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De Novo Sequencing and Characterization of the Floral Transcriptome of Dendrocalamus latiflorus (Poaceae: Bambusoideae)
Zhang, Xue-Mei; Zhao, Lei; Larson-Rabin, Zachary; Li, De-Zhu; Guo, Zhen-Hua
Corresponding AuthorZhang, XM (reprint author), Chinese Acad Sci, Kunming Inst Bot, Germplasm Bank Wild Species, Plant Germplasm & Genom Ctr, Kunming, Yunnan, Peoples R China.,guozhenhua@mail.kib.ac.cn
2012-08-14
Source PublicationPLOS ONE
ISSN1932-6203
Volume7Issue:8Pages:e42082
AbstractBackground: Transcriptome sequencing can be used to determine gene sequences and transcript abundance in non-model species, and the advent of next-generation sequencing (NGS) technologies has greatly decreased the cost and time required for this process. Transcriptome data are especially desirable in bamboo species, as certain members constitute an economically and culturally important group of mostly semelparous plants with remarkable flowering features, yet little bamboo genomic research has been performed. Here we present, for the first time, extensive sequence and transcript abundance data for the floral transcriptome of a key bamboo species, Dendrocalamus latiflorus, obtained using the Illumina GAII sequencing platform. Our further goal was to identify patterns of gene expression during bamboo flower development.
KeywordSbp-box Gene Arabidopsis Pollen Transcriptome High-salinity Stresses Genome-wide Analysis Flowering-locus-t Abscisic-acid Dna-binding Expression Profiles Functional-analysis Leaf Senescence
DOI10.1371/journal.pone.0042082
Indexed BySCI
Language英语
WOS Research AreaScience & Technology - Other Topics
WOS SubjectMultidisciplinary Sciences
WOS IDWOS:000307500800008
Citation statistics
Cited Times:70[WOS]   [WOS Record]     [Related Records in WOS]
Document Type期刊论文
Identifierhttp://ir.kib.ac.cn/handle/151853/15688
Collection中国西南野生生物种质资源库
AffiliationChinese Acad Sci, Kunming Inst Bot, Germplasm Bank Wild Species, Plant Germplasm & Genom Ctr, Kunming, Yunnan, Peoples R China
Recommended Citation
GB/T 7714
Zhang, Xue-Mei,Zhao, Lei,Larson-Rabin, Zachary,et al. De Novo Sequencing and Characterization of the Floral Transcriptome of Dendrocalamus latiflorus (Poaceae: Bambusoideae)[J]. PLOS ONE,2012,7(8):e42082.
APA Zhang, Xue-Mei,Zhao, Lei,Larson-Rabin, Zachary,Li, De-Zhu,&Guo, Zhen-Hua.(2012).De Novo Sequencing and Characterization of the Floral Transcriptome of Dendrocalamus latiflorus (Poaceae: Bambusoideae).PLOS ONE,7(8),e42082.
MLA Zhang, Xue-Mei,et al."De Novo Sequencing and Characterization of the Floral Transcriptome of Dendrocalamus latiflorus (Poaceae: Bambusoideae)".PLOS ONE 7.8(2012):e42082.
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