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题名: Towards a natural classification and backbone tree for Pleosporaceae
作者: Ariyawansa, Hiran A.1, 2, 3, 4, 5; Thambugala, Kasun M.4, 5; Manamgoda, Dimuthu S.4, 5; Jayawardena, Ruvishika4, 5; Camporesi, Erio4, 5, 6; Boonmee, Saranyaphat4, 5; Wanasinghe, Dhanushka N.4, 5; Phookamsak, R.4, 5; Hongsanan, Singang4, 5; Singtripop, Chonticha4, 5; Chukeatirote, Ekachai4, 5; Kang, Ji-Chuan3; Jones, E. B. Gareth7; Hyde, Kevin D.1, 2, 4, 5
刊名: FUNGAL DIVERSITY
出版日期: 2015-03-01
卷号: 71, 期号:1, 页码:85-139
关键词: Backbone tree ; Dothideomycetes ; Pleosporales ; Plant pathogens ; Saprobes
学科分类: Mycology
DOI: 10.1007/s13225-015-0323-z
通讯作者: Hyde,KD (reprint author),Chinese Acad Sci,Key Lab Plant Div & Biogeog East Asia,Kunming Inst Bot,Kunming 650201,Peoples R China. ; kdhyde3@gmail.com
文章类型: Article
英文摘要: The family Pleosporaceae includes numerous saprobic, opportunistic human, and plant pathogenic taxa. The classification of genera and species Pleosporaceae has been a major challenge due to the lack of a clear understanding of the importance of the morphological characters used to distinguish taxa as well as the lack of reference strains. Recent treatments concluded that Pleospora and some other genera in Pleosporaceae are likely polyphyletic. In order to establish the evolutionary relationships and to resolve the polyphyletic nature of Pleospora and allied genera, we sequenced the 18S nrDNA, 28S nrDNA, ITS, GAPDH, RPB2 and TEF1-alpha gene regions of Pleosporaceae species and phylogenetically analysed this data. Multigene phylogenies strongly support the monophyletic nature of Pleosporaceae among the other families in Pleosporales, and the acceptance of the genera Alternaria, Bipolaris, Clathrospora, Comoclathris, Curvularia, Dactuliophora, Decorospora, Diademosa, Exserohilum, Extrawettsteinina, Gibbago, Neocamarosporium, Paradendryphiella, Platysporoides, Pleospora, Porocercospora, Pseudoyuconia and Pyrenophora. Austropleospora, Dendryphion, Edenia and Macrospora are excluded from the family based on morphology coupled with molecular data. Two novel species, Alternaria murispora in this paper and Comoclathris sedi are introduced. The sexual morph of Alternaria alternata is re-described and illustrated using modern concepts from fresh collections. The paraphyletic nature of Pleospora is resolved based on the available morpho-molecular data, but further sampling with fresh collections, reference or ex-type strains and molecular data are needed to obtain a natural classification of genera and the family.
类目[WOS]: Mycology
研究领域[WOS]: Mycology
关键词[WOS]: DOTHIDEOMYCETES INCERTAE-SEDIS ; MAXIMUM-LIKELIHOOD ; SPECIES RECOGNITION ; TAXONOMIC STATUS ; SEQUENCE DATA ; GENUS ; GENERA ; FUNGI ; NOV. ; COCHLIOBOLUS
收录类别: SCI
项目资助者: MFLU [56101020032] ; Mushroom Research Foundation, Chiang Rai, Thailand ; Chinese Academy of Sciences [2013T2S0030] ; agricultural science and technology foundation of Guizhou province [NY[2013]3042] ; international collaboration plan of Guizhou province [G[2012]7006] ; innovation team construction for science and technology of Guizhou province from the Science and Technology Department of Guizhou province, China [[2012]4007] ; Distinguished Scientist Fellowship Program (DSFP), King Saud University, Saudi Arabia
语种: 英语
WOS记录号: WOS:000352210200003
Citation statistics:
内容类型: 期刊论文
URI标识: http://ir.kib.ac.cn/handle/151853/20631
Appears in Collections:中国科学院东亚植物多样性与生物地理学重点实验室_期刊论文

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作者单位: 1.Chinese Acad Sci, Key Lab Plant Div & Biogeog East Asia, Kunming Inst Bot, Kunming 650201, Peoples R China
2.World Agroforestry Ctr, East Asia & Cent, Heilongtan 650201, Kunming, Peoples R China
3.Guizhou Univ, Engn & Res Ctr Southwest Biopharmaceut Resources, Natl Educ Minist China, Guiyang 550025, Guizhou, Peoples R China
4.Mae Fah Luang Univ, Sch Sci, Chiang Rai 57100, Thailand
5.Mae Fah Luang Univ, Inst Excellence Fungal Res, Chiang Rai 57100, Thailand
6.AMB Grp Micol Forlivese Antonio Cicognani, Forli, Italy
7.King Saudi Univ, Dept Bot & Microbiol, Riyadh, Saudi Arabia
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