The chloroplast genome of a rare and an endangered species Salweenia bouffordiana (Leguminosae) in China
Wariss, Hafiz Muhammad1,2,3; Yi, Ting-Shuang2; Wang, Hong1; Zhang, Rong2,3
2018-09-01
Source PublicationCONSERVATION GENETICS RESOURCES
ISSN1877-7252
Volume10Issue:3Pages:405-407
Abstract

Salweenia bouffordiana is an endangered species of Qinghai-Tibetan Plateau (QTP) in China. In this study, its complete plastome was assembled using next-generation sequencing. The complete genome is 153, 730 bp in length, comprises a pair of inverted repeat (IR; 26, 227 bp) regions separated by the large single-copy (LSC; 83, 509 bp) and small single-copy (SSC; 17, 767 bp) regions. It encodes 111 genes, including 77 protein-coding genes (PCGs), 30 tRNAs and 4 rRNAs. The nucleotide composition is asymmetric (31.6% A, 18.1% C, 18.7% G and 31.6% T) with an overall A+T content of 73.2%. Three types of 111 simple sequence repeats (SSRs) were detected in the plastome, including 107 mono- and 4 di-nucleotide repeats. The newly sequenced complete plastome and identified SSRs will help in understanding the plastome evolution and genetic conservation of S. bouffordiana.

KeywordSalweenia Bouffordiana Endangered Species Plastome Ssr Leguminosae
DOI10.1007/s12686-017-0836-8
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Cited Times:1[WOS]   [WOS Record]     [Related Records in WOS]
Document Type期刊论文
Identifierhttp://ir.kib.ac.cn/handle/151853/61686
Collection中国科学院东亚植物多样性与生物地理学重点实验室
Affiliation1.Chinese Acad Sci, Kunming Inst Bot, Key Lab Plant Divers & Biogeog East Asia, Kunming, Yunnan, Peoples R China
2.Chinese Acad Sci, Germplasm Bank Wild Species, Kunming Inst Bot, Kunming, Yunnan, Peoples R China
3.Univ Chinese Acad Sci, Beijing, Peoples R China
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GB/T 7714
Wariss, Hafiz Muhammad,Yi, Ting-Shuang,Wang, Hong,et al. The chloroplast genome of a rare and an endangered species Salweenia bouffordiana (Leguminosae) in China[J]. CONSERVATION GENETICS RESOURCES,2018,10(3):405-407.
APA Wariss, Hafiz Muhammad,Yi, Ting-Shuang,Wang, Hong,&Zhang, Rong.(2018).The chloroplast genome of a rare and an endangered species Salweenia bouffordiana (Leguminosae) in China.CONSERVATION GENETICS RESOURCES,10(3),405-407.
MLA Wariss, Hafiz Muhammad,et al."The chloroplast genome of a rare and an endangered species Salweenia bouffordiana (Leguminosae) in China".CONSERVATION GENETICS RESOURCES 10.3(2018):405-407.
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