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Phylogenomics and morphological evolution of the mega-diverse genus Artemisia (Asteraceae: Anthemideae): implications for its circumscription and infrageneric taxonomy 期刊论文
ANNALS OF BOTANY, 2023, 卷号: 131, 期号: 5, 页码: 867-883
作者:  Jiao,Bohan;  Chen,Chen;  Wei,Meng;  Niu,Guohao;  Zheng,Jiye;  Zhang,Guojin;  Shen,Jiahao;  Vitales,Daniel;  Valles,Joan;  Verloove,Filip;  Erst,Andrey S.;  Soejima,Akiko;  Mehregan,Iraj;  Kokubugata,Goro;  Chung,Gyu-Young;  Ge,Xuejun;  Gao,Lianming;  Yuan,Yuan;  Joly,Cyprien;  Jabbour,Florian;  Wang,Wei;  Shultz,Leila M.;  Gao,Tiangang
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Artemisia  phylogenomics  taxonomy  morphological evolution  generic delimitation  infrageneric taxonomy  genome skimming  NUCLEAR RIBOSOMAL DNA  MOLECULAR PHYLOGENY  SUBGENUS TRIDENTATAE  ALLIES ANTHEMIDEAE  ENDEMIC ARTEMISIA  TREE  L.  CLASSIFICATION  GENERA  ORIGIN  
桔梗亚科的分子系统发育和生物地理学研究 -兼论细胞器基因组编码区的替代速率模式与机制 学位论文
: 中国科学院大学, 2022
作者:  李春姣
Adobe PDF(2839Kb)  |  收藏  |  浏览/下载：57/0  |  提交时间：2024/05/14
桔梗亚科，浅层测序技术，系统发育基因组学，核糖体 DNA，细胞 器基因组，生物地理学，编码区，替代速率，突变速率  Campanuloideae, genome skimming, phylogenomics, nuclear ribosomal DNA, organelle genome, biogeography, coding region, substitution rate, mutation rate  
Complex and reticulate origin of edible roses (Rosa, Rosaceae) in China 期刊论文
HORTICULTURE RESEARCH, 2022, 卷号: 9, 页码: uhab051
作者:  Cui, Wei-Hua;  Du, Xin-Yu;  Zhong, Mi-Cai;  Fang, Wei;  Suo, Zhi-Quan;  Wang, Dan;  Dong, Xue;  Jiang, Xiao-Dong;  Hu, Jin-Yong
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NUCLEAR-DNA CONTENT  COMPLETE CHLOROPLAST GENOME  DENSITY GENETIC-MAP  GENUS ROSA  PHYLOGENETIC-RELATIONSHIPS  MOLECULAR EVIDENCE  RIBOSOMAL DNA  GARDEN ROSES  WILD ROSES  EVOLUTION  
Phaeorrhiza (Physciaceae), a new lichen genus record to China 期刊论文
PHYTOTAXA, 2021, 卷号: 510, 期号: 3, 页码: 228-238
作者:  ZHONG,Q. I. U. Y. I.;  ZHANG,Y. A. N. Y. U. N.;  WANG,X. I. N. Y. U.;  TIMDAL,E. I. N. A. R.;  GONG,H. E. D. E.;  WANG,Z. I. Z. H. I.;  WANG,L. I. S. O. N. G.
