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Five long-distance dispersals shaped the major intercontinental disjunctions in Tectariaceae s.l. (Polypodiales, Polypodiopsida) 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2023, 卷号: 186, 页码: 107845
作者:  Wan,Xia;  Zhang,Liang;  Lehtonen,Samuli;  Tuomisto,Hanna;  Zhang,Da-Wei;  Gao,Xin-Fen;  Zhang,Li-Bing
浏览  |  Adobe PDF(15107Kb)  |  收藏  |  浏览/下载：125/22  |  提交时间：2024/07/25
Arthropteris  Boreotropical migration  Diversification  Leaf dissection  Pteridryaceae  Species radiation  FOUNDER-EVENT SPECIATION  PLANT SIZE  HISTORICAL BIOGEOGRAPHY  PHYLOGENETIC PLACEMENT  MODEL SELECTION  EPIPHYTIC FERN  NORTHERN-HEMISPHERE  MAXIMUM-LIKELIHOOD  NUCLEAR MARKERS  TOOTHED LEAVES  
Characterizing conflict and congruence of molecular evolution across organellar genome sequences for phylogenetics in land plants 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1125107
作者:  Tyszka,Alexa S.;  Bretz,Eric C.;  Robertson,Holly M.;  Woodcock-Girard,Miles D.;  Ramanauskas,Karolis;  Larson,Drew A.;  Stull,Gregory W.;  Walker,Joseph F.
浏览  |  Adobe PDF(854Kb)  |  收藏  |  浏览/下载：133/24  |  提交时间：2024/05/09
phylogenetics  plastome  mitochondrial genome  chloroplast genome  phylogenomics  combinability  phylogenetic conflict  MITOCHONDRIAL GENOMES  PENALIZED LIKELIHOOD  NUCLEOTIDE-SEQUENCES  EXTANT GYMNOSPERMS  DYNAMIC EVOLUTION  CHLOROPLAST DNA  SEED PLANTS  GENE  RATES  RECOMBINATION  
First comparative analysis of complete chloroplast genomes among six Hedysarum (Fabaceae) species 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1211247
作者:  Juramurodov,Inom;  Makhmudjanov,Dilmurod;  Yusupov,Ziyoviddin;  Tojibaev,Komiljon
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Hedysarum  chloroplast genome  comparative analysis  phylogeny  protein-coding genes  MAXIMUM-LIKELIHOOD  GENE-EXPRESSION  TRNL-F  SEQUENCE  MATK  ORGANIZATION  SYSTEMATICS  PHYLOGENY  INTRON  NRDNA  
A global phylogeny of Lycopodiaceae (Lycopodiales; lycophytes) with the description of a new genus, Brownseya, from Oceania 期刊论文
TAXON, 2022, 卷号: 71, 期号: 1, 页码: 25-51
作者:  Chen,De-Kui;  Zhou,Xin-Mao;  Rothfels,Carl J.;  Shepherd,Lara D.;  Knapp,Ralf;  Zhang,Liang;  Lu,Ngan Thi;  Fan,Xue-Ping;  Wan,Xia;  Gao,Xin-Fen;  He,Hai;  Zhang,Li-Bing
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Huperzia  Lycophyte Phylogeny  Lycopodiella Serpentina  Phlegmariurus  Phylloglossum  Vascular Plant Evolution  Complete Chloroplast Genome  Lycopodiopsida Lycopodiaceae  Generic Classification  Spore Morphology  Early Evolution  Land Plants  Rbcl Gene  Huperzia  Sequence  Likelihood  
Phylogeny, biogeography, and character evolution in the fern family Hypodematiaceae 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2022, 卷号: 166, 页码: 107340
作者:  Fan,Xue-Ping;  Ngan Thi Lu;  Li,Chun-Xiang;  Knapp,Ralf;  He,Hai;  Zhou,Xin-Mao;  Wan,Xia;  Zhang,Liang;  Gao,Xin-Fen;  Zhang,Li-Bing
