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Evolutionary assembly of the Arctic flora 期刊论文
GLOBAL ECOLOGY AND BIOGEOGRAPHY, 2022, 卷号: 31, 期号: 3, 页码: 396-404
Authors:  Qian,Hong;  Deng,Tao;  Ricklefs,Robert E.
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cold tolerance  community assembly  environmental filtering  flowering plants  niche conservatism  phylogenetic structure  SPECIES RICHNESS  DIVERSITY  ECOLOGY  ORIGIN  DIVERSIFICATION  CONSERVATISM  BIOGEOGRAPHY  PATTERNS  HISTORY  
New Genes Interacted With Recent Whole-Genome Duplicates in the Fast Stem Growth of Bamboos 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2021, 卷号: 38, 期号: 12, 页码: 5752-5768
Authors:  Jin,Guihua;  Ma,Peng-Fei;  Wu,Xiaopei;  Gu,Lianfeng;  Long,Manyuan;  Zhang,Chengjun;  Li,De-Zhu
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fast stem growth  orphan genes  de novo genes  WGD  woody bamboos  evolutionary innovation  EVOLUTIONARY ORIGIN  DROSOPHILA-MELANOGASTER  PHYLOGENETIC ANALYSIS  VERTEBRATE EVOLUTION  RAPID EVOLUTION  HUMAN TISSUE  YOUNG GENES  TRANSCRIPTION  EXPRESSION  HOURGLASS  
Phylogenomic conflict coincides with rapid morphological innovation 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2021, 卷号: 118, 期号: 19, 页码: e2023058118
Authors:  Parins-Fukuchi,Caroline;  Stull,Gregory W.;  Smith,Stephen A.
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phylogenomics  morphological evolution  gene-tree discordance  tempo and mode  molecular evolution  GENE TREE DISCORDANCE  FOSSIL FLOWERS  SEED PLANTS  CARYOPHYLLALES  EVOLUTION  ORIGIN  ANCIENT  ROOT  LIFE  DIVERSIFICATION  
Genome surveying reveals the complete chloroplast genome and nuclear genomic features of the crocin-producing plant Gardenia jasminoides Ellis 期刊论文
GENETIC RESOURCES AND CROP EVOLUTION, 2021, 卷号: 68, 期号: 3, 页码: 1165-1180
Authors:  Wang,Wencai;  Shao,Fengqing;  Deng,Xin;  Liu,Yuanwei;  Chen,Siyun;  Li,Yongquan;  Guo,Wei;  Jiang,Qingbin;  Liang,Hong;  Zhang,Xianzhi
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Gardenia jasminoides  Genome surveying  Chloroplast genome  Nuclear genomic features  Crocin-producing plant  RNA  SEQUENCE  CLEAVAGE  MITOCHONDRIAL  CONSTITUENTS  ORGANIZATION  ANNOTATION  RUBIACEAE  REPEAT  ORIGIN  
Phylogeny and evolution of chloroplast tRNAs in Adoxaceae 期刊论文
ECOLOGY AND EVOLUTION, 2021, 卷号: 11, 期号: 3, 页码: 1294-1309
Authors:  Zhong,Qiu-Yi;  Fu,Xiao-Gang;  Zhang,Ting-Ting;  Zhou,Tong;  Yue,Ming;  Liu,Jian-Ni;  Li,Zhong-Hu
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anticodon  chloroplast tRNA  intron  phylogeny  transition  transversion  NONOPTIMAL CODON USAGE  HORIZONTAL TRANSFER  GENE DUPLICATION  GENOME  MITOCHONDRIAL  ORIGIN  TRANSLATION  SEQUENCES  ACID  DNA  
Natural hybridization among three Rhododendron species (Ericaceae) revealed by morphological and genomic evidence 期刊论文
BMC PLANT BIOLOGY, 2021, 卷号: 21, 期号: 1, 页码: 529
Authors:  Zheng,Wei;  Yan,Li-Jun;  Burgess,Kevin S.;  Luo,Ya-Huang;  Zou,Jia-Yun;  Qin,Han-Tao;  Wang,Ji-Hua;  Gao,Lian-Ming
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ddRAD sequencing  Hybrid zone  Morphological trait  Genetic structure  Natural hybridization  Rhododendron  SAGEBRUSH ARTEMISIA-TRIDENTATA  NARROW HYBRID ZONE  ASYMMETRIC HYBRIDIZATION  REPRODUCTIVE ISOLATION  AQUILEGIA-FORMOSA  PINUS-DENSATA  MOUNT-ETNA  SPECIATION  ORIGIN  ADAPTATION  
Adaptive innovation of green plants by horizontal gene transfer 期刊论文
BIOTECHNOLOGY ADVANCES, 2021, 卷号: 46, 页码: 107671
Authors:  Chen,Rujia;  Huangfu,Liexiang;  Lu,Yue;  Fang,Huimin;  Xu,Yang;  Li,Pengcheng;  Zhou,Yong;  Xu,Chenwu;  Huang,Jinling;  Yang,Zefeng
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Plant evolution  adaptation  exaptation  plant-to-plant HGT  crop breeding and improvement  ICE-BINDING PROTEINS  LAND PLANTS  TRANSPOSABLE ELEMENTS  EVOLUTION  GENOME  ORIGIN  DNA  BIOSYNTHESIS  ALGA  RETROTRANSPOSONS  
Genetic innovations: Transposable element recruitment and de novo formation lead to the birth of orphan genes in the rice genome 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 2, 页码: 341-351
Authors:  Jin,Gui-Hua;  Zhou,Yan-Li;  Yang,Hong;  Hu,Yan-Ting;  Shi,Yong;  Li,Ling;  Siddique,Abu N.;  Liu,Chang-Ning;  Zhu,An-Dan;  Zhang,Cheng-Jun;  Li,De-Zhu
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comparative genomics  origin  orphan gene  transposable element  LINEAGE-SPECIFIC GENES  EVOLUTION  ORIGIN  IDENTIFICATION  EMERGENCE  PROTEIN  DUPLICATION  ALIGNMENT  SETS  
Leafless epiphytic orchids share Ceratobasidiaceae mycorrhizal fungi 期刊论文
MYCORRHIZA, 2021, 卷号: 31, 期号: 5, 页码: 625-635
Authors:  Qin,Jiao;  Zhang,Wei;  Feng,Jing-Qiu;  Zhang,Shi-Bao
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Aeridinae  Chiloschista  Mycorrhizal fungal specificity  Leafless epiphytic orchid  Phalaenopsis  Taeniophyllum  MOLECULAR-IDENTIFICATION  SPECIFICITY  DIVERSITY  EVOLUTION  SEQUENCES  ROOTS  GERMINATION  ORIGIN  PLANT  
From the Wild to the Cup: Tracking Footprints of the Tea Species in Time and Space 期刊论文
FRONTIERS IN NUTRITION, 2021, 卷号: 8, 页码: 706770
Authors:  Wambulwa,Moses C.;  Meegahakumbura,Muditha K.;  Kamunya,Samson;  Wachira,Francis N.
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tea  Camellia sinensis  footprints of tea  wild tea  origin of tea  tea domestication  expansion history  AMPLIFIED POLYMORPHIC DNA  CAMELLIA-SINENSIS  GENETIC DIVERSITY  CLIMATE  RELATIVES  DIFFERENTIATION  DOMESTICATION  INSIGHTS  HIMALAYA  ORIGIN