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Progress, challenge and prospect of plant plastome annotation 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1166140
Authors:  Qu,Xiao-Jian;  Zou,Dan;  Zhang,Rui-Yu;  Stull,Gregory W.;  Yi,Ting-Shuang
View  |  Adobe PDF(12821Kb)  |  Favorite  |  View/Download:19/6  |  Submit date:2024/05/09
annotation standards  chloroplast genome  plastome  protein structure  pseudogenes  RNA-editing genes  MITOCHONDRIAL GENES  RNA  GENOME  SEQUENCE  CHLOROPLASTS  TRANSLATION  
Plastid RNA editing reduction accompanied with genetic variations in Cymbidium, a genus with diverse lifestyle modes 期刊论文
PLANT DIVERSITY, 2022, 卷号: 44, 期号: 3, 页码: 316-321
Authors:  Zhe, Mengqing;  Zhang, Le;  Liu, Fang;  Huang, Yiwei;  Fan, Weishu;  Yang, Junbo;  Zhu, Andan
Favorite  |  View/Download:244/0  |  Submit date:2022/07/15
RNA editing  Plastomes  ndh genes  Lifestyle  
Plastid RNA editing reduction accompanied with genetic variations in Cymbidium, a genus with diverse lifestyle modes 期刊论文
PLANT DIVERSITY, 2022, 卷号: 44, 期号: 3, 页码: 316-321
Authors:  Zhe, Mengqing;  Zhang, Le;  Liu, Fang;  Huang, Yiwei;  Fan, Weishu;  Yang, Junbo;  Zhu, Andan
View  |  Adobe PDF(1302Kb)  |  Favorite  |  View/Download:21/4  |  Submit date:2024/04/30
RNA editing  Plastomes  ndh genes  Lifestyle  CRASSULACEAN ACID METABOLISM  ORCHIDACEAE  ALIGNMENT  GENOME  
Organelle Genomes and Transcriptomes of Nymphaea Reveal the Interplay between Intron Splicing and RNA Editing 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2021, 卷号: 22, 期号: 18, 页码: 9842
Authors:  He,Zheng-Shan;  Zhu,Andan;  Yang,Jun-Bo;  Fan,Weishu;  Li,De-Zhu
Favorite  |  View/Download:77/0  |  Submit date:2022/04/02
Nymphaea  organelle genomes  transcriptomes  intron splicing  RNA editing  MESSENGER-RNA  PLANT-MITOCHONDRIA  WHEAT  CHLOROPLASTS  ACCURATE  SITES  EXPRESSION  EVOLUTION  ALIGNMENT  PROTEINS  
Organellomic data sets confirm a cryptic consensus on (unrooted) land-plant relationships and provide new insights into bryophyte molecular evolution 期刊论文
AMERICAN JOURNAL OF BOTANY, 2020, 卷号: 107, 期号: 1, 页码: 126-138
Authors:  Del Rio, Cedric;  Wang, Teng-Xiang;  Liu, Jia;  Liang, Shui-Qing;  Spicer, Robert A.;  Wu, Fei-Xiang;  Zhou, Zhe-Kun;  Su, Tao
Favorite  |  View/Download:196/0  |  Submit date:2020/03/18
Anthocerotophyta (hornworts)  Bryophyta (mosses)  embryophyte relationships  long-branch outgroups  Marchantiophyta (liverworts)  mycoheterotrophic bryophytes  organellar evolution  phylogenetic incongruence  RNA editing  tree rooting  
Mitochondrial genome from Andreaea wangiana reveals structural conservatism and a trend of size reduction in mosses 期刊论文
BRYOLOGIST, 2019, 卷号: 122, 期号: 4, 页码: 597-606
Authors:  Huang, Wen-Zhuan;  Ma, Wen-Zhang;  Schneider, Harald;  Yu, Ying;  Wu, Yu-Huan
View  |  Adobe PDF(951Kb)  |  Favorite  |  View/Download:202/37  |  Submit date:2020/03/26
Andreaeaceae  reduction of mitogenome size  RNA editing sites  Setaphyta  simple repeat sequence  structural conservatism  
Complete loss of RNA editing from the plastid genome and most highly expressed mitochondrial genes of Welwitschia mirabilis 期刊论文
SCIENCE CHINA-LIFE SCIENCES, 2019, 卷号: 62, 期号: 4, 页码: 498-506
Authors:  Fan, Weishu;  Guo, Wenhu;  Funk, Lexis;  Mower, Jeffrey P.;  Zhu, Andan
View  |  Adobe PDF(514Kb)  |  Favorite  |  View/Download:152/33  |  Submit date:2019/07/29
RNA editing  massive loss  expression levels  organelle genomes  Welwitschia  
Complete chloroplast genome sequence of Magnolia kwangsiensis (Magnoliaceae): implication for DNA barcoding and population genetics 期刊论文
GENOME, 2011, 卷号: 54, 期号: 8, 页码: 663-673
Authors:  Kuang, Dai-Yong;  Wu, Hong;  Wang, Ya-Ling;  Gao, Lian-Ming;  Zhang, Shou-Zhou;  Lu, Lu
Adobe PDF(643Kb)  |  Favorite  |  View/Download:618/239  |  Submit date:2012/03/16
Magnolia Kwangsiensis  Plastome  Dna Barcoding  Cpssr  Rna Editing