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Ethylene and jasmonate signaling converge on gibberellin catabolism during thigmomorphogenesis in Arabidopsis 期刊论文
PLANT PHYSIOLOGY, 2024, 卷号: 194, 期号: 2, 页码: 758-773
作者:  Wang, Lei;  Ma, Canrong;  Wang, Shuanghua;  Yang, Fei;  Sun, Yan;  Tang, Jinxiang;  Luo, Ji;  Wu, Jianqiang
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GENOME-WIDE IDENTIFICATION  GENE-EXPRESSION  TRANSCRIPTION  PATHWAYS  PLANTS  TOUCH  RESPONSES  MYC2  BIOSYNTHESIS  ACTIVATION  
Differences in pseudogene evolution contributed to the contrasting flavors of turnip and Chiifu, two Brassica rapa subspecies 期刊论文
PLANT COMMUNICATIONS, 2023, 卷号: 4, 期号: 1, 页码: 100427
作者:  Yin,Xin;  Yang,Danni;  Zhao,Youjie;  Yang,Xingyu;  Zhou,Zhili;  Sun,Xudong;  Kong,Xiangxiang;  Li,Xiong;  Wang,Guangyan;  Duan,Yuanwen;  Yang,Yunqiang;  Yang,Yongping
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turnip genome  comparative genomics  pseudogene evolution  GSL biosynthesis  flavor  Brassicaceae lineage -specific polyploidization events (whole  WHOLE-GENOME TRIPLICATION  PHYLOGENETIC ANALYSIS  GLUCOSINOLATE CONTENT  ARABIDOPSIS  IDENTIFICATION  OLERACEA  EXPRESSION  SEQUENCE  ORIGIN  DIVERSIFICATION  
Comparative chloroplast genome analyses of diverse Phoebe (Lauraceae) species endemic to China provide insight into their phylogeographical origin 期刊论文
PEERJ, 2023, 卷号: 11, 页码: e14573
作者:  Shi,Wenbo;  Song,Weicai;  Chen,Zimeng;  Cai,Haohong;  Gong,Qin;  Liu,Jin;  Shi,Chao;  Wang,Shuo
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Phoebe  Chloroplast genome  Comparative analysis  Phylogeny  Phylogeographical origin  Conservation  POLYMORPHISM ANALYSIS  SEQUENCE  DNA  ANNOTATION  REGION  TOOLS  
Rapid evolution of T2/S-RNase genes in Fragaria linked to multiple transitions from self-incompatibility to self-compatibility 期刊论文
PLANT DIVERSITY, 2023, 卷号: 45, 期号: 2, 页码: 219-228
作者:  Chen,Wu;  Wan,Hong;  Liu,Fang;  Du,Haiyuan;  Zhang,Chengjun;  Fan,Weishu;  Zhu,Andan
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Fragaria  RNase T2  Self-(in)compatibility  S-RNase  S-ALLELES  RNASE  RIBONUCLEASES  GENOME  PEAR  ARABIDOPSIS  DIVERSITY  SEQUENCE  IDENTIFICATION  TRANSCRIPTOME  
Chromosome-level genome assembly of Quercus variabilis provides insights into the molecular mechanism of cork thickness 期刊论文
PLANT SCIENCE, 2023, 卷号: 337
作者:  Chang,Ermei;  Guo,Wei;  Chen,Jiahui;  Zhang,Jin;  Jia,Zirui;  Tschaplinski,Timothy J.;  Yang,Xiaohan;  Jiang,Zeping;  Liu,Jianfeng
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Quercus variabilis  Chromosome-level genome  Cork thickness  Suberin biosynthesis  SUBERIN BIOSYNTHESIS  GENE  PROGRAM  TRANSCRIPTOME  ACCURATE  ENCODES  TOOL  WAX  
An updated classification for the hyper-diverse genus Corydalis (Papaveraceae: Fumarioideae) based on phylogenomic and morphological evidence 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2023
