Towards a natural classification and backbone tree for Pleosporaceae
Ariyawansa, Hiran A.1,2,3,4,5; Thambugala, Kasun M.4,5; Manamgoda, Dimuthu S.4,5; Jayawardena, Ruvishika4,5; Camporesi, Erio4,5,6; Boonmee, Saranyaphat4,5; Wanasinghe, Dhanushka N.4,5; Phookamsak, R.4,5; Hongsanan, Singang4,5; Singtripop, Chonticha4,5; Chukeatirote, Ekachai4,5; Kang, Ji-Chuan3; Jones, E. B. Gareth7; Hyde, Kevin D.1,2,4,5; Hyde,KD (reprint author),Chinese Acad Sci,Key Lab Plant Div & Biogeog East Asia,Kunming Inst Bot,Kunming 650201,Peoples R China.; kdhyde3@gmail.com
2015-03-01
发表期刊FUNGAL DIVERSITY
卷号71期号:1页码:85-139
摘要The family Pleosporaceae includes numerous saprobic, opportunistic human, and plant pathogenic taxa. The classification of genera and species Pleosporaceae has been a major challenge due to the lack of a clear understanding of the importance of the morphological characters used to distinguish taxa as well as the lack of reference strains. Recent treatments concluded that Pleospora and some other genera in Pleosporaceae are likely polyphyletic. In order to establish the evolutionary relationships and to resolve the polyphyletic nature of Pleospora and allied genera, we sequenced the 18S nrDNA, 28S nrDNA, ITS, GAPDH, RPB2 and TEF1-alpha gene regions of Pleosporaceae species and phylogenetically analysed this data. Multigene phylogenies strongly support the monophyletic nature of Pleosporaceae among the other families in Pleosporales, and the acceptance of the genera Alternaria, Bipolaris, Clathrospora, Comoclathris, Curvularia, Dactuliophora, Decorospora, Diademosa, Exserohilum, Extrawettsteinina, Gibbago, Neocamarosporium, Paradendryphiella, Platysporoides, Pleospora, Porocercospora, Pseudoyuconia and Pyrenophora. Austropleospora, Dendryphion, Edenia and Macrospora are excluded from the family based on morphology coupled with molecular data. Two novel species, Alternaria murispora in this paper and Comoclathris sedi are introduced. The sexual morph of Alternaria alternata is re-described and illustrated using modern concepts from fresh collections. The paraphyletic nature of Pleospora is resolved based on the available morpho-molecular data, but further sampling with fresh collections, reference or ex-type strains and molecular data are needed to obtain a natural classification of genera and the family.
关键词Backbone Tree Dothideomycetes Pleosporales Plant Pathogens Saprobes
资助信息MFLU [56101020032]; Mushroom Research Foundation, Chiang Rai, Thailand; Chinese Academy of Sciences [2013T2S0030]; agricultural science and technology foundation of Guizhou province [NY[2013]3042]; international collaboration plan of Guizhou province [G[2012]7006]; innovation team construction for science and technology of Guizhou province from the Science and Technology Department of Guizhou province, China [[2012]4007]; Distinguished Scientist Fellowship Program (DSFP), King Saud University, Saudi Arabia
学科领域Mycology
DOI10.1007/s13225-015-0323-z
收录类别SCI
语种英语
WOS研究方向Mycology
WOS类目Mycology
WOS记录号WOS:000352210200003
引用统计
被引频次:50[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
条目标识符http://ir.kib.ac.cn/handle/151853/20631
专题中国科学院东亚植物多样性与生物地理学重点实验室
通讯作者Hyde,KD (reprint author),Chinese Acad Sci,Key Lab Plant Div & Biogeog East Asia,Kunming Inst Bot,Kunming 650201,Peoples R China.; kdhyde3@gmail.com
作者单位1.Chinese Acad Sci, Key Lab Plant Div & Biogeog East Asia, Kunming Inst Bot, Kunming 650201, Peoples R China
2.World Agroforestry Ctr, East Asia & Cent, Heilongtan 650201, Kunming, Peoples R China
3.Guizhou Univ, Engn & Res Ctr Southwest Biopharmaceut Resources, Natl Educ Minist China, Guiyang 550025, Guizhou, Peoples R China
4.Mae Fah Luang Univ, Sch Sci, Chiang Rai 57100, Thailand
5.Mae Fah Luang Univ, Inst Excellence Fungal Res, Chiang Rai 57100, Thailand
6.AMB Grp Micol Forlivese Antonio Cicognani, Forli, Italy
7.King Saudi Univ, Dept Bot & Microbiol, Riyadh, Saudi Arabia
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Ariyawansa, Hiran A.,Thambugala, Kasun M.,Manamgoda, Dimuthu S.,et al. Towards a natural classification and backbone tree for Pleosporaceae[J]. FUNGAL DIVERSITY,2015,71(1):85-139.
APA Ariyawansa, Hiran A..,Thambugala, Kasun M..,Manamgoda, Dimuthu S..,Jayawardena, Ruvishika.,Camporesi, Erio.,...&kdhyde3@gmail.com.(2015).Towards a natural classification and backbone tree for Pleosporaceae.FUNGAL DIVERSITY,71(1),85-139.
MLA Ariyawansa, Hiran A.,et al."Towards a natural classification and backbone tree for Pleosporaceae".FUNGAL DIVERSITY 71.1(2015):85-139.
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