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Darwin's preadaptation hypothesis and the phylogenetic structure of native and alien regional plant assemblages across North America 期刊论文
GLOBAL ECOLOGY AND BIOGEOGRAPHY, 2022, 卷号: 31, 期号: 3, 页码: 531-545
Authors:  Qian,Hong;  Sandel,Brody
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angiosperms  community assembly  Darwin's preadaptation hypothesis  environmental filtering  exotic species  introduced species  niche conservatism  niche convergence  phylogenetic dispersion  phylogenetic structure  NATURALIZATION HYPOTHESIS  FLORISTIC ANALYSIS  SPECIES-DIVERSITY  ECOLOGY  CONUNDRUM  PATTERNS  INVASIVENESS  RELATEDNESS  GRADIENTS  INVASIONS  
Evolutionary innovations through gain and loss of genes in the ectomycorrhizal Boletales 期刊论文
NEW PHYTOLOGIST, 2022, 卷号: 233, 期号: 3, 页码: 1383-1400
Authors:  Wu,Gang;  Miyauchi,Shingo;  Morin,Emmanuelle;  Kuo,Alan;  Drula,Elodie;  Varga,Torda;  Kohler,Annegret;  Feng,Bang;  Cao,Yang;  Lipzen,Anna;  Daum,Christopher;  Hundley,Hope;  Pangilinan,Jasmyn;  Johnson,Jenifer;  Barry,Kerrie;  LaButti,Kurt;  Ng,Vivian;  Ahrendt,Steven;  Min,Byoungnam;  Choi,In-Geol;  Park,Hongjae;  Plett,Jonathan M.;  Magnuson,Jon;  Spatafora,Joseph W.;  Nagy,Laszlo G.;  Henrissat,Bernard;  Grigoriev,Igor V.;  Yang,Zhu-Liang;  Xu,Jianping;  Martin,Francis M.
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Boletales  brown-rot fungi  CAZymes  comparative genomics  ectomycorrhizal fungi  trait evolution  R/BIOCONDUCTOR PACKAGE  PHYLOGENETIC ANALYSIS  HOST-SPECIFICITY  FUNGI  GENUS  DIVERSITY  
Genomic insights into the origin, domestication and genetic basis of agronomic traits of castor bean 期刊论文
GENOME BIOLOGY, 2021, 卷号: 22, 期号: 1, 页码: 113
Authors:  Xu,Wei;  Wu,Di;  Yang,Tianquan;  Sun,Chao;  Wang,Zaiqing;  Han,Bing;  Wu,Shibo;  Yu,Anmin;  Chapman,Mark A.;  Muraguri,Sammy;  Tan,Qing;  Wang,Wenbo;  Bao,Zhigui;  Liu,Aizhong;  Li,De-Zhu
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Genomic evolution  Domestication  Population genetics  GWAS  Castor bean  SINGLE NUCLEOTIDE POLYMORPHISMS  SEED SIZE  PHYLOGENETIC ANALYSIS  CELL ELONGATION  PLANT-GROWTH  ARABIDOPSIS  ANNOTATION  PROVIDES  YIELD  TOOL  
High-quality evergreen azalea genome reveals tandem duplication-facilitated low-altitude adaptability and floral scent evolution 期刊论文
PLANT BIOTECHNOLOGY JOURNAL, 2021, 卷号: 19, 期号: 12, 页码: 2544-2560
Authors:  Wang,Xiuyun;  Gao,Yuan;  Wu,Xiaopei;  Wen,Xiaohui;  Li,Danqing;  Zhou,Hong;  Li,Zheng;  Liu,Bing;  Wei,Jianfen;  Chen,Fei;  Chen,Feng;  Zhang,Chengjun;  Zhang,Liangsheng;  Xia,Yiping
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Azalea  Rhododendron ovatum  altitude  adaptability  floral scent  terpene synthase (TPS)  tandem duplication  defence response  PHYLOGENETIC ANALYSIS  TERPENE SYNTHASES  PLANT VOLATILES  SALICYLIC-ACID  JASMONIC ACID  WHOLE-GENOME  GENE  DIVERSITY  TOOL  TRANSCRIPTOME  
Genomic basis of high-altitude adaptation in Tibetan Prunus fruit trees 期刊论文
CURRENT BIOLOGY, 2021, 卷号: 31, 期号: 17, 页码: 3848+
Authors:  Wang,Xia;  Liu,Shengjun;  Zuo,Hao;  Zheng,Weikang;  Zhang,Shanshan;  Huang,Yue;  Pingcuo,Gesang;  Ying,Hong;  Zhao,Fan;  Li,Yuanrong;  Liu,Junwei;  Yi,Ting-Shuang;  Zan,Yanjun;  Larkin,Robert M.;  Deng,Xiuxin;  Zeng,Xiuli;  Xu,Qiang
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R-PACKAGE  PHYLOGENETIC ANALYSIS  ANALYSIS TOOLKIT  ANALYSIS REVEALS  WEB SERVER  SELECTION  ELEMENT  IDENTIFICATION  ALIGNMENT  ACCURATE  
Looking for the undiscovered asexual taxa: case studies from lesser studied life modes and habitats 期刊论文
MYCOSPHERE, 2021, 卷号: 12, 期号: 1, 页码: 1186-1229
Authors:  Wijayawardene,N. N.;  Phillips,A. J. L.;  Tibpromma,S.;  Dai,D. Q.;  Selbmann,L.;  Monteiro,J. S.;  Aptroot,A.;  Flakus,A.;  Rajeshkumar,K. C.;  Coleine,C.;  Pereira,D. C.;  Fan,X.;  Zhang,L.;  Maharachchikumbura,S. S. N.;  Souza,M. F.;  Kukwa,M.;  Suwannarach,N.;  Rodriguez-Flakus,P.;  Ashtekar,N.;  Dauner,L.;  Tang,L. Z.;  Jin,X. C.;  Karunarathna,S. C.