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lichenized fungi  Tibetan Plateau  taxonomy  phylogeny  alpine biota  SUBUNIT RIBOSOMAL DNA  PHYLOGENY  SEQUENCE  ASCOMYCOTINA  LECANORALES  PRIMERS  NUCLEAR  FUNGI  
Delimiting species in Basidiomycota: a review 期刊论文
FUNGAL DIVERSITY, 2021, 卷号: 109, 期号: 1, 页码: 181-237
作者:  Cao,Bin;  Haelewaters,Danny;  Schoutteten,Nathan;  Begerow,Dominik;  Boekhout,Teun;  Giachini,Admir J.;  Gorjon,Sergio P.;  Gunde-Cimerman,Nina;  Hyde,Kevin D.;  Kemler,Martin;  Li,Guo-Jie;  Liu,Dong-Mei;  Liu,Xin-Zhan;  Nuytinck,Jorinde;  Papp,Viktor;  Savchenko,Anton;  Savchenko,Kyryll;  Tedersoo,Leho;  Theelen,Bart;  Thines,Marco;  Tomsovsky,Michal;  Toome-Heller,Merje;  Uron,Judith P.;  Verbeken,Annemieke;  Vizzini,Alfredo;  Yurkov,Andrey M.;  Zamora,Juan Carlos;  Zhao,Rui-Lin
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Biological species concept  Morphological species concept  Phylogenetic species concept  Taxonomy  INTERNAL TRANSCRIBED SPACER  FRAGMENT-LENGTH-POLYMORPHISMS  FLIGHT MASS-SPECTROMETRY  RUST FUNGI PUCCINIALES  NUCLEAR RIBOSOMAL DNA  MOLECULAR PHYLOGENETIC-RELATIONSHIPS  HEBELOMA-CRUSTULINIFORME COMPLEX  ASSESSING NATURAL RELATIONSHIPS  DESORPTION IONIZATION-TIME  MULTIPLE GENE GENEALOGIES  
Fungal diversity notes 1387-1511: taxonomic and phylogenetic contributions on genera and species of fungal taxa 期刊论文
FUNGAL DIVERSITY, 2021, 卷号: 111, 期号: 1, 页码: 1-335
作者:  Boonmee,Saranyaphat;  Wanasinghe,Dhanushka N.;  Calabon,Mark S.;  Huanraluek,Naruemon;  Chandrasiri,Sajini K. U.;  Jones,Gareth E. B.;  Rossi,Walter;  Leonardi,Marco;  Singh,Sanjay K.;  Rana,Shiwali;  Singh,Paras N.;  Maurya,Deepak K.;  Lagashetti,Ajay C.;  Choudhary,Deepika;  Dai,Yu-Cheng;  Zhao,Chang-Lin;  Mu,Yan-Hong;  Yuan,Hai-Sheng;  He,Shuang-Hui;  Phookamsak,Rungtiwa;  Jiang,Hong-Bo;  Martin,Maria P.;  Duenas,Margarita;  Teresa Telleria,M.;  Kalucka,Izabela L.;  Jagodzinski,Andrzej M.;  Liimatainen,Kare;  Pereira,Diana S.;  Phillips,Alan J. L.;  Suwannarach,Nakarin;  Kumla,Jaturong;  Khuna,Surapong;  Lumyong,Saisamorn;  Potter,Tarynn B.;  Shivas,Roger G.;  Sparks,Adam H.;  Vaghefi,Niloofar;  Abdel-Wahab,Mohamed A.;  Abdel-Aziz,Faten A.;  Li,Guo-Jie;  Lin,Wen-Fei;  Singh,Upendra;  Bhatt,Rajendra P.;  Lee,Hyang Burm;  Nguyen,Thuong T. T.;  Kirk,Paul M.;  Dutta,Arun Kumar;  Acharya,Krishnendu;  Sarma,V. Venkateswara;  Niranjan,M.;  Rajeshkumar,Kunhiraman C.;  Ashtekar,Nikhil;  Lad,Sneha;  Wijayawardene,Nalin N.;  Bhat,Darbe J.;  Xu,Rong-Ju;  Wijesinghe,Subodini N.;  Shen,Hong-Wei;  Luo,Zong-Long;  Zhang,Jing-Yi;  Sysouphanthong,Phongeun;  Thongklang,Naritsada;  Bao,Dan-Feng;  Aluthmuhandiram,Janith V. S.;  Abdollahzadeh,Jafar;  Javadi,Alireza;  Dovana,Francesco;  Usman,Muhammad;  Khalid,Abdul Nasir;  Dissanayake,Asha J.;  Telagathoti,Anusha;  Probst,Maraike;  Peintner,Ursula;  Garrido-Benavent,Isaac;  Bona,Lilla;  Merenyi,Zsolt;  Boros,Lajos;  Zoltan,Bratek;  Stielow,J. Benjamin;  Jiang,Ning;  Tian,Cheng-Ming;  Shams,Esmaeil;  Dehghanizadeh,Farzaneh;  Pordel,Adel;  Javan-Nikkhah,Mohammad;  Denchev,Teodor T.;  Denchev,Cvetomir M.;  Kemler,Martin;  Begerow,Dominik;  Deng,Chun-Ying;  Harrower,Emma;  Bozorov,Tohir;  Kholmuradova,Tutigul;  Gafforov,Yusufjon;  Abdurazakov,Aziz;  Xu,Jian-Chu;  Mortimer,Peter E.;  Ren,Guang-Cong;  Jeewon,Rajesh;  Maharachchikumbura,Sajeewa S. N.;  Phukhamsakda,Chayanard;  Mapook,Ausana;  Hyde,Kevin D.
