| Complete chloroplast genome of the threatened Rhoiptelea chiliantha (Juglandaceae s.l.) | |
Geng, Yan-Fei1,2,3; Hu, Guo-Xiong4 ; Wang, Shuo5; Xu, Jian-Chu1,6
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| 通讯作者 | Wang, Shuo(shuowang0811@163.com) ; Xu, Jian-Chu(jxu@mail.kib.ac.cn) |
| 2019-09-01 | |
| 发表期刊 | CONSERVATION GENETICS RESOURCES
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| ISSN | 1877-7252 |
| 卷号 | 11期号:3页码:317-319 |
| 摘要 | Rhoiptelea chiliantha is the only species of traditionally defined family Rhoipteleaceae which is confined to S Guizhou, SE Yunnan, N and W Guangxi of China as well as N Vietnam, and is evaluated as vulnerable (VU) in "The IUCN Red List Threatened Species" and "Chinese Species Red List". Here, we de novo assembled the complete chloroplast (cp) genome of R. chiliantha using Illumina sequencing data for the first time. The whole cp genome was 161,692 bp in length consisting of a pair of inverted repeat (IRa and IRb) regions of respectively 25,335 bp, a small single-copy region of 23,659 bp and a large single-copy region of 89,039 bp. The genome encoded 116 unique genes including 85 protein-coding genes, 27 tRNA genes and four rRNA genes. Phylogenetic analysis based on 21 complete cp genome sequences indicates that R. chiliantha is sister to the traditionally defined walnut family (Juglandaceae s.s.) and supports to merge Rhoipteleaceae into Juglandaceae s.l. |
| 关键词 | Rhoiptelea chiliantha Rhoipteleaceae Juglandaceae Chloroplast genome |
| DOI | 10.1007/s12686-018-1021-4 |
| 收录类别 | SCI |
| 语种 | 英语 |
| WOS记录号 | WOS:000480748400017 |
| 引用统计 | |
| 文献类型 | 期刊论文 |
| 条目标识符 | http://ir.kib.ac.cn/handle/151853/68371 |
| 专题 | 资源植物与生物技术所级重点实验室 |
| 通讯作者 | Wang, Shuo; Xu, Jian-Chu |
| 作者单位 | 1.Chinese Acad Sci, Kunming Inst Bot, Key Lab Econ Plants & Biotechnol, Kunming 650201, Yunnan, Peoples R China 2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China 3.Yunnan Univ, Inst Ecol & Geobot, Kunming 650091, Yunnan, Peoples R China 4.Guizhou Univ, Coll Life Sci, Guiyang 550025, Guizhou, Peoples R China 5.Qingdao Univ Sci & Technol, Coll Marine Sci & Biol Engn, Qingdao 266042, Shandong, Peoples R China 6.World Agroforestry Ctr East & Cent Asia, Kunming 650201, Yunnan, Peoples R China |
| 推荐引用方式 GB/T 7714 | Geng, Yan-Fei,Hu, Guo-Xiong,Wang, Shuo,et al. Complete chloroplast genome of the threatened Rhoiptelea chiliantha (Juglandaceae s.l.)[J]. CONSERVATION GENETICS RESOURCES,2019,11(3):317-319. |
| APA | Geng, Yan-Fei,Hu, Guo-Xiong,Wang, Shuo,&Xu, Jian-Chu.(2019).Complete chloroplast genome of the threatened Rhoiptelea chiliantha (Juglandaceae s.l.).CONSERVATION GENETICS RESOURCES,11(3),317-319. |
| MLA | Geng, Yan-Fei,et al."Complete chloroplast genome of the threatened Rhoiptelea chiliantha (Juglandaceae s.l.)".CONSERVATION GENETICS RESOURCES 11.3(2019):317-319. |
| 条目包含的文件 | ||||||
| 文件名称/大小 | 文献类型 | 版本类型 | 开放类型 | 使用许可 | ||
| Geng-2019-Complete c（1617KB） | 期刊论文 | 出版稿 | 开放获取 | CC BY-NC-SA | 浏览 请求全文 | |
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