Characterization of the complete chloroplast genome of Elaeagnus mollis, a rare and endangered oil plant

doi:10.1007/s12686-017-0706-4

	Characterization of the complete chloroplast genome of Elaeagnus mollis, a rare and endangered oil plant
	Wang, Wen-Cai 2; Chen, Si-Yun 3; Zhang, Xian-Zhi1
	2017-09-01
发表期刊	CONSERVATION GENETICS RESOURCES
ISSN	1877-7252
卷号	9 期号:3 页码:439-442
摘要	Elaeagnus mollis is a rare and endangered oil tree species endemic to China. Here we assembled and characterized its whole chloroplast (cp) genome using Illumina pair-end sequencing data. The E. mollis cp genome was 151,428 bp in length, containing a large single copy region (LSC) of 81,003 bp and a small single copy region (SSC) of 18,561 bp separated by a pair of inverted repeats (IRs) of 25,932 bp. The genome possessed 131 genes, including 85 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Most of genes occurred as single-copy, while 18 gene species had two copies. The overall GC content of the E. mollis cp genome was 37.0%, and the corresponding values of LSC, SSC and IR regions were 35.0, 30.3 and 42.2%, respectively. The phylogenomic analysis revealed that E. mollis clustered with E. macrophylla in Elaeagnaceae, which was closely related to Moraceae and Cannabaceae belonging to Rosales.
关键词	Elaeagnus Mollis Chloroplast Genome Phylogenomics Conservation
学科领域	Biodiversity Conservation ; Genetics & Heredity
DOI	10.1007/s12686-017-0706-4
收录类别	SCI
语种	英语
WOS记录号	WOS:000407231600023
引用统计	被引频次：8[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.kib.ac.cn/handle/151853/54910
专题	中国西南野生生物种质资源库
作者单位	1.Northwest A&F Univ, Coll Forestry, Yangling 712100, Shaanxi, Peoples R China 2.Queen Mary Univ London, Sch Biol & Chem Sci, Mile End Rd, London E1 4NS, England 3.Chinese Acad Sci, Kunming Inst Bot, Germplasm Bank Wild Species, Kunming 650201, Yunnan, Peoples R China
推荐引用方式 GB/T 7714	Wang, Wen-Cai,Chen, Si-Yun,Zhang, Xian-Zhi. Characterization of the complete chloroplast genome of Elaeagnus mollis, a rare and endangered oil plant[J]. CONSERVATION GENETICS RESOURCES,2017,9(3):439-442.
APA	Wang, Wen-Cai,Chen, Si-Yun,&Zhang, Xian-Zhi.(2017).Characterization of the complete chloroplast genome of Elaeagnus mollis, a rare and endangered oil plant.CONSERVATION GENETICS RESOURCES,9(3),439-442.
MLA	Wang, Wen-Cai,et al."Characterization of the complete chloroplast genome of Elaeagnus mollis, a rare and endangered oil plant".CONSERVATION GENETICS RESOURCES 9.3(2017):439-442.

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