Finding correct names for economically important chanterelles (Cantharellus, Hydnaceae, Cantharellales) in southwestern China: a plea for third party annotation of sequences in GenBank

doi:10.5943/mycosphere/14/1/3

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	Finding correct names for economically important chanterelles (Cantharellus, Hydnaceae, Cantharellales) in southwestern China: a plea for third party annotation of sequences in GenBank
	Wang,X. H.; Hofstetter,V; Cao,S. Q.; Liu,P. G.; Buyck,B.
	2023
发表期刊	MYCOSPHERE
ISSN	2077-7019
卷号	14 期号:1 页码:153-194
摘要	One might think that the use of DNA sequences in species recognition will soon have solved all taxonomic confusions. This scenario, however, is not what happened in the taxonomy of chanterelles in the eastern and southern parts of Asia. To solve the name problems associated with chanterelles in southwestern China, we sequenced the loci ITS, LSU, rpb2 and(or) tef1 of 68 Cantharellus specimens collected in China and South Korea, including the holotypes of C. albovenosus, C. tuberculosporus, C. versicolor and C. zangii. We used these sequences to link species described from China, India, Japan and South Korea. We took an in-depth look at available sequence data for Indian Cantharellus that have caused a lot of taxonomic confusions. We found most DNA data related with Asian chanterelles have flaws concerning either wrong sequences, unreliable base pairs, or confusing metadata. These problems, together with over-interpretation of genetic and morphological variation, are responsible for many synonyms. Taxonomically, we reached the following conclusions: C. yunnanensis is a Craterellus; C. tuberculosporus is a very rare Himalayan species close to C. cibarius; C. versicolor is the most common subalpine golden chanterelle in the Himalayas; the earliest available name for the bulk of marketed, yellow, medium-sized chanterelles in temperate and subtropical China is C. applanatus, not C. yunnanensis; Cantharellus anzutake, C. himalayensis and C. natarajanii are all synonyms of C. applanatus; C. sinominor and C. subminor are later synonyms of the Indian C. elongatipes; C. sikkimensis is conspecific with C. zangii; C. albovenosus is merely a white-gilled form of C. phloginus. Allowing third party annotations or comments directly in the nucleotide database of NCBI would constitute a much more efficient way to signal errors or omissions concerning both sequences and their associated metadata deposited in GenBank.
关键词	Craterellus holotype- INDELs ITS morphology species recognition TRUE MORELS MORCHELLA PHYLOGENETIC-RELATIONSHIPS GENERIC LIMITS RIBOSOMAL DNA 1ST RECORD SP-NOV. BASIDIOMYCOTA LACTARIUS FUNGI RUSSULALES
学科领域	Mycology
DOI	10.5943/mycosphere/14/1/3
WOS记录号	WOS:000962021200001
引用统计
文献类型	期刊论文
条目标识符	http://ir.kib.ac.cn/handle/151853/75081
专题	中国科学院昆明植物研究所
推荐引用方式 GB/T 7714	Wang,X. H.,Hofstetter,V,Cao,S. Q.,et al. Finding correct names for economically important chanterelles (Cantharellus, Hydnaceae, Cantharellales) in southwestern China: a plea for third party annotation of sequences in GenBank[J]. MYCOSPHERE,2023,14(1):153-194.
APA	Wang,X. H.,Hofstetter,V,Cao,S. Q.,Liu,P. G.,&Buyck,B..(2023).Finding correct names for economically important chanterelles (Cantharellus, Hydnaceae, Cantharellales) in southwestern China: a plea for third party annotation of sequences in GenBank.MYCOSPHERE,14(1),153-194.
MLA	Wang,X. H.,et al."Finding correct names for economically important chanterelles (Cantharellus, Hydnaceae, Cantharellales) in southwestern China: a plea for third party annotation of sequences in GenBank".MYCOSPHERE 14.1(2023):153-194.

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