Characterization of the complete chloroplast genome of Xanthoceras sorbifolium, an endangered oil tree

doi:10.1007/s12686-017-0732-2

	Characterization of the complete chloroplast genome of Xanthoceras sorbifolium, an endangered oil tree
	Chen, Si-Yun 2; Zhang, Xian-Zhi1
	2017-12-01
发表期刊	CONSERVATION GENETICS RESOURCES
ISSN	1877-7252
卷号	9 期号:4 页码:595-598
摘要	Xanthoceras sorbifolium is an important biodiesel tree in northern China, but its natural population is now very fragmented and in decline. Here we assembled and characterized the complete chloroplast (cp) genome of X. sorbifolium using Illumina pair-end sequencing data. The X. sorbifolium cp genome was 161,231 bp in size, containing a large single copy region (LSC) of 85,299 bp and a small single copy region (SSC) of 18,692 bp separated by a pair of inverted repeats (IRs) of 28,620 bp. The genome had 132 genes, including 86 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The overall GC content of the X. sorbifolium cp genome was 37.7%, with the corresponding values of LSC, SSC and IR regions being 36.0, 31.7 and 42.3%, respectively. The phylogenomic analysis strongly supported that X. sorbifolium diverged firstly in Sapindaceae. This complete cp genome will be useful for further studies of this endangered plant.
关键词	Xanthoceras Sorbifolium Chloroplast Genome Phylogenomics Conservation
DOI	10.1007/s12686-017-0732-2
语种	英语
WOS记录号	WOS:000415188400018
引用统计
文献类型	期刊论文
条目标识符	http://ir.kib.ac.cn/handle/151853/60623
专题	中国西南野生生物种质资源库
作者单位	1.Northwest A&F Univ, Coll Forestry, Yangling 712100, Shaanxi, Peoples R China 2.Chinese Acad Sci, Kunming Inst Bot, Germplasm Bank Wild Species, Kunming 650201, Yunnan, Peoples R China
推荐引用方式 GB/T 7714	Chen, Si-Yun,Zhang, Xian-Zhi. Characterization of the complete chloroplast genome of Xanthoceras sorbifolium, an endangered oil tree[J]. CONSERVATION GENETICS RESOURCES,2017,9(4):595-598.
APA	Chen, Si-Yun,&Zhang, Xian-Zhi.(2017).Characterization of the complete chloroplast genome of Xanthoceras sorbifolium, an endangered oil tree.CONSERVATION GENETICS RESOURCES,9(4),595-598.
MLA	Chen, Si-Yun,et al."Characterization of the complete chloroplast genome of Xanthoceras sorbifolium, an endangered oil tree".CONSERVATION GENETICS RESOURCES 9.4(2017):595-598.

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