| Diversification and genetic differentiation of cultivated melon inferred from sequence polymorphism in the chloroplast genome | |
| Tanaka, Katsunori1; Akashi, Yukari2; Fukunaga, Kenji3; Yamamoto, Tatsuya4; Aierken, Yasheng5; Nishida, Hidetaka2; Long, Chun Lin6; Yoshino, Hiromichi6; Sato, Yo-Ichiro7; Kato, Kenji2 | |
| 通讯作者 | Kato, K (reprint author), Okayama Univ, Grad Sch Environm & Life Sci, Kita Ku, 1-1-1 Tsushima Naka, Okayama 7008530, Japan. ; kenkato@cc.okayama-u.ac.jp |
| 2013-06-01 | |
| 发表期刊 | BREEDING SCIENCE
 |
| ISSN | 1344-7610 |
| 卷号 | 63期号:2页码:183-196 |
| 摘要 | Molecular analysis encouraged discovery of genetic diversity and relationships of cultivated melon (Cucumis melo L.). We sequenced nine inter- and intra-genic regions of the chloroplast genome, about 5500 bp, using 60 melon accessions and six reference accessions of wild species of Cucumis to show intra-specific variation of the chloroplast genome. Sequence polymorphisms were detected among melon accessions and other Cucumis species, indicating intra-specific diversification of the chloroplast genome. Melon accessions were classified into three subclusters by cytoplasm type and then into 12 subgroups. Geographical origin and seed size also differed between the three subclusters. Subcluster Ia contained small-seed melon from Southern Africa and South and East Asia and subcluster Ib mainly consisted of large-seed melon from northern Africa, Europe and USA. Melon accessions of subcluster Ic were only found in West, Central and Southern Africa. Our results indicated that European melon groups and Asian melon groups diversified independently and shared the same maternal lineage with northern African large-seed melon and Southern African small-seed melon, respectively. Cultivated melon of subcluster Ic may have been domesticated independently in Africa. The presence of 11 cytoplasm types in Africa strongly supported African origin of cultivated melon and indicated the importance of germplasm from Africa. |
| 关键词 | Chloroplast Genome Cucumis Genetic Differentiation Genetic Diversity Maternal Line Melon Polyphyletic Origin |
| 学科领域 | Agronomy ; Plant Sciences |
| 收录类别 | SCI |
| 语种 | 英语 |
| WOS记录号 | WOS:000323402200006 |
| 引用统计 | |
| 文献类型 | 期刊论文 |
| 条目标识符 | http://ir.kib.ac.cn/handle/151853/16847 |
| 专题 | 资源植物与生物技术所级重点实验室 |
| 作者单位 | 1.Hirosaki Univ, Fac Humanities, Hirosaki, Aomori 0368560, Japan 2.Okayama Univ, Grad Sch Environm & Life Sci, Kita Ku, Okayama 7008530, Japan 3.Prefectural Univ Hiroshima, Fac Life & Environm Sci, Shobara, Hiroshima 7270023, Japan 4.Hagihara Farm Co Ltd, Shiki, Nara 6360222, Japan 5.Xinjiang Acad Agr Sci, Hami Melon Res Ctr, Urumqi 830000, Peoples R China 6.Chinese Acad Sci, Kunming Inst Bot, Kunming, Yunnan, Peoples R China 7.Res Inst Humanity & Nat, Kita Ku, Kyoto 6038047, Japan |
| 推荐引用方式 GB/T 7714 | Tanaka, Katsunori,Akashi, Yukari,Fukunaga, Kenji,et al. Diversification and genetic differentiation of cultivated melon inferred from sequence polymorphism in the chloroplast genome[J]. BREEDING SCIENCE,2013,63(2):183-196. |
| APA | Tanaka, Katsunori.,Akashi, Yukari.,Fukunaga, Kenji.,Yamamoto, Tatsuya.,Aierken, Yasheng.,...&Kato, Kenji.(2013).Diversification and genetic differentiation of cultivated melon inferred from sequence polymorphism in the chloroplast genome.BREEDING SCIENCE,63(2),183-196. |
| MLA | Tanaka, Katsunori,et al."Diversification and genetic differentiation of cultivated melon inferred from sequence polymorphism in the chloroplast genome".BREEDING SCIENCE 63.2(2013):183-196. |
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