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KIB OpenIR
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Does IR-loss promote plastome structural variation and sequence evolution? 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 13, 页码: 888049
作者:  Wang, Zi-Xun;  Wang, Ding-Jie;  Yi, Ting-Shuang
浏览  |  Adobe PDF(2423Kb)  |  收藏  |  浏览/下载：4/2  |  提交时间：2024/08/21
plastid genome evolution  structural variation  inverted repeat region loss  substitution rate  comparative genomics  CHLOROPLAST GENOME SEQUENCE  INVERTED REPEAT  NUCLEOTIDE SUBSTITUTION  PHYLOGENETIC ANALYSIS  MOLECULAR EVOLUTION  NONCODING RNAS  RATES  REARRANGEMENTS  ORGANIZATION  CUPRESSOPHYTES  
New Insights Into the Plastome Evolution of the Millettioid/Phaseoloid Clade (Papilionoideae, Leguminosae) 期刊论文
FRONTIERS IN PLANT SCIENCE, 2020
作者:  Oyebanji, Oyetola;  Zhang, Rong;  Chen, Si-Yun;  Yi, Ting-Shuang
浏览  |  Adobe PDF(1974Kb)  |  收藏  |  浏览/下载：128/47  |  提交时间：2021/01/05
GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes 期刊论文
GENOME BIOLOGY, 2020
作者:  Jin, Jian-Jun;  Yu, Wen-Bin;  Yang, Jun-Bo;  Song, Yu;  dePamphilis, Claude W.;  Yi, Ting-Shuang;  Li, De-Zhu
浏览  |  Adobe PDF(1951Kb)  |  收藏  |  浏览/下载：265/22  |  提交时间：2021/01/05
Plastome Reduction in the Only Parasitic Gymnosperm Parasitaxus Is Due to Losses of Photosynthesis but Not Housekeeping Genes and Apparently Involves the Secondary Gain of a Large Inverted Repeat 期刊论文
GENOME BIOLOGY AND EVOLUTION, 2019, 卷号: 11, 期号: 10, 页码: 2789-2796
作者:  Qu, Xiao-Jian;  Fan, Shou-Jin;  Wicke, Susann;  Yi, Ting-Shuang
Adobe PDF(1214Kb)  |  收藏  |  浏览/下载：179/48  |  提交时间：2020/03/18
plastome  parasitism  mycoheterotrophy  gene loss  Parasitaxus  
PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes 期刊论文
PLANT METHODS, 2019, 卷号: 15, 页码: 12
作者:  Qu, Xiao-Jian;  Moore, Michael J.;  Li, De-Zhu;  Yi, Ting-Shuang
浏览  |  Adobe PDF(1302Kb)  |  收藏  |  浏览/下载：312/32  |  提交时间：2019/07/29
PGA  Plastome  Batch annotation  Accuracy  BLAST  Software  Algorithms  
Origin of angiosperms and the puzzle of the Jurassic gap 期刊论文
NATURE PLANTS, 2019, 卷号: 5, 期号: 5, 页码: 461-470
作者:  Li, Hong-Tao;  Yi, Ting-Shuang;  Gao, Lian-Ming;  Ma, Peng-Fei;  Zhang, Ting;  Yang, Jun-Bo;  Gitzendanner, Matthew A.;  Fritsch, Peter W.;  Cai, Jie;  Luo, Yang;  Wang, Hong;  van der Bank, Michelle;  Zhang, Shu-Dong;  Wang, Qing-Feng;  Wang, Jian;  Zhang, Zhi-Rong;  Fu, Chao-Nan;  Yang, Jing;  Hollingsworth, Peter M.;  Chase, Mark W.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Li, De-Zhu
浏览  |  Adobe PDF(1707Kb)  |  收藏  |  浏览/下载：414/89  |  提交时间：2019/07/29
Multiple measures could alleviate long-branch attraction in phylogenomic reconstruction of Cupressoideae (Cupressaceae) 期刊论文
SCIENTIFIC REPORTS, 2017, 卷号: 7
作者:  Qu, Xiao-Jian;  Jin, Jian-Jun;  Chaw, Shu-Miaw;  Li, De-Zhu;  Yi, Ting-Shuang
浏览  |  Adobe PDF(1287Kb)  |  收藏  |  浏览/下载：216/66  |  提交时间：2017/04/18