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Horizontally acquired fungal killer protein genes affect cell development in mosses 期刊论文
PLANT JOURNAL, 2023
Authors:  Guan,Yanlong;  Ma,Lan;  Wang,Qia;  Zhao,Jinjie;  Wang,Shuanghua;  Wu,Jinsong;  Liu,Yang;  Sun,Hang;  Huang,Jinling
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horizontal gene transfer  Physcomitrium patens  killer protein 4  plant evolution  cytoplasmic calcium  cell death  PHYSCOMITRELLA-PATENS  CALCIUM-CHANNELS  USTILAGO-MAYDIS  PLANT  LAND  GROWTH  TOXIN  APOPTOSIS  INSIGHTS  GENOMES  
Habitat-related plastome evolution in the mycoheterotrophic Neottia listeroides complex (Orchidaceae, Neottieae) 期刊论文
BMC PLANT BIOLOGY, 2023, 卷号: 23, 期号: 1, 页码: 282
Authors:  Shao,Bing-Yi;  Wang,Mo-Zhu;  Chen,Si-Si;  Ya,Ji-Dong;  Jin,Xiao-Hua
Adobe PDF(3432Kb)  |  Favorite  |  View/Download：103/23  |  Submit date：2024/05/09
Mycoheterotrophy  Neottia listeroides complex  Chloroplast genomes  Micro-evolution  MULTIPLE SEQUENCE ALIGNMENT  SYMBIOTIC GERMINATION  PHYLOGENETIC ANALYSIS  SPECIES ORCHIDACEAE  EPIDENDROIDEAE  GENOME  GASTRODIEAE  REDUCTION  PLANTS  PHOTOSYNTHESIS  
Testing complete plastomes and nuclear ribosomal DNA sequences for species identification in a taxonomically difficult bamboo genus Fargesia 期刊论文
PLANT DIVERSITY, 2023, 卷号: 45, 期号: 2, 页码: 147-155
Authors:  Lv,Shi-Yu;  Ye,Xia-Ying;  Li,Zhong-Hu;  Ma,Peng-Fei;  Li,De-Zhu
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Fargesia  Genome-skimming  DNA barcoding  Plastome  Ribosomal DNA  WHOLE CHLOROPLAST GENOMES  RNA-SEQ DATA  ARUNDINARIEAE POACEAE  BAMBUSOIDEAE  TEMPERATE  PLATFORM  
Characterizing conflict and congruence of molecular evolution across organellar genome sequences for phylogenetics in land plants 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1125107
Authors:  Tyszka,Alexa S.;  Bretz,Eric C.;  Robertson,Holly M.;  Woodcock-Girard,Miles D.;  Ramanauskas,Karolis;  Larson,Drew A.;  Stull,Gregory W.;  Walker,Joseph F.
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phylogenetics  plastome  mitochondrial genome  chloroplast genome  phylogenomics  combinability  phylogenetic conflict  MITOCHONDRIAL GENOMES  PENALIZED LIKELIHOOD  NUCLEOTIDE-SEQUENCES  EXTANT GYMNOSPERMS  DYNAMIC EVOLUTION  CHLOROPLAST DNA  SEED PLANTS  GENE  RATES  RECOMBINATION  
Plastome evolution in the East Asian lobelias (Lobelioideae) using phylogenomic and comparative analyses 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1144406
Authors:  Li,Chun-Jiao;  Xie,Xin-Tong;  Liu,Hong-Xin;  Wang,Ruo-Nan;  Li,De-Zhu
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East Asian lobelias  plastomes  phylogenomic framework  highly divergent regions  positive selection  adaptive evolution  INVERTED REPEAT  HIGH-ALTITUDE  CAMPANULACEAE  GENOMES  SELECTION  EXPANSION  SEQUENCE  TOOLS  GENE  DNA  
Five new and noteworthy species of Epidendroideae (Orchidaceae) from southwestern China based on morphological and phylogenetic evidence 期刊论文
PHYTOKEYS, 2023, 期号: 235, 页码: 211-236
Authors:  Ya,Ji-Dong;  Wang,Wan -Ting;  Liu,Yun-Long;  Jiang,Hong;  Han,Zhou-Dong;  Zhang,Ting;  Huang,Hua;  Cai,Jie;  Li,De-Zhu
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Neottia  Gastrochilus  Papilionanthe  Plastid phylogenomics  Taxonomy  Tibet  Yunnan  PLASTID GENOMES  EVOLUTION  VANDEAE  TRIBE  
Comparative analyses of Linderniaceae plastomes, with implications for its phylogeny and evolution 期刊论文
FRONTIERS IN PLANT SCIENCE, 2023, 卷号: 14, 页码: 1265641
Authors:  Yan,Rongrong;  Geng,Yanfei;  Jia,Yuhuan;  Xiang,Chunlei;  Zhou,Xinxin;  Hu,Guoxiong
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Lindernieae  Lindernia  Picria  Torenia  Scrophulariaceae  chloroplast genome  phylogenomics  SEQUENCE  PLACEMENT  SOFTWARE  TORENIA  DNA  DISINTEGRATION  MITOCHONDRIAL  ALIGNMENT  PLATFORM  GENOMES  
Testing and using complete plastomes for authentication of medicinal Polygonatum species (Asparagaceae) 期刊论文
INDUSTRIAL CROPS AND PRODUCTS, 2023, 卷号: 197, 页码: 116557
Authors:  Wang,Shuying;  Zhou,Nian;  Shi,Naixing;  Zhang,Guangfei;  Liu,Haiyang;  Guo,Xiaorong;  Ji,Yunheng
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Adulterant  Genome skimming  Plant barcoding 2  0  Polygonati Rhizoma  Species identification  DNA BARCODE  IQ-TREE  GENOMES  REINSTATEMENT  
Guvermectin Biosynthesis Revealing the Key Role of a Phosphoribohydrolase and Structural Insight into the Active Glutamate of a Noncanonical Adenine Phosphoribosyltransferase 期刊论文
ACS CHEMICAL BIOLOGY, 2023
Authors:  Liu,Chongxi;  Wang,Zhiyan;  Chen,Yin;  Yan,Yijun;  Li,Lei;  Wang,Yong-Jiang;  Bai,Lu;  Li,Shanshan;  Zhang,Yanyan;  Wang,Xiangjing;  Huang,Sheng-Xiong;  Xiang,Wensheng
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CRYSTAL-STRUCTURE  GENOMES  
Comparative analyses of chloroplast genomes from Six Rhodiola species: variable DNA markers identification and phylogenetic relationships within the genus 期刊论文
BMC GENOMICS, 2022, 卷号: 23, 期号: 1, 页码: 577
Authors:  Zhao, Kaihui;  Li, Lianqiang;  Quan, Hong;  Yang, Junbo;  Zhang, Zhirong;  Liao, Zhihua;  Lan, Xiaozhong
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Rhodiola  Chloroplast genome  Divergent hotspots  Phylogenetic analysis  GROUP CLASSIFICATION  FLOWERING PLANTS  PLASTID GENOMES  TRNH-PSBA  SEQUENCE  EVOLUTION  FAMILIES  REPEATS  UPDATE  ORDERS