| Global transcriptome analysis reveals extensive gene remodeling, alternative splicing and differential transcription profiles in non-seed vascular plant Selaginella moellendorffii | |
Zhu, Yan1; Chen, Longxian1,4; Zhang, Chengjun2 ; Hao, Pei3; Jing, Xinyun1; Li, Xuan1
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| 2017 | |
| 发表期刊 | BMC GENOMICS
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| ISSN | 1471-2164 |
| 卷号 | 18页码:1042 |
| 摘要 | Background: Selaginella moellendorffii, a lycophyte, is a model plant to study the early evolution and development of vascular plants. As the first and only sequenced lycophyte to date, the genome of S. moellendorffii revealed many conserved genes and pathways, as well as specialized genes different from flowering plants. Despite the progress made, little is known about long noncoding RNAs (lncRNA) and the alternative splicing (AS) of coding genes in S. moellendorffii. Its coding gene models have not been fully validated with transcriptome data. Furthermore, it remains important to understand whether the regulatory mechanisms similar to flowering plants are used, and how they operate in a non-seed primitive vascular plant. |
| 关键词 | S. Moellendorffii Lycophyte Vascular Plant Transcriptome Long Noncoding Rna Alternative Splicing Regulation Transcription |
| 学科领域 | Biotechnology & Applied Microbiology ; Genetics & Heredity |
| DOI | 10.1186/s12864-016-3266-1 |
| 收录类别 | SCI |
| 语种 | 英语 |
| WOS记录号 | WOS:000408766800011 |
| 引用统计 | |
| 文献类型 | 期刊论文 |
| 条目标识符 | http://ir.kib.ac.cn/handle/151853/54968 |
| 专题 | 植物化学与西部植物资源持续利用国家重点实验室 |
| 作者单位 | 1.Chinese Acad Sci, Shanghai Inst Biol Sci, CAS Ctr Excellence Mol Plant Sci, Inst Plant Physiol & Ecol,Key Lab Synthet Biol, Shanghai 200032, Peoples R China 2.Chinese Acad Sci, Kunming Inst Bot, Germplasm Bank Wild Species Southwest China, Kunming 650201, Yunnan, Peoples R China 3.Chinese Acad Sci, Inst Pasteur Shanghai, Key Lab Mol Virol & Immunol, Shanghai 200031, Peoples R China 4.Univ Chinese Acad Sci, Beijing 100049, Peoples R China |
| 推荐引用方式 GB/T 7714 | Zhu, Yan,Chen, Longxian,Zhang, Chengjun,et al. Global transcriptome analysis reveals extensive gene remodeling, alternative splicing and differential transcription profiles in non-seed vascular plant Selaginella moellendorffii[J]. BMC GENOMICS,2017,18:1042. |
| APA | Zhu, Yan,Chen, Longxian,Zhang, Chengjun,Hao, Pei,Jing, Xinyun,&Li, Xuan.(2017).Global transcriptome analysis reveals extensive gene remodeling, alternative splicing and differential transcription profiles in non-seed vascular plant Selaginella moellendorffii.BMC GENOMICS,18,1042. |
| MLA | Zhu, Yan,et al."Global transcriptome analysis reveals extensive gene remodeling, alternative splicing and differential transcription profiles in non-seed vascular plant Selaginella moellendorffii".BMC GENOMICS 18(2017):1042. |
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