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资助项目
0.05) between wild (AR = 4.651), semi-cultivated (AR = 5.091) and cultivated (AR = 5.132) populations of C. taliensis, which suggested that the genetic background of long-lived woody plant was not easy to be changed, and there were moderate high gene flow between populations. However, there was a significant difference (P < 0.05) between wild (AR = 5.9) and cultivated (AR = 7.1) populations distributed in the same place in Yun county, Yunnan province, which may result from the hybridization and introgression of species in the tea garden and anthropogenic damages to the wild population. The hypothesis of hybrid origin of C. grandibracteata was tested by morphological and microsatellites analyses. Compared with other species, the locules in ovary of C. grandibracteata are variable, which showed a morphological intermediate and mosaic. Except one private allele, Ninety-nine percent alleles of C. grandibracteata were shared with these of C. taliensis and C. sinensis var. assamica. And C. grandibracteata was nested in the cluster of C. taliensis in the UPGMA tree. Conclusively, our results supported the hypothesis of hybrid origin of C. grandibracteata partly. The speciation of C. grandibracteata was derived from hybridization and asymmetrical introgression potentially. It is possible that C. taliensis was one of its parents, but it still needs more evidences to prove that C. sinensis var. assamica was another 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Council Scholarship","jscount":"1","jsurl":"/simple-search?field1=all&field=dc.type_filter&advanced=false&query1=River%2Bvalley&&fq=dc.project.title_filter%3AChina%5C+Council%5C+Scholarship"},{"jsname":"Chinese Academy of Sciences","jscount":"1","jsurl":"/simple-search?field1=all&field=dc.type_filter&advanced=false&query1=River%2Bvalley&&fq=dc.project.title_filter%3AChinese%5C+Academy%5C+of%5C+Sciences"},{"jsname":"Chinese Academy of Sciences[2013T2S0030]","jscount":"1","jsurl":"/simple-search?field1=all&field=dc.type_filter&advanced=false&query1=River%2Bvalley&&fq=dc.project.title_filter%3AChinese%5C+Academy%5C+of%5C+Sciences%5C%5B2013T2S0030%5C%5D"},{"jsname":"Cluster of Excellence COTE[ANR-10-LABX-45]","jscount":"1","jsurl":"/simple-search?field1=all&field=dc.type_filter&advanced=false&query1=River%2Bvalley&&fq=dc.project.title_filter%3ACluster%5C+of%5C+Excellence%5C+COTE%5C%5BANR%5C-10%5C-LABX%5C-45%5C%5D"},{"jsname":"ECOLPIN[AGL2011-24296]","jscount":"1","jsurl":"/simple-search?field1=all&field=dc.type_filter&advanced=false&query1=River%2Bvalley&&fq=dc.project.title_filter%3AECOLPIN%5C%5BAGL2011%5C-24296%5C%5D"},{"jsname":"EU MSCA individual fellowship[705432]","jscount":"1","jsurl":"/simple-search?field1=all&field=dc.type_filter&advanced=false&query1=River%2Bvalley&&fq=dc.project.title_filter%3AEU%5C+MSCA%5C+individual%5C+fellowship%5C%5B705432%5C%5D"},{"jsname":"EU MSCA individual fellowship[750252]","jscount":"1","jsurl":"/simple-search?field1=all&field=dc.type_filter&advanced=false&query1=River%2Bvalley&&fq=dc.project.title_filter%3AEU%5C+MSCA%5C+individual%5C+fellowship%5C%5B750252%5C%5D"},{"jsname":"European Research Council through the Advanced Grant Project TREEPEACE[FP7-339728]","jscount":"1","jsurl":"/simple-search?field1=all&field=dc.type_filter&advanced=false&query1=River%2Bvalley&&fq=dc.project.title_filter%3AEuropean%5C+Research%5C+Council%5C+through%5C+the%5C+Advanced%5C+Grant%5C+Project%5C+TREEPEACE%5C%5BFP7%5C-339728%5C%5D"},{"jsname":"Flower scent is a very important character in rose breeding. However, many of 25,000 rose cultivars have no scent or weak scent. The tea scent of modern roses mainly originated from Rosa odorata (Andrews) Sweet, which is one of the most important ancestors of modern cultivated roses and the very important rose breeding resource. Due to the land expanding, habitat fragmentation and so on, R. odorata has been listed as an endangered species in ‘Chinese Plant Red Data Book—Rare and Endangered Plants’ and as the third-category endangered species in ‘Chinese Rare and Endangered Protective Plants List’. Therefore, it is urgent to protect this species and studying the conservation genetics of R. odorata is essentially important to work out a strategy