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72 New Taxa  One New Combination  One Reference Specimen  51 New Records  Agaricomycetes  Ascomycota  Bartheletiomycetes  Basidiomycota  Dothideomycetes  Eurotiomycetes  Exobasidiomycetes  Laboulbeniomycetes  Leotiomycetes  Mortierellomycetes  Mortierellomycota  Mucoromycetes  Mucoromycota  Phylogeny  Sordariomycetes  Taxonomy  Fresh-water Fungi  Nuclear Ribosomal Dna  Red-sea Mangroves  Birds Nest Fungi  Sp-nov  Sp.-nov.  Molecular Phylogeny  Natural Classification  Eutypa-lata  Phanerochaete Polyporales  
Frequent gene flow blurred taxonomic boundaries of sections in Lilium L. (Liliaceae) 期刊论文
PLOS ONE, 2017, 卷号: 12, 期号: 8, 页码: e0183209
作者:  Gong, Xun;  Hung, Kuo-Hsiang;  Ting, Yu-Wei;  Hsu, Tsai-Wen;  Malikova, Lenka;  Huyen Trang Tran;  Huang, Chao-Li;  Liu, Shih-Hui;  Chiang, Tzen-Yuh
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Nuclear Ribosomal Dna  Transcribed Spacer Region  Molecular Phylogeny  European Lilies  Sequence Data  Plant Dna  Evolutionary  Chloroplast  Genome  Incongruence  
Evolution of Rosaceae Fruit Types Based on Nuclear Phylogeny in the Context of Geological Times and Genome Duplication 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2017, 卷号: 34, 期号: 2, 页码: 262-281
作者:  Xiang,Yezi;  Huang,Chien-Hsun;  Hu,Yi;  Wen,Jun;  Li,Shisheng;  Yi,Tingshuang;  Chen,Hongyi;  Xiang,Jun;  Ma,Hong
浏览  |  Adobe PDF(5900Kb)  |  收藏  |  浏览/下载：302/58  |  提交时间：2017/10/23
Northeastern Washington-state  Sequence Data  Molecular Phylogenetics  British-columbia  Divergence Times  Prunus Rosaceae  Ribosomal Dna  Early Eocene  Gene Data  Polyploidy  Coalescence  Fruit Evolution  Molecular Clock  Nuclear Phylogeny  Rosaceae  Genome Duplication  
Fifteen novel universal primer pairs for sequencing whole chloroplast genomes and a primer pair for nuclear ribosomal DNAs 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2016, 卷号: 54, 期号: 3, 页码: 219-227
作者:  Zhang, Ting;  Zeng, Chun-Xia;  Yang, Jun-Bo;  Li, Hong-Tao;  Li, De-Zhu
浏览  |  Adobe PDF(1664Kb)  |  收藏  |  浏览/下载：369/132  |  提交时间：2017/01/05
Angiosperm Chloroplast Genomes  Next-generation Sequencing  Nuclear Ribosomal Dna  Universal Primer Pairs  
Comparative analysis of a large dataset indicates that internal transcribed spacer (ITS) should be incorporated into the core barcode for seed plants 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2011, 卷号: 108, 期号: 49, 页码: 19641-19646
Li, De-Zhu; Gao, Lian-Ming; Li, Hong-Tao; Wang, Hong; Ge, Xue-Jun; Liu, Jian-Quan; Chen, Zhi-Duan; Zhou, Shi-Liang; Chen, Shi-Lin; Yang, Jun-Bo; Fu, Cheng-Xin; Zeng, Chun-Xia; Yan, Hai-Fei; Zhu, Ying-Jie; Sun, Yong-Shuai; Chen, Si-Yun; Zhao, Lei; Wang, Kun; Yang, Tuo; Duan, Guang-Wen
Adobe PDF(601Kb)  |  收藏  |  浏览/下载：1190/175  |  提交时间：2012/03/16
Land Plants  Species Identification  Nuclear Ribosomal (Nr) Dna  Dna Barcodes  Land Plants  Species Identification  Flowering Plants  Conservation  Speciation  Its2  Evolutionary  Phylogeny  Accuracy