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High-quality evergreen azalea genome reveals tandem duplication-facilitated low-altitude adaptability and floral scent evolution 期刊论文
PLANT BIOTECHNOLOGY JOURNAL, 2021, 卷号: 19, 期号: 12, 页码: 2544-2560
Authors:  Wang,Xiuyun;  Gao,Yuan;  Wu,Xiaopei;  Wen,Xiaohui;  Li,Danqing;  Zhou,Hong;  Li,Zheng;  Liu,Bing;  Wei,Jianfen;  Chen,Fei;  Chen,Feng;  Zhang,Chengjun;  Zhang,Liangsheng;  Xia,Yiping
Favorite  |  View/Download：25/0  |  Submit date：2022/04/02
Azalea  Rhododendron ovatum  altitude  adaptability  floral scent  terpene synthase (TPS)  tandem duplication  defence response  PHYLOGENETIC ANALYSIS  TERPENE SYNTHASES  PLANT VOLATILES  SALICYLIC-ACID  JASMONIC ACID  WHOLE-GENOME  GENE  DIVERSITY  TOOL  TRANSCRIPTOME  
Nuclear phylotranscriptomics and phylogenomics support numerous polyploidization events and hypotheses for the evolution of rhizobial nitrogen-fixing symbiosis in Fabaceae 期刊论文
MOLECULAR PLANT, 2021, 卷号: 14, 期号: 5, 页码: 748-773
Authors:  Zhao,Yiyong;  Zhang,Rong;  Jiang,Kai-Wen;  Qi,Ji;  Hu,Yi;  Guo,Jing;  Zhu,Renbin;  Zhang,Taikui;  Egan,Ashley N.;  Yi,Ting-Shuang;  Huang,Chien-Hsun;  Ma,Hong
Favorite  |  View/Download：26/0  |  Submit date：2022/04/02
Fabaceae  Leguminosae  nuclear phylogeny  divergence times  whole-genome duplication  rhizobial nodulation  COMPARATIVE GENOMICS  PHYLOGENETIC PERSPECTIVES  EARLY DIVERSIFICATION  PENALIZED LIKELIHOOD  ANCESTRAL POLYPLOIDY  MOLECULAR EVOLUTION  LