Chromosome-scale genome assembly and annotation of Cotoneaster glaucophyllus

doi:10.1038/s41597-024-03246-8

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	Chromosome-scale genome assembly and annotation of Cotoneaster glaucophyllus
	Meng, Kaikai; Liao, Wenbo; Wei, Shaolong; Chen, Sufang; Li, Mingwan; Ma, Yongpeng; Fan, Qiang
	2024
发表期刊	SCIENTIFIC DATA
卷号	11 期号:1 页码:406
摘要	Cotoneaster glaucophyllus is a semi-evergreen plant that blossoms in late summer, producing dense, attractive, fragrant white flowers with significant ornamental and ecological value. Here, a chromosome-scale genome assembly was obtained by integrating PacBio and Illumina sequencing data with the aid of Hi-C technology. The genome assembly was 563.3 Mb in length, with contig N50 and scaffold N50 values of similar to 6 Mb and similar to 31 Mb, respectively. Most (95.59%) of the sequences were anchored onto 17 pseudochromosomes (538.4 Mb). We predicted 35,856 protein-coding genes, 1,401 miRNAs, 655 tRNAs, 425 rRNAs, and 795 snRNAs. The functions of 34,967 genes (97.52%) were predicted. The availability of this chromosome-level genome will provide valuable resources for molecular studies of this species, facilitating future research on speciation, functional genomics, and comparative genomics within the Rosaceae family.
DOI	10.1038/s41597-024-03246-8
WOS记录号	WOS:001206345600011
引用统计
文献类型	期刊论文
条目标识符	http://ir.kib.ac.cn/handle/151853/75988
专题	中国科学院昆明植物研究所
推荐引用方式 GB/T 7714	Meng, Kaikai,Liao, Wenbo,Wei, Shaolong,et al. Chromosome-scale genome assembly and annotation of Cotoneaster glaucophyllus[J]. SCIENTIFIC DATA,2024,11(1):406.
APA	Meng, Kaikai.,Liao, Wenbo.,Wei, Shaolong.,Chen, Sufang.,Li, Mingwan.,...&Fan, Qiang.(2024).Chromosome-scale genome assembly and annotation of Cotoneaster glaucophyllus.SCIENTIFIC DATA,11(1),406.
MLA	Meng, Kaikai,et al."Chromosome-scale genome assembly and annotation of Cotoneaster glaucophyllus".SCIENTIFIC DATA 11.1(2024):406.

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