作者:  Chen,Jun-Tong;  Liden,Magnus;  Huang,Xian-Han;  Zhang,Liang;  Zhang,Xin-Jian;  Kuang,Tian-Hui;  Landis,Jacob B.;  Wang,Dong;  Deng,Tao;  Sun,Hang
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character evolution  Corydalis  genome skimming  Papaveraceae  phylogeny  FUMARIACEAE  EVOLUTIONARY  HIMALAYA  HUBEI  
Marsdenia tenacissima genome reveals calcium adaptation and tenacissoside biosynthesis 期刊论文
PLANT JOURNAL, 2023, 卷号: 113, 期号: 6, 页码: 1146-1159
作者:  Zhou,Yanli;  Fan,Wei;  Zhang,Haoyue;  Zhang,Jingling;  Zhang,Guanghui;  Wang,Ding;  Xiang,Guisheng;  Zhao,Changhong;  Li,Lianhua;  He,Simei;  Lu,Yingchun;  Zhao,Jiuxia;  Meng,Zhengui;  Zhang,Xianmin;  Meng,Hengling;  Yin,Xinhua;  Yang,Shengchao;  Long,Guangqiang
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genome assembly  Hi-C  Apocynaceae  Ca2+ adaptation  cell-wall remodeling  Marsdenia tenacissima  CELL  GENES  TRANSCRIPTOME  MECHANISMS  ALIGNMENT  SOIL  
Phylogenomic insights into the origin and evolutionary history of evergreen broadleaved forests in East Asia under Cenozoic climate change 期刊论文
MOLECULAR ECOLOGY, 2023, 卷号: 32, 期号: 11, 页码: 2850-2868
作者:  Qin,Sheng-Yuan;  Zuo,Zheng-Yu;  Guo,Cen;  Du,Xin-Yu;  Liu,Shui-Yin;  Yu,Xiang-Qin;  Xiang,Xiao-Guo;  Rong,Jun;  Liu,Bing;  Liu,Zhi-Fang;  Ma,Peng-Fei;  Li,De-Zhu
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East Asian monsoon  evergreen broadleaved forests  genome resequencing  Lauraceae  Litsea complex  single-nucleotide variants  SOUTHERN CHINA EVIDENCE  NORTHERN-HEMISPHERE  MOLECULAR PHYLOGENY  SPECIES RICHNESS  LITSEA COMPLEX  R PACKAGE  LAURACEAE  EOCENE  TERTIARY  BIOGEOGRAPHY  
Bacillus subtilis YZ-1 surfactins are involved in effective toxicity against agricultural pests 期刊论文
PEST MANAGEMENT SCIENCE, 2023
作者:  Xia,Mengyuan;  Munir,Shahzad;  Li,Yongmei;  Ahmed,Ayesha;  He,Pengbo;  Wu,Yixin;  Li,Xingyu;  Tang,Ping;  Wang,Zaiqiang;  He,Pengfei;  Wang,Yuehu;  He,Yueqiu
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Bacillus  Tenebrio molitor  agricultural pests  surfactins  bioinsecticide  CYCLIC LIPOPEPTIDES  SPB1 BIOSURFACTANT  GENOME  LEPIDOPTERA  IDENTIFICATION  SPORULATION  METABOLITES  SEQUENCE  MIDGUT  
Home at last: Molecular phylogenetic analyses support subsuming Metastachydium within Phlomoides (Lamiaceae) 期刊论文
TAXON, 2023
作者:  Zhao,Yue;  Zhao,Fei;  Salmaki,Yasaman;  Paton,Alan;  Cai,Jie;  Drew,Bryan T.;  Mahmoudi,Chonour;  Efimov,Petr;  Turginov,Orzimat T.;  Liang,Cun-Zhu;  Chen,Ya-Ping;  Xiang,Chun-Lei
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Central Asia  Lamioideae  nrITS  Phlomideae  Phlomis  plastome phylogenomics  COMPLETE CHLOROPLAST GENOME  PLASTID DNA  LEPECHINIA LAMIACEAE  LAMIOIDEAE LAMIACEAE  CHARACTER EVOLUTION  NUCLEAR  CLASSIFICATION  POSITION  ORIGIN  GENERA