The chloroplast genome of a rare and an endangered species Salweenia bouffordiana (Leguminosae) in China
Wariss, Hafiz Muhammad1,2,3; Yi, Ting-Shuang2; Wang, Hong1; Zhang, Rong2,3
2018-09-01
发表期刊CONSERVATION GENETICS RESOURCES
ISSN1877-7252
卷号10期号:3页码:405-407
摘要

Salweenia bouffordiana is an endangered species of Qinghai-Tibetan Plateau (QTP) in China. In this study, its complete plastome was assembled using next-generation sequencing. The complete genome is 153, 730 bp in length, comprises a pair of inverted repeat (IR; 26, 227 bp) regions separated by the large single-copy (LSC; 83, 509 bp) and small single-copy (SSC; 17, 767 bp) regions. It encodes 111 genes, including 77 protein-coding genes (PCGs), 30 tRNAs and 4 rRNAs. The nucleotide composition is asymmetric (31.6% A, 18.1% C, 18.7% G and 31.6% T) with an overall A+T content of 73.2%. Three types of 111 simple sequence repeats (SSRs) were detected in the plastome, including 107 mono- and 4 di-nucleotide repeats. The newly sequenced complete plastome and identified SSRs will help in understanding the plastome evolution and genetic conservation of S. bouffordiana.

关键词Salweenia Bouffordiana Endangered Species Plastome Ssr Leguminosae
语种英语
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文献类型期刊论文
条目标识符http://ir.kib.ac.cn/handle/151853/61686
专题中国科学院东亚植物多样性与生物地理学重点实验室
作者单位1.Chinese Acad Sci, Kunming Inst Bot, Key Lab Plant Divers & Biogeog East Asia, Kunming, Yunnan, Peoples R China
2.Chinese Acad Sci, Germplasm Bank Wild Species, Kunming Inst Bot, Kunming, Yunnan, Peoples R China
3.Univ Chinese Acad Sci, Beijing, Peoples R China
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Wariss, Hafiz Muhammad,Yi, Ting-Shuang,Wang, Hong,et al. The chloroplast genome of a rare and an endangered species Salweenia bouffordiana (Leguminosae) in China[J]. CONSERVATION GENETICS RESOURCES,2018,10(3):405-407.
APA Wariss, Hafiz Muhammad,Yi, Ting-Shuang,Wang, Hong,&Zhang, Rong.(2018).The chloroplast genome of a rare and an endangered species Salweenia bouffordiana (Leguminosae) in China.CONSERVATION GENETICS RESOURCES,10(3),405-407.
MLA Wariss, Hafiz Muhammad,et al."The chloroplast genome of a rare and an endangered species Salweenia bouffordiana (Leguminosae) in China".CONSERVATION GENETICS RESOURCES 10.3(2018):405-407.
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