Glaciibacter flavus sp. nov., isolated from a lichen sample

doi:10.1007/s00203-021-02247-0

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	Glaciibacter flavus sp. nov., isolated from a lichen sample
	An,De-Feng ; Jiang,Long-Qian ; Zhang,Kun ; Li,Gui-Ding ; Wang,Xin-Yu ; Jiang,Ming-Guo ; Lang,Lei ; Wang,Li-Song ; Imhoff,Johannes F.; Jiang,Cheng-Lin ; Jiang,Yi
	2021
发表期刊	ARCHIVES OF MICROBIOLOGY
ISSN	0302-8933
卷号	203 期号:5 页码:2439-2444
摘要	A novel Actinobacterium strain YIM 131861( T), was isolated from lichen collected from the South Bank Forest of the Baltic Sea, Germany. It was Gram-stain-positive, strictly aerobic, catalase positive and oxidase negative, yellow pigmented. Cells were motile with a polar flagellum, irregular rod shaped and did not display spore formation. The strain grew at 15 - 30 degrees C (optimum 25 degrees C), at pH 6.0 - 10.0 (optimum pH 7.0) and in the presence of 0 - 1.5% (w/v) NaCl (optimum 1%). Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain YIM 131861( T) belonged to the genus Glaciibacter, and exhibited a high sequence similarity (96.4%) with Glaciibacter superstes NBRC 104264( T). The genomic DNA G + C content of strain YIM 131861( T) was 68.2 mol%. The average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values between strain YIM 131861( T) and Glaciibacter superstes NBRC 104264( T) were 73.2 and 19.9% based on the draft genome sequence. The cell-wall peptidoglycan type was B2 gamma and contained the 2, 4-diaminobutyric acid as the diagnostic amino acid. Whole cell sugars were galactose, rhamnose, ribose and glucose. It contained MK-12 and MK-13 as the predominant menaquinones. The major cellular fatty acids (> 10%) were identified as anteiso-C-15:0, iso-C-16:0 and anteiso-C-17:0. The polar lipids were diphosphatidylglycerol, phosphatidylglycerol and two unknown glycolipids. Based on the results of phenotypic, chemotaxonomic and phylogenetic analyses, strain YIM 131861( T) should belong to the genus Glaciibacter and represents a novel species of the genus Glaciibacter, for which the name Glaciibacter flavus sp. nov. is proposed. The type strain is YIM 131861( T) (= CGMCC 1.16588( T) = NBRC 113572( T)).
关键词	Glaciibacter Glaciibacter flavus sp nov Lichen
DOI	10.1007/s00203-021-02247-0
WOS记录号	WOS:000625600400004
引用统计
文献类型	期刊论文
条目标识符	http://ir.kib.ac.cn/handle/151853/73579
专题	中国科学院昆明植物研究所
作者单位	1.[An, De-Feng 2.Jiang, Long-Qian 3.Zhang, Kun 4.Li, Gui-Ding 5.Lang, Lei 6.Jiang, Cheng-Lin 7.Yunnan Univ, Yunnan Inst Microbiol, Sch Life Sci, Key Lab Conservat & Utilizat Bioresource, Kunming, Yunnan, Peoples R China 8.Northeastern Univ, Inst Microbial Pharmaceut, Shenyang 110819, Peoples R China 9.[Wang, Xin-Yu 10.Chinese Acad Sci, Kunming Inst Bot, Key Lab Plant Div & Biogeog East Asia, Kunming 650201, Yunnan, Peoples R China 11.Guangxi Univ Nationalities, Sch Marine Sci & Biotechnol, Guangxi Key Lab Polysaccharide Mat & Modificat, Nanning 530008, Peoples R China 12.[Imhoff, Johannes F.] GEOMAR Helmholtz Ctr Ocean Res Kiel, Wischhofstr 1-3, D-24148 Kiel, Germany
推荐引用方式 GB/T 7714	An,De-Feng,Jiang,Long-Qian,Zhang,Kun,et al. Glaciibacter flavus sp. nov., isolated from a lichen sample[J]. ARCHIVES OF MICROBIOLOGY,2021,203(5):2439-2444.
APA	An,De-Feng.,Jiang,Long-Qian.,Zhang,Kun.,Li,Gui-Ding.,Wang,Xin-Yu.,...&Jiang,Yi.(2021).Glaciibacter flavus sp. nov., isolated from a lichen sample.ARCHIVES OF MICROBIOLOGY,203(5),2439-2444.
MLA	An,De-Feng,et al."Glaciibacter flavus sp. nov., isolated from a lichen sample".ARCHIVES OF MICROBIOLOGY 203.5(2021):2439-2444.

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