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Cryptic species  Fern phylogeny  Hair patterns  Hypodematium  Leucostegia  Old World  ANTARCTIC PENINSULA  MAXIMUM-LIKELIHOOD  CLASSIFICATION  SEQUENCE  INFERENCE  HISTORY  PALEOCLIMATE  DAVALLIACEAE  LYCOPHYTES  JMODELTEST  
Nuclear phylotranscriptomics and phylogenomics support numerous polyploidization events and hypotheses for the evolution of rhizobial nitrogen-fixing symbiosis in Fabaceae 期刊论文
MOLECULAR PLANT, 2021, 卷号: 14, 期号: 5, 页码: 748-773
作者:  Zhao,Yiyong;  Zhang,Rong;  Jiang,Kai-Wen;  Qi,Ji;  Hu,Yi;  Guo,Jing;  Zhu,Renbin;  Zhang,Taikui;  Egan,Ashley N.;  Yi,Ting-Shuang;  Huang,Chien-Hsun;  Ma,Hong
收藏  |  浏览/下载：219/0  |  提交时间：2022/04/02
Fabaceae  Leguminosae  nuclear phylogeny  divergence times  whole-genome duplication  rhizobial nodulation  COMPARATIVE GENOMICS  PHYLOGENETIC PERSPECTIVES  EARLY DIVERSIFICATION  PENALIZED LIKELIHOOD  ANCESTRAL POLYPLOIDY  MOLECULAR EVOLUTION  LOTUS-JAPONICUS  ANALYSES REVEAL  GENE  LEGUMINOSAE  
Hidden in plain view: an example from Ptilidium (Ptilidiaceae, Marchantiophyta) 期刊论文
PHYTOTAXA, 2021, 卷号: 510, 期号: 1, 页码: 29-42
作者:  Bakalin,Vadim;  Vilnet,Anna;  Klimova,Ksenia;  Ma,Wen Zhang;  Choi,Seung Se;  Hentschel,Jorn
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Ptilidium  cryptic speciation  evolution  Sino-Himalaya  taxonomy  MAXIMUM-LIKELIHOOD  UNIVERSAL PRIMERS  LEAFY LIVERWORT  AMPLIFICATION  SCAPANIACEAE  SPECIATION  TAXA  
A new species of Chaetothyrina on branches of mango, and introducing Phaeothecoidiellaceae fam. nov. 期刊论文
MYCOSPHERE, 2017, 卷号: 8, 期号: 1, 页码: 137-146
作者:  Hongsanan,S.;  Zhao,R. L.;  Hyde,K. D.
浏览  |  Adobe PDF(1231Kb)  |  收藏  |  浏览/下载：497/82  |  提交时间：2017/10/23
Sooty Blotch  Flyspeck Complex  Maximum-likelihood  Gene-sequences  Fungi  Apple  China  Morphology  Diversity  Bootstrap  Capnodiales  Dothideomycetes  Flyspeck  Phylogeny  Sooty Blotch  
Should genes with missing data be excluded from phylogenetic analyses? 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2014, 卷号: 80, 期号: 18B, 页码: 308-318
作者:  Jiang, Wei;  Chen, Si-Yun;  Wang, Hong;  Li, De-Zhu;  Wiens, John J.;  Li,DZ (reprint author),Chinese Acad Sci,Kunming Inst Bot,Key Lab Plant Divers & Biogeog East Asia,Kunming 650201,Yunnan,Peoples R China.;  jiangwei@mail.kib.ac.cn;  chensiyun@mail.kib.ac.cn;  wanghong@mail.kib.ac.cn;  dzl@mail.kib.ac.cn;  wiensj@email.arizona.edu
浏览  |  Adobe PDF(1085Kb)  |  收藏  |  浏览/下载：400/90  |  提交时间：2015/01/20
Accuracy  Maximum Likelihood  Missing Data  Phylogeny  
Notes on Early Land Plants Today. 62. A synopsis of Myriocoleopsis (Lejeuneaceae, Marchantiophyta) with special reference to transfer of Cololejeunea minutissima to Myriocoleopsis 期刊论文
PHYTOTAXA, 2014, 卷号: 183, 期号: 4, 页码: 293-297
作者:  Yu, Ying;  Pocs, Tamas;  Zhu, Rui-Liang;  Zhu,RL (reprint author),E China Normal Univ,Sch Life Sci,Dept Biol,500 Dongchuan Rd,Shanghai 200241,Peoples R China.;  rlzhu@bio.ecnu.edu.cn
浏览  |  Adobe PDF(194Kb)  |  收藏  |  浏览/下载：290/87  |  提交时间：2015/01/20
Maximum-likelihood  Phoma  Probability  Phylogeny  Inference  Genera  Trees  Tools  Asexual States  Coelomycetes  Molecular Phylogeny  Morphology