of conservation.R. odorata comprises three double-petaled varieties (R. odorata var. odorata, R. odorata var. erubescens, and R. odorata var. pseudindica) and one single-petaled variety (R. odorata var. gigantea). The taxonomy of the three double-petaled varieties of R. odorata has been disputed for a long time. They have been treated as intraspecific taxa of R. odorata var. gigantea or R. chinensis by different botanist. According to the morphological analyses, Hurst (1941) inferred that R. odorata var. odorata was the hybrid between R. odorata var. gigantea and R. chinensis. Therefore, in order to clarify the right protective units, two single-copy nuclear genes (GAPDH and ncpGS), together with two plastid loci (trnL-F and psbA-trnH) were applied to study the hybrid origin of the three double-petaled varieties and to identify their possible parents. Our data suggested the hybrid origin of the three double-petaled varieties. We inferred that R. odorata var. gigantea could be the maternal parent and R. chinensis cultivars be the paternal parent. It is strongly suggested that the conservation of R. odorata is the conservation of its wild type, R. odorata var. gigantea. We first applied seven microsatellite loci (SSR) coupled with a single-copy nuclear gene GAPDH to study the genetic diversity and genetic structure of R. odorata var. gigantea. The main results are shown as follows:1. Genetic diversity：R. odorata var. gigantea maintains high degree of genetic diversity within and among populations (SSR: HT = 0.738, HS = 0.569, AR = 5.583, PPB = 97.35%, I = 1.703; GAPDH: HT = 0.739, HS = 0.540). We inferred that, outcrossing, long-lived tree species, clonal reproduction and general intraspecies hybridization between individuals, have contributed to the high degree of genetic diversity in R. odorata var. gigantea.2. Genetic differentiation and genetic structure：There was some degree of genetic differentiation among populations (SSR: GST = 0.229, FST = 0.240; GAPDH: GST = 0.269). The geographic isolation limited the dispersal of pollen or seeds, which resulted in the limitation of gene flow (Nm = 0.792). Then, the limited gene flow should be accounted for the genetic differentiation. Both the results of SSR data and haplotype analysis of GAPDH indicated that, the studied populations were divided into two distinct groups by Honghe River. These two groups showed significant genetic differentiation and represented two separate evolutionary lineages, which should be recognized as two evolutionary significant units (ESUs) for conservation concerns.3. Conservation of R. odorata：R. odorata var. gigantea has been listed in the ‘National Key Protective Wild Species List (II)’. Therefore, the conservation of this species is urgent. We inferred that, the main endangered reasons should be the habitat fragmentation and the reduction of populations and individuals per population resulted from environmental damage and human activities. We proposed that the strategy of in-situ conservation combining with ex-situ conservation should be carried 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the rapid uplift of the Himalaya, the reorganization of the major river drainages was primarily caused by river capture events，e.g. those of the Jinshajiang River (comprising the Upper, Middle and Lower Jinshajiang) and its tributaries (Yalongjiang, Daduhe, Jialingjiang), the Nujiang, the Lancangjiang, and the Honghe. We selected Terminalia franchetii var. franchetii and T. franchetii var. intricata in the Sino-Himalayan region to study the relationship with Honghe diversion events. The distribution of this species is predicted to have retained genetic signatures of past hydrological landscape structures. The major result as flowing:1. Chloroplast phylogeography of T. franchetii based on haplotype analysis，Based on a range-wide sampling comprising 28 populations and 258 individuals, and using chloroplast DNA sequences (trnL-trnF, petL-psbE), we detected 12 haplotypes. Terminalia franchetii was found to harbour high haplotype diversity (hT = 0.784) but low average within-population diversity (hS = 0.124). The analysis of genetic structure using SAMOVA showed that the number of population groups equaled five, and all the haplotypes can be divided into five groups. Group B and C identified exhibited a disjunctive distribution of dominant haplotypes between northern and southern valleys, corresponding to the geography of past rather than modern drainage systems.Mismatch distribution (multimodal curve) and neutral tests provided no evidence of recent demographic population growth. We suggest that the modern disjunctive distribution of T. franchetii, and associated patterns of cpDNA haplotype variation, result from vicariance caused by several historical river separation and capture events. By assuming a common mutation rate of the cpDNA-IGS regions, our inferred timings of these events (0.82-4.39 Mya) broadly agrees with both previous geological and molecular estimated time of drainage rearrangements in this region. So we conclude that there were several historical vicariance events play a major role for the distribution of T. franchetii in this region.2. Genetic diversity and structure of T. franchetii var. franchetii based on AFLP analysis，We determined the genotype of 251 individuals of T. franchetii var. franchetii from 21 populations using amplified fragment length polymorphism (AFLP), for our aim is only investigated the relationship between the modern distribution of T. franchetii and geological changes in drainage patterns. The overall estimate of genetic structure (Gst) was 0.249, indicating that clear genetic differentiation existed among the populations. Estimates of gene flow (Nm = 0.754) between populations based on the Gst value revealed that the number of migrants per generation is not frequently.Using Neighbor-Joining tree, Principal Coordinates Analysis, STRUCTURE and network methods, Analyses of AFLP markers identified two main population groups (I and II) and four subgroups (A – D) of T. franchetii. Genetic diversity was lower in Group I than in Group II. The results show that Groups I and II probably once occupied continuous areas respectively along ancient drainage systems and there were several historical separation and capture events that can account for the distribution of T. franchetii in this region. After all，these are good examples of the way in which historical events can change a species’ distribution from continuous to fragmented (Jinshajiang/ Yalongjiang and Honghe), and a disjunct distribution to a continuous one (Upper/Lower Jinshajiang and Yalongjiang). The results provide new insights into the phylogeographic pattern of plants in southwest China.3. Relationships between T. franchetii var. franchetii and T. franchetii var. intricata ，While T. franchetii var. Franchetii and var. intricata slightly differ in overall size and leaf hairiness, these taxa did not exhibit reciprocal monophyly. As results show, the genetic difference between the two varieties is much smaller than that within var. franchetii (Salween population vs. other populationsof this variety). It is also revealed in a phylogenetic analysis of ITS region of Combretoideae. The habitats of var. franchetii and var. intricata have obviously difference. Thus, the differences between the two varieties in overall size and leaf hairiness might reflect different phenotypic responses to environmental changes and the divergent environmental niche spaces they occupy. Based on the reasoning above, we agree with Flora of China that “T. intricata” represents a variety of T. franchetii rather than a separate 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Bank of Wild Species in Southwest China","jscount":"1","jsurl":"/simple-search?field1=all&field=dc.type_filter&advanced=false&query1=River%2Bvalley&&fq=dc.project.title_filter%3AGermplasm%5C+Bank%5C+of%5C+Wild%5C+Species%5C+in%5C+Southwest%5C+China"},{"jsname":"Key Laboratory of Ethnomedicine (Minzu University of China) of Ministry of Education of China[KLEM-ZZ201806]","jscount":"1","jsurl":"/simple-search?field1=all&field=dc.type_filter&advanced=false&query1=River%2Bvalley&&fq=dc.project.title_filter%3AKey%5C+Laboratory%5C+of%5C+Ethnomedicine%5C+%5C%28Minzu%5C+University%5C+of%5C+China%5C%29%5C+of%5C+Ministry%5C+of%5C+Education%5C+of%5C+China%5C%5BKLEM%5C-ZZ201806%5C%5D"},{"jsname":"lastIndexed","jscount":"2024-05-15"}],"资助项目","dc.project.title_filter")'>
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