EXPRESSION  DEMETHYLATION  PROTEIN  
Differential expressions of anthocyanin synthesis genes underlie flower color divergence in a sympatric Rhododendron sanguineum complex 期刊论文
BMC PLANT BIOLOGY, 2021, 卷号: 21, 期号: 1, 页码: 204
作者:  Ye,Lin-Jiang;  Moller,Michael;  Luo,Ya-Huang;  Zou,Jia-Yun;  Zheng,Wei;  Wang,Yue-Hua;  Liu,Jie;  Zhu,An-Dan;  Hu,Jin-Yong;  Li,De-Zhu;  Gao,Lian-Ming
浏览  |  Adobe PDF(1937Kb)  |  收藏  |  浏览/下载：223/121  |  提交时间：2022/04/02
Anthocyanin synthesis  Comparative transcriptomics  Flower coloration  Gene expression  Rhododendron sanguineum complex  Sympatric speciation  RNA-SEQ DATA  TRANSCRIPTOME ANALYSIS  ANALYSIS REVEALS  BIOSYNTHESIS  GENERATION  ALIGNMENT  FLAVONOL  COPIGMENTATION  IDENTIFICATION  ACCUMULATION  
Simultaneous diversification of Polypodiales and angiosperms in the Mesozoic 期刊论文
CLADISTICS, 2021, 卷号: 37, 期号: 5, 页码: 518-539
作者:  Du,Xin-Yu;  Lu,Jin-Mei;  Zhang,Li-Bing;  Wen,Jun;  Kuo,Li-Yaung;  Mynssen,Claudine M.;  Schneider,Harald;  Li,De-Zhu
浏览  |  Adobe PDF(1028Kb)  |  收藏  |  浏览/下载：86/26  |  提交时间：2022/04/02
CHLOROPLAST GENOME SEQUENCE  EARLY CRETACEOUS FERNS  EUPOLYPOD II FERNS  OLDEST MACROFOSSIL  RAPID RADIATION  1ST FOSSIL  SP-NOV.  EVOLUTION  PHYLOGENY  FAMILY  
Repeated intercontinental migrations and recurring hybridizations characterise the evolutionary history of yew (Taxus L.) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2020
作者:  Moller, Michael;  Liu, Jie;  Li, Yan;  Li, Jian-Hua;  Ye, Lin-Jiang;  Mill, Robert;  Thomas, Philip;  Li, De-Zhu;  Gao, Lian-Ming
浏览  |  Adobe PDF(6464Kb)  |  收藏  |  浏览/下载：111/30  |  提交时间：2021/01/05
GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes 期刊论文
GENOME BIOLOGY, 2020
作者:  Jin, Jian-Jun;  Yu, Wen-Bin;  Yang, Jun-Bo;  Song, Yu;  dePamphilis, Claude W.;  Yi, Ting-Shuang;  Li, De-Zhu
浏览  |  Adobe PDF(1951Kb)  |  收藏  |  浏览/下载：225/18  |  提交时间：2021/01/05
Comparative analysis of plastid genomes within the Campanulaceae and phylogenetic implications 期刊论文
PLOS ONE, 2020
作者:  Li, Chun-Jiao;  Wang, Ruo-Nan;  Li, De-Zhu
浏览  |  Adobe PDF(2725Kb)  |  收藏  |  浏览/下载：105/40  |  提交时间：2021/01/05
ddRAD analyses reveal a credible phylogenetic relationship of the four main genera of Bambusa-Dendrocalamus-Gigantochloa complex (Poaceae: Bambusoideae) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2020
作者:  Liu, Jing-Xia;  Zhou, Meng-Yuan;  Yang, Guo-Qian;  Zhang, Yu-Xiao;  Ma, Peng-Fei;  Guo, Cen;  Vorontsova, Maria S.;  Li, De-Zhu
浏览  |  Adobe PDF(2130Kb)  |  收藏  |  浏览/下载：90/17  |  提交时间：2021/01/05
Genetic innovations: Transposable element recruitment and de novo formation lead to the birth of orphan genes in the rice genome 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 页码: 11
作者:  Jin, Gui-Hua;  Zhou, Yan-Li;  Yang, Hong;  Hu, Yan-Ting;  Shi, Yong;  Li, Ling;  Siddique, Abu N.;  Liu, Chang-Ning;  Zhu, An-Dan;  Zhang, Cheng-Jun;  Li, De-Zhu
浏览  |  Adobe PDF(845Kb)  |  收藏  |  浏览/下载：293/107  |  提交时间：2020/03/17
comparative genomics  origin  orphan gene  transposable element  
Phylogenomic analysis reveals multiple evolutionary origins of selfing from outcrossing in a lineage of heterostylous plants 期刊论文
NEW PHYTOLOGIST, 2019, 卷号: 224, 期号: 3, 页码: 1290-1303
作者:  Zhong, Li;  Barrett, Spencer C. H.;  Wang, Xin-Jia;  Wu, Zhi-Kun;  Sun, Hua-Ying;  Li, De-Zhu;  Wang, Hong;  Zhou, Wei
浏览  |  Adobe PDF(1748Kb)  |  收藏  |  浏览/下载：235/50  |  提交时间：2020/03/26
floral evolution  genetic diversity  heterostyly  homostyly  mating systems  phylogenomics  Primula  selfing  
Genome Sequences Provide Insights into the Reticulate Origin and Unique Traits of Woody Bamboos 期刊论文
MOLECULAR PLANT, 2019, 卷号: 12, 期号: 10, 页码: 1353-1365
作者:  Guo, Zhen-Hua;  Ma, Peng-Fei;  Yang, Guo-Qian;  Hu, Jin-Yong;  Liu, Yun-Long;  Xia, En-Hua;  Zhong, Mi-Cai;  Zhao, Lei;  Sun, Gui-Ling;  Xu, Yu-Xing;  Zhao, You-Jie;  Zhang, Yi-Chi;  Zhang, Yu-Xiao;  Zhang, Xue-Mei;  Zhou, Meng-Yuan;  Guo, Ying;  Guo, Cen;  Liu, Jing-Xia;  Ye, Xia-Ying;  Chen, Yun-Mei;  Yang, Yang;  Hang, Bin;  Lin, Choun-Sea;  Lu, Ying;  Li, De-Zhu
浏览  |  Adobe PDF(1655Kb)  |  收藏  |  浏览/下载：372/67  |  提交时间：2019/12/20
Bambusoideae  polyploidization  comparative genomics  subgenome evolution  flowering