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7 new taxa    Ascomycota    DNA sequences    fungal diversity  habitat  life modes  phylogeny    taxonomy  ROCK-INHABITING FUNGI  LICHENICOLOUS FUNGI  SP-NOV  ENDOPHYTIC FUNGI  BLACK FUNGI  PYRENOCARPOUS LICHENS  PHYLOGENETIC ANALYSIS  INCERTAE SEDIS  SEQUENCE DATA  SP. NOV.  
New Genes Interacted With Recent Whole-Genome Duplicates in the Fast Stem Growth of Bamboos 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2021, 卷号: 38, 期号: 12, 页码: 5752-5768
Authors:  Jin,Guihua;  Ma,Peng-Fei;  Wu,Xiaopei;  Gu,Lianfeng;  Long,Manyuan;  Zhang,Chengjun;  Li,De-Zhu
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fast stem growth  orphan genes  de novo genes  WGD  woody bamboos  evolutionary innovation  EVOLUTIONARY ORIGIN  DROSOPHILA-MELANOGASTER  PHYLOGENETIC ANALYSIS  VERTEBRATE EVOLUTION  RAPID EVOLUTION  HUMAN TISSUE  YOUNG GENES  TRANSCRIPTION  EXPRESSION  HOURGLASS  
Arundinella tengchongensis (Poaceae), a name at new rank and newly combined based on morphological and molecular data 期刊论文
NORDIC JOURNAL OF BOTANY, 2021, 卷号: 39, 期号: 10
Authors:  Jiang,Li-Qiong;  Peng,Hua;  Wang,Yue-Hua
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Arundinella setosa  Arundinelleae  China  molecular phylogeny  morphological comparison  PHYLOGENETIC ANALYSIS  CHLOROPLAST  TAXA  
High-quality genome assembly of an important biodiesel plant, Euphorbia lathyris L. 期刊论文
DNA RESEARCH, 2021, 卷号: 28, 期号: 6, 页码: dsab022
Authors:  Wang,Mingcheng;  Gu,Zhijia;  Fu,Zhixi;  Jiang,Dechun
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caper spurge  biodiesel plant  genome assembly  nanopore sequencing  oil metabolism  PHYLOGENETIC ANALYSIS  FOSSIL-FUELS  ANNOTATION  TOOL  IDENTIFICATION  PREDICTION  DATABASE  SEEDS  GENE  
The complete mitochondrial genome of Ophiocordyceps gracilis and its comparison with related species 期刊论文
IMA FUNGUS, 2021, 卷号: 12, 期号: 1, 页码: 31
Authors:  Abuduaini,Aifeire;  Wang,Yuan-Bing;  Zhou,Hui-Ying;  Kang,Rui-Ping;  Ding,Ming-Liang;  Jiang,Yu;  Suo,Fei-Ya;  Huang,Luo-Dong
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Mitochondrial genome  Phylogenetic analysis  Ophiocordyceps gracilis  Ophiocordycipitaceae  GROUP-I  CATERPILLAR FUNGUS  AGARICUS-BISPORUS  SEQUENCE  EVOLUTION  HYPOCREALES  CORDYCEPS  REVEALS  OPHIOCORDYCIPITACEAE  VARIABILITY