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中国科学院昆明植物研究所知识管理系统
Knowledge Management System of Kunming Institute of Botany,CAS
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昆明植物所硕博研究... [80]
共享文献 [64]
中国科学院东亚植物... [57]
植物化学与西部植物... [34]
资源植物与生物技术... [32]
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许建初 [14]
刘海洋 [11]
Yang Jing [10]
李德铢 [9]
Qin XuJie [9]
Sun Hang [8]
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云南植物研究 [7]
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GST,p < 0.001) and low levels of seed-based gene flow. C. debaoensis (Cycadaceae) is an endangered species restricted to the border of Guangxi and Yunnan province in southwest China. This species has been classified into two types: sand and karst, according to the soil matrix they grow on. We examined chloroplast sequence variation of the cpDNA sequences from 11 populations of this species. Significant population genetic differentiation was detected (GST= 0.684 and FST = 0.74160). There was marked genetic differentiation between populations in the sand and karst regions and no expansion was detected. Climate changes during glacial periods have had significant effects on the current distribution of cycads. The molecular phylogenetic data, together with the geographic distribution of the haplotypes, suggest that C. debaoensis experienced range contraction during glacial periods, and that the current populations are still confined to the original refugia in southwest China which have favorable habitats in glacial period. These results imply that small refugia were maintained in both sand and karst regions during the LGM (last glacial maximum). This species had no postglacial recolonization and only stayed in these refugia up to now. The low within-population diversity of C. debaoensis suggests that there were strong bottleneck events or founder effects within each separate region during the Quaternary climatic oscillations. Relatively high genetic and haplotype diversities were detected in the newly discovered populations, which located at intermediate locality of sand regions and had morphological variation; this is probably the consequence of the admixture of different haplotypes colonizing the area from separate sources. C. micholitzii occurs in the Annan Highlands in central Vietnam near the Laos border. C. bifida occurs in North Vietnam; its distribution extends across the border into adjacent localities in Guangxi and Yunnan in China. For the comparability between them,theywere considered as the same species C. micholitzii by many academicians. The cpDNA sequences from 11 populations showed that these very controversial species, C. micholitzii and C. bifida, is paraphyletic and should belong to the same species C. micholitzii. AMOVA analysis showed that the component of among-population within region/species (76.46%) was unexpectedly larger than the among-species/region component (14.97%), which also indicates that there is no justification for recognizing two species as C. micholitzii and C. bifida. This hypothesis was also supported by the geological data, especially the neotectonic history of the indo-china block, which started to move south since Oligocene and cause the geographic isolation of these two groups. Therefore, the most likely explanation to the phenotypic similarities between these two groups may be the retention of ancestral polymorphisms in the paraphyletic group due to incomplete lineage sorting. Furthermore, the similarities may also be ascribed to pollen-mediated gene flow among geographically proximate populations and/or phenotypic convergence under similar selection schemes in the same region. C.micholitzi had the higest genetic diversity (HT = 0.980,) and genetic differentiation (GST = 0.830, NST = 0.915) among the C. micholitzii complex. The high genetic diversity might be attributed to its long evolutionary history, highly diverse habitats. The ineffective mode of seed dispersal and dramatic neotectonic movement in the distribution range of this species could result in the high genetic differentiation. 2. Phylogeographic analysis based on nuclear ribosomal sequences, We sequenced the nrDNA ITS in all 27 populations sampled, 7 haplotypes were identified, among which C. micholitzii had 6, while C. multipinnata, C. longipetiolula and C. debaoensis shared the remaining one. Compared to chloroplast genes, nuclear genes had higher correlation between genetic and geographical distance, but lower interspecies differentiation (54.42% vs 25.24%). Phylogeographical structure of C. micholitzii and C.bifida based on ITS Variation was consistent with the morphology differentiation. This similar in nuclear gene should be ascribed to pollen-mediated gene flow among geographically proximate populations.Long-distance gene flow over the two groups was clearly interrupted, which brought on the nrDNA genetic differenciation between the geographically isolated groups, to a certain extent affected the morphological variation. 3. Interspecies relationships among Cycas micholitzii complex, We analysed chloroplast sequence variation of the atpB-rbcL and psbA-trnH intergenic spacers in 27 populations sampled of C. micholitzii complex, AMOVA analysis showed that the component of among-species/region component (59.21%). However, phylogenic analysis showed that the haplotypes of C. micholitzii complex couldn`t grouped into four clusters closely corresponding to the narrowly defined C. micholitzi, C. multipinnata, C. debaoensis and C. longipetiolula. We concluded that the conflict may result from several factors: firstly incomplete lineage sorting of C. micholitzii; secondly hybridization/introgression of sympatrically cycads, which would be supported by evidence base on nrDNA ITS sequences; thirdly intramolecular recombination in cpDNA of cycads; eventually the neotectonic movement in the distribution range of this 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of State Key Laboratory of Phytochemistry and Plant Resources in West China[P2017-ZZ04]","jscount":"1","jsurl":"/simple-search?field1=all&rpp=10&accurate=false&advanced=false&sort_by=2&isNonaffiliated=false&search_type=-1&query1=Myrtaceae&order=desc&&fq=dc.project.title_filter%3AFoundation%5C+of%5C+State%5C+Key%5C+Laboratory%5C+of%5C+Phytochemistry%5C+and%5C+Plant%5C+Resources%5C+in%5C+West%5C+China%5C%5BP2017%5C-ZZ04%5C%5D"},{"jsname":"Friends of the Royal Botanic Gardens Victoria","jscount":"1","jsurl":"/simple-search?field1=all&rpp=10&accurate=false&advanced=false&sort_by=2&isNonaffiliated=false&search_type=-1&query1=Myrtaceae&order=desc&&fq=dc.project.title_filter%3AFriends%5C+of%5C+the%5C+Royal%5C+Botanic%5C+Gardens%5C+Victoria"},{"jsname":"German Academic Exchange Service 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Systematics and Biogeography of Aralia L. (Araliaceae):Revision of Aralia Sects. Aralia, Humiles, Nanae, andSciadodendron
期刊论文
出版物, 3111, 卷号: 57, 期号: 0, 页码: 1-172
Authors:
Jun Wen
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Submit date：2017/07/24
Aralia
Aralia Sect. Aralia
Aralia Sect. Dimorphanthus
Aralia Sect. Humiles
Aralia Sect. Nanae
Aralia Sect. pentapanax
Aralia Sect. Sciadodendron
Biogeography
Araliaceae
Systematics
Systema Angiospermarum
期刊论文
出版物, 3111, 页码: 1—21
Authors:
Zuo Z(作者)
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Submit date：2017/07/19
台湾北部福山地区亚热带雨林幼苗之研究
期刊论文
出版物, 3111, 页码: 1-100
Authors:
吕佳陵
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Submit date：2017/07/19
Colletotrichum dracaenigenum, a new species on Dracaena fragrans
期刊论文
PHYTOTAXA, 2021, 卷号: 491, 期号: 2, 页码: 143-157
Authors:
Chaiwan,Napalai
;
Tibpromma,Saowaluck
;
Jayawardena,Ruvishika S.
;
Mapook,Ausana
;
Wanasinghe,Dhanushka N.
;
Mortimer,Peter E.
;
Lumyong,Saisamorn
;
Hyde,Kevin D.
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Submit date：2022/04/02
Morphology
Multi-locus
Novel species
Phylogeny
Taxonomy
FUNGI
DIVERSITY
SPP.
ANTHRACNOSE
FAMILIES
GENERA
A natural acylphloroglucinol triggered antiproliferative possessions in HEL cells by impeding STAT3 signaling and attenuating angiogenesis in transgenic zebrafish model
期刊论文
BIOMEDICINE & PHARMACOTHERAPY, 2021, 卷号: 141, 页码: 111877
Authors:
Hu,Mi
;
Varier,Krishnapriya M.
;
Li,Zhicao
;
Qin,Xujie
;
Rao,Qing
;
Song,Jingrui
;
Hu,Anling
;
Hang,Yubing
;
Yuan,Chunmao
;
Gajendran,Babu
;
Shu,Liping
;
Wen,Min
;
Li,Yanmei
;
Liu,Haiyang
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Acylphloroglucinol
HEL cells
Intrinsic apoptotic pathway
Anti-angiogenesis
STAT3
Flk-1
CALLISTEMON-CITRINUS
TUMOR ANGIOGENESIS
DNA
DERIVATIVES
ANTICANCER
APOPTOSIS
ACTIVATION
INHIBITORS
TARGETS
LEAVES
Phylogenetic patterns suggest frequent multiple origins of secondary metabolites across the seed-plant 'tree of life'
期刊论文
NATIONAL SCIENCE REVIEW, 2021
Authors:
Zhang,Yongzeng
;
Deng,Tao
;
Sun,Lu
;
Landis,Jacob B.
;
Moore,Michael J.
;
Wang,Hengchang
;
Wang,Yuehua
;
Hao,Xiaojiang
;
Chen,Jijun
;
Li,Shenghong
;
Xu,Maonian
;
Puno,Pema-Tenzin
;
Raven,Peter H.
;
Sun,Hang
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Submit date：2023/09/08
Tylopilus glutinosus, a new species of Boletaceae from Bangladesh
期刊论文
NORDIC JOURNAL OF BOTANY, 2021, 卷号: 39, 期号: 11
Authors:
Hosen,Md. Iqbal
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Dipterocarpaceae
phylogeny
purple bolete
South Asian bolete
taxonomy
GENUS
TAXA
ASIA
Polymethylated acylphloroglucinols from Rhodomyrtus tomentosa exert acetylcholinesterase inhibitory effects
期刊论文
BIOORGANIC CHEMISTRY, 2021, 卷号: 107, 页码: 104519
Authors:
Qin,Xu-Jie
;
Liu,Hui
;
Li,Pan-Pan
;
Ni,Wei
;
He,Li
;
Khan,Afsar
;
Hao,Xiao-Jiang
;
Liu,Hai-Yang
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Rhodomyrtus tomentosa
Polymethylated acyphloroglucinols
AChE inhibitory effect
Molecular docking
PHLOROGLUCINOL MEROTERPENOIDS
LEAVES
DERIVATIVES
TWIGS
BETA
Multi-Gene Phylogeny and Morphology Reveal Haplohelminthosporium gen. nov. and Helminthosporiella gen. nov. Associated with Palms in Thailand and A Checklist for Helminthosporium Reported Worldwide
期刊论文
LIFE-BASEL, 2021, 卷号: 11, 期号: 5, 页码: 454
Authors:
Konta,Sirinapa
;
Hyde,Kevin D.
;
Karunarathna,Samantha C.
;
Mapook,Ausana
;
Senwanna,Chanokned
;
Dauner,Lucas A. P.
;
Nanayakkara,Chandrika M.
;
Xu,Jianchu
;
Tibpromma,Saowaluck
;
Lumyong,Saisamorn
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Submit date：2022/04/02
4 new taxa
Massarinaceae
morphology
multi-genes
palm fungi
Thailand
MOLECULAR PHYLOGENY
YUNNAN PROVINCE
SIMILAR GENERA
FAM. NOV.
FUNGI
PLEOSPORALES
DNA
DIVERSITY
CHINA
MASSARINACEAE
The Global Soil Mycobiome consortium dataset for boosting fungal diversity research
期刊论文
FUNGAL DIVERSITY, 2021, 卷号: 111, 期号: 1, 页码: 573-588
Authors:
Tedersoo,Leho
;
Mikryukov,Vladimir
;
Anslan,Sten
;
Bahram,Mohammad
;
Khalid,Abdul Nasir
;
Corrales,Adriana
;
Agan,Ahto
;
Vasco-Palacios,Aida-M
;
Saitta,Alessandro
;
Antonelli,Alexandre
;
Rinaldi,Andrea C.
;
Verbeken,Annemieke
;
Sulistyo,Bobby P.
;
Tamgnoue,Boris
;
Furneaux,Brendan
;
Ritter,Camila Duarte
;
Nyamukondiwa,Casper
;
Sharp,Cathy
;
Marin,Cesar
;
Dai,D. Q.
;
Gohar,Daniyal
;
Sharmah,Dipon
;
Biersma,Elisabeth Machteld
;
Cameron,Erin K.
;
De Crop,Eske
;
Otsing,Eveli
;
Davydov,Evgeny A.
;
Albornoz,Felipe E.
;
Brearley,Francis Q.
;
Buegger,Franz
;
Gates,Genevieve
;
Zahn,Geoffrey
;
Bonito,Gregory
;
Hiiesalu,Indrek
;
Hiiesalu,Inga
;
Zettur,Irma
;
Barrio,Isabel C.
;
Parn,Jaan
;
Heilmann-Clausen,Jacob
;
Ankuda,Jelena
;
Kupagme,John Y.
;
Sarapuu,Joosep
;
Macia-Vicente,Jose G.
;
Fovo,Joseph Djeugap
;
Geml,Jozsef
;
Alatalo,Juha M.
;
Alvarez-Manjarrez,Julieta
;
Monkai,Jutamart
;
Poldmaa,Kadri
;
Runnel,Kadri
;
Adamson,Kalev
;
Brathen,Kari A.
;
Pritsch,Karin
;
Tchan,Kassim,I
;
Armolaitis,Kestutis
;
Hyde,Kevin D.
;
Newsham,Kevin K.
;
Panksep,Kristel
;
Adebola,Lateef A.
;
Lamit,Louis J.
;
Saba,Malka
;
da Silva Caceres,Marcela E.
;
Tuomi,Maria
;
Gryzenhout,Marieka
;
Bauters,Marijn
;
Balint,Miklos
;
Wijayawardene,Nalin
;
Hagh-Doust,Niloufar
;
Yorou,Nourou S.
;
Kurina,Olavi
;
Mortimer,Peter E.
;
Meidl,Peter
;
Nilsson,R. Henrik
;
Puusepp,Rasmus
;
Casique-Valdes,Rebeca
;
Drenkhan,Rein
;
Garibay-Orijel,Roberto
;
Godoy,Roberto
;
Alfarraj,Saleh
;
Rahimlou,Saleh
;
Polme,Sergei
;
Dudov,Sergey,V
;
Mundra,Sunil
;
Ahmed,Talaat
;
Netherway,Tarquin
;
Henkel,Terry W.
;
Roslin,Tomas
;
Fedosov,Vladimir E.
;
Onipchenko,Vladimir G.
;
Yasanthika,W. A. Erandi
;
Lim,Young Woon
;
Piepenbring,Meike
;
Klavina,Darta
;
Koljalg,Urmas
;
Abarenkov,Kessy
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Submit date：2022/04/02
Soil fungi
Global dataset
PacBio sequencing
Fungal richness
IDENTIFICATION
