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Differences in pseudogene evolution contributed to the contrasting flavors of turnip and Chiifu, two Brassica rapa subspecies 期刊论文
PLANT COMMUNICATIONS, 2023, 卷号: 4, 期号: 1, 页码: 100427
作者:  Yin,Xin;  Yang,Danni;  Zhao,Youjie;  Yang,Xingyu;  Zhou,Zhili;  Sun,Xudong;  Kong,Xiangxiang;  Li,Xiong;  Wang,Guangyan;  Duan,Yuanwen;  Yang,Yunqiang;  Yang,Yongping
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turnip genome  comparative genomics  pseudogene evolution  GSL biosynthesis  flavor  Brassicaceae lineage -specific polyploidization events (whole  WHOLE-GENOME TRIPLICATION  PHYLOGENETIC ANALYSIS  GLUCOSINOLATE CONTENT  ARABIDOPSIS  IDENTIFICATION  OLERACEA  EXPRESSION  SEQUENCE  ORIGIN  DIVERSIFICATION  
Comparative chloroplast genome analyses of diverse Phoebe (Lauraceae) species endemic to China provide insight into their phylogeographical origin 期刊论文
PEERJ, 2023, 卷号: 11, 页码: e14573
作者:  Shi,Wenbo;  Song,Weicai;  Chen,Zimeng;  Cai,Haohong;  Gong,Qin;  Liu,Jin;  Shi,Chao;  Wang,Shuo
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Phoebe  Chloroplast genome  Comparative analysis  Phylogeny  Phylogeographical origin  Conservation  POLYMORPHISM ANALYSIS  SEQUENCE  DNA  ANNOTATION  REGION  TOOLS  
Comparative chloroplast genome analysis of Citrus (Rutaceae) species: Insights into genomic characterization, phylogenetic relationships, and discrimination of subgenera 期刊论文
SCIENTIA HORTICULTURAE, 2023, 卷号: 313, 页码: 111909
作者:  Shi,Wenbo;  Song,Weicai;  Liu,Jin;  Shi,Chao;  Wang,Shuo
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Citrus  Plastid genomics  Genomic structure  Sequence variation  Molecular markers  Phylogeny  Taxonomy  HORT. EX TANAKA  GENETIC DIVERSITY  MOLECULAR PHYLOGENY  SPACER REGION  JEJU ISLAND  SEQUENCE  DNA  ORIGIN  TAXONOMY  AURANTIOIDEAE  
High species richness in the lichen genus Peltigera (Ascomycota, Lecanoromycetes): 34 species in the dolichorhizoid and scabrosoid clades of section Polydactylon, including 24 new to science 期刊论文
PERSOONIA, 2023, 卷号: 51, 页码: 1-88
作者:  Magain,N.;  Miadlikowska,J.;  Goffinet,B.;  Goward,T.;  Pardo-De la Hoz,C. J.;  Juriado,I.;  Simon,A.;  Mercado-Diaz,J. A.;  Barlow,T.;  Moncada,B.;  Luecking,R.;  Spielmann,A.;  Canez,L.;  Wang,L. S.;  Nelson,P.;  Wheeler,T.;  Lutzoni,F.;  Serusiaux,E.
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cryptic species  identification key  new taxa  Peltigerales species delimitation  INTERNAL TRANSCRIBED SPACER  BRITISH-COLUMBIA  PHYLOGENETIC REVISION  FORMING ASCOMYCOTA  NITROGEN-FIXATION  LARGE SUBUNIT  RECENT ORIGIN  DELIMITATION  FUNGI  DIVERSITY  
Home at last: Molecular phylogenetic analyses support subsuming Metastachydium within Phlomoides (Lamiaceae) 期刊论文
TAXON, 2023
作者:  Zhao,Yue;  Zhao,Fei;  Salmaki,Yasaman;  Paton,Alan;  Cai,Jie;  Drew,Bryan T.;  Mahmoudi,Chonour;  Efimov,Petr;  Turginov,Orzimat T.;  Liang,Cun-Zhu;  Chen,Ya-Ping;  Xiang,Chun-Lei
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Central Asia  Lamioideae  nrITS  Phlomideae  Phlomis  plastome phylogenomics  COMPLETE CHLOROPLAST GENOME  PLASTID DNA  LEPECHINIA LAMIACEAE  LAMIOIDEAE LAMIACEAE  CHARACTER EVOLUTION  NUCLEAR  CLASSIFICATION  POSITION  ORIGIN  GENERA  
Pangenome analysis provides insight into the evolution of the orange subfamily and a key gene for citric acid accumulation in citrus fruits 期刊论文
NATURE GENETICS, 2023
作者:  Huang,Yue;  He,Jiaxian;  Xu,Yuantao;  Zheng,Weikang;  Wang,Shaohua;  Chen,Peng;  Zeng,Bin;  Yang,Shuizhi;  Jiang,Xiaolin;  Liu,Zishuang;  Wang,Lun;  Wang,Xia;  Liu,Shengjun;  Lu,Zhihao;  Liu,Ziang;  Yu,Huiwen;  Yue,Jianqiang;  Gao,Junyan;  Zhou,Xianyan;  Long,Chunrui;  Zeng,Xiuli;  Guo,Yong-Jie;  Zhang,Wen-Fu;  Xie,Zongzhou;  Li,Chunlong;  Ma,Zhaocheng;  Jiao,Wenbiao;  Zhang,Fei;  Larkin,Robert M.;  Krueger,Robert R.;  Smith,Malcolm W.;  Ming,Ray;  Deng,Xiuxin;  Xu,Qiang
浏览  |  Adobe PDF(12192Kb)  |  收藏  |  浏览/下载：75/24  |  提交时间：2024/07/22
PHYLOGENETIC ANALYSIS  VACUOLAR PH  GENOME  RUTACEAE  ACCURATE  ORIGIN  TOOL  CLASSIFICATION  PROGRAM  RETROTRANSPOSONS  
Haplotype-resolved genomes of wild octoploid progenitors illuminate genomic diversifications from wild relatives to cultivated strawberry 期刊论文
NATURE PLANTS, 2023, 卷号: 9, 期号: 8, 页码: 1252-+
作者:  Jin,Xin;  Du,Haiyuan;  Zhu,Chumeng;  Wan,Hong;  Liu,Fang;  Ruan,Jiwei;  Mower,Jeffrey P.;  Zhu,Andan
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FRAGARIA  ACCURATE  RECONSTRUCTION  EVOLUTIONARY  ALIGNMENT  ORIGIN  POPULATIONS  ASSEMBLIES  ANNOTATION  GENERATION  
Multi-omics analysis reveals the evolutionary origin of diterpenoid alkaloid biosynthesis pathways in Aconitum 期刊论文
JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2023, 卷号: 65, 期号: 10, 页码: 2320-2335
作者:  Zhao,Dake;  Zhang,Ya;  Ren,Huanxing;  Shi,Yana;  Dong,Ding;  Li,Zonghang;  Cui,Guanghong;  Shen,Yong;  Mou,Zongmin;  Kennelly,Edward J.;  Huang,Luqi;  Ruan,Jue;  Chen,Suiyun;  Yu,Diqiu;  Cun,Yupeng
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Aconitum vilmorinianum  acute toxicity  biosynthetic pathway  diterpenoid alkaloid  evolutionary origin  genome assembly  PHYLOGENETIC ANALYSIS  SUPPLEMENT TREMBL  CANDIDATE GENES  R PACKAGE  TOOL  TRANSCRIPTOME  IDENTIFICATION  RANUNCULACEAE  PREDICTION  DIVERSITY  
Phylogenomics and morphological evolution of the mega-diverse genus Artemisia (Asteraceae: Anthemideae): implications for its circumscription and infrageneric taxonomy 期刊论文
ANNALS OF BOTANY, 2023, 卷号: 131, 期号: 5, 页码: 867-883
作者:  Jiao,Bohan;  Chen,Chen;  Wei,Meng;  Niu,Guohao;  Zheng,Jiye;  Zhang,Guojin;  Shen,Jiahao;  Vitales,Daniel;  Valles,Joan;  Verloove,Filip;  Erst,Andrey S.;  Soejima,Akiko;  Mehregan,Iraj;  Kokubugata,Goro;  Chung,Gyu-Young;  Ge,Xuejun;  Gao,Lianming;  Yuan,Yuan;  Joly,Cyprien;  Jabbour,Florian;  Wang,Wei;  Shultz,Leila M.;  Gao,Tiangang
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Artemisia  phylogenomics  taxonomy  morphological evolution  generic delimitation  infrageneric taxonomy  genome skimming  NUCLEAR RIBOSOMAL DNA  MOLECULAR PHYLOGENY  SUBGENUS TRIDENTATAE  ALLIES ANTHEMIDEAE  ENDEMIC ARTEMISIA  TREE  L.  CLASSIFICATION  GENERA  ORIGIN  
Ixeridium sagittarioides (Asteraceae-Cichorieae) revisited: range extension and molecular evidence for its systematic position in the Lactuca alliance 期刊论文
PHYTOKEYS, 2023, 期号: 230, 页码: 115-130
作者:  Zhang,Jian-Wen;  Kilian,Norbert;  Huang,Jiang-Hua;  Sun,Hang
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Asteraceae  Cichorieae  Crepidinae  Lactucinae  Lactuca sagittarioides  reticulate evolution  systematic position  taxonomy  COMPOSITAE  ORIGIN  CHOICE  GENUS