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Characterizing conflict and congruence of molecular evolution across organellar genome sequences for phylogenetics in land plants 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1125107
作者:  Tyszka,Alexa S.;  Bretz,Eric C.;  Robertson,Holly M.;  Woodcock-Girard,Miles D.;  Ramanauskas,Karolis;  Larson,Drew A.;  Stull,Gregory W.;  Walker,Joseph F.
浏览  |  Adobe PDF(854Kb)  |  收藏  |  浏览/下载：8/3  |  提交时间：2024/05/09
phylogenetics  plastome  mitochondrial genome  chloroplast genome  phylogenomics  combinability  phylogenetic conflict  MITOCHONDRIAL GENOMES  PENALIZED LIKELIHOOD  NUCLEOTIDE-SEQUENCES  EXTANT GYMNOSPERMS  DYNAMIC EVOLUTION  CHLOROPLAST DNA  SEED PLANTS  GENE  RATES  RECOMBINATION  
Comparative analysis of the medicinal plant Polygonatum kingianum (Asparagaceae) with related verticillate leaf types of the Polygonatum species based on chloroplast genomes 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1202634
作者:  Shi,Naixing;  Yang,Zefen;  Miao,Ke;  Tang,Lilei;  Zhou,Nian;  Xie,Pingxuan;  Wen,Guosong
浏览  |  Adobe PDF(10455Kb)  |  收藏  |  浏览/下载：5/1  |  提交时间：2024/05/09
Polygonatum  verticillate leaf  Polygonatum kingianum  chloroplast genome  comparative analysis  phylogenetic analysis  CODON USAGE  GENUS POLYGONATUM  SOFTWARE  TRANSFERABILITY  MITOCHONDRIAL  MARKERS  MODEL  
First comparative analysis of complete chloroplast genomes among six Hedysarum (Fabaceae) species 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1211247
作者:  Juramurodov,Inom;  Makhmudjanov,Dilmurod;  Yusupov,Ziyoviddin;  Tojibaev,Komiljon
浏览  |  Adobe PDF(5787Kb)  |  收藏  |  浏览/下载：4/0  |  提交时间：2024/05/09
Hedysarum  chloroplast genome  comparative analysis  phylogeny  protein-coding genes  MAXIMUM-LIKELIHOOD  GENE-EXPRESSION  TRNL-F  SEQUENCE  MATK  ORGANIZATION  SYSTEMATICS  PHYLOGENY  INTRON  NRDNA  
Progress, challenge and prospect of plant plastome annotation 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1166140
作者:  Qu,Xiao-Jian;  Zou,Dan;  Zhang,Rui-Yu;  Stull,Gregory W.;  Yi,Ting-Shuang
浏览  |  Adobe PDF(12821Kb)  |  收藏  |  浏览/下载：12/3  |  提交时间：2024/05/09
annotation standards  chloroplast genome  plastome  protein structure  pseudogenes  RNA-editing genes  MITOCHONDRIAL GENES  RNA  GENOME  SEQUENCE  CHLOROPLASTS  TRANSLATION  
Comparative analyses of Linderniaceae plastomes, with implications for its phylogeny and evolution 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1265641
作者:  Yan,Rongrong;  Geng,Yanfei;  Jia,Yuhuan;  Xiang,Chunlei;  Zhou,Xinxin;  Hu,Guoxiong
Adobe PDF(5462Kb)  |  收藏  |  浏览/下载：7/1  |  提交时间：2024/05/09
Lindernieae  Lindernia  Picria  Torenia  Scrophulariaceae  chloroplast genome  phylogenomics  SEQUENCE  PLACEMENT  SOFTWARE  TORENIA  DNA  DISINTEGRATION  MITOCHONDRIAL  ALIGNMENT  PLATFORM  GENOMES  
Comparative plastome genomics and phylogenetic relationships of the genus Trollius 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1293091
作者:  Li,Jiaxin;  Du,Yan;  Xie,Lei;  Jin,Xiaohua;  Zhang,Zhirong;  Yang,Meiqing
Adobe PDF(14626Kb)  |  收藏  |  浏览/下载：9/5  |  提交时间：2024/05/09
Trollius  plastome  comparative analysis  divergent hotspots  phylogenetic relationships  COMPLETE CHLOROPLAST GENOME  SEQUENCE  RANUNCULACEAE  REPEATS  PLANT  DNA  
Comparative Analyses of Chloroplast Genomes From 14 Zanthoxylum Species: Identification of Variable DNA Markers and Phylogenetic Relationships Within the Genus 期刊论文
FRONTIERS IN PLANT SCIENCE, 2021, 卷号: 11, 页码: 605793
作者:  Zhao,Kaihui;  Li,Lianqiang;  Quan,Hong;  Yang,Junbo;  Zhang,Zhirong;  Liao,Zhihua;  Lan,Xiaozhong
收藏  |  浏览/下载：61/0  |  提交时间：2022/04/02
Zanthoxylum  chloroplast genome  divergent hotspots  DNA barcode sequence  phylogeny  GENETIC DIVERSITY  SSR-MARKERS  SEQUENCE  ANNOTATION  PLATFORM  MATK  LOCI  WILD  PSBA  
Deciphering the Taxonomic Delimitation of Ottelia acuminata (Hydrocharitaceae) Using Complete Plastomes as Super-Barcodes 期刊论文
FRONTIERS IN PLANT SCIENCE, 2021, 卷号: 12, 页码: 681270
作者:  Ji,Yunheng;  Yang,Jin;  Landis,Jacob B.;  Wang,Shuying;  Yang,Zhenyan;  Zhang,Yonghong
Adobe PDF(2922Kb)  |  收藏  |  浏览/下载：137/73  |  提交时间：2022/04/02
species boundary  molecular identification  DNA barcoding  taxonomy  threatened species  aquatic plant  SPECIES DELIMITATION  DNA BARCODES  MACROPHYTE DECLINE  CONSERVATION  GENOMES  BIODIVERSITY  GENETICS  MODEL  LAKES  SPP.  
Plastome Evolution in the Hyperdiverse Genus Euphorbia (Euphorbiaceae) Using Phylogenomic and Comparative Analyses: Large-Scale Expansion and Contraction of the Inverted Repeat Region 期刊论文
FRONTIERS IN PLANT SCIENCE, 2021, 卷号: 12, 页码: 712064
作者:  Wei,Neng;  Perez-Escobar,Oscar A.;  Musili,Paul M.;  Huang,Wei-Chang;  Yang,Jun-Bo;  Hu,Ai-Qun;  Hu,Guang-Wan;  Grace,Olwen M.;  Wang,Qing-Feng
收藏  |  浏览/下载：86/0  |  提交时间：2022/04/02
comparative genomics  organellar evolution  phylogenetic inference  plastome rearrangement  spurge family  structural variations  COMPLETE CHLOROPLAST GENOME  RETICULATE EVOLUTION  MOLECULAR PHYLOGENY  SUBSTITUTION RATES  MULTIPLE ALIGNMENT  DNA-SEQUENCES  CLASSIFICATION  REVEAL  PLANT  RECOMBINATION  
Systematic Placement of the Enigmatic Southeast Asian Genus Paralamium and an Updated Phylogeny of Tribe Pogostemoneae (Lamiaceae Subfamily Lamioideae) 期刊论文
FRONTIERS IN PLANT SCIENCE, 2021, 卷号: 12, 页码: 646133
作者:  Zhao,Fei;  Wu,Yi-Wen;  Drew,Bryan T.;  Yao,Gang;  Chen,Ya-Ping;  Cai,Jie;  Liu,En-De;  Li,Bo;  Xiang,Chun-Lei
Adobe PDF(15817Kb)  |  收藏  |  浏览/下载：89/21  |  提交时间：2022/04/02
Lamioideae  molecular phylogenetics  nutlet morphology  plastome phylogenomics  Paralamium  Pogostemoneae  MOLECULAR PHYLOGENETICS  CHARACTER EVOLUTION  PERICARP STRUCTURE  PLASTID DNA  LEPECHINIA LAMIACEAE  POLLEN MORPHOLOGY  NUCLEAR  CLASSIFICATION  PHLOMOIDES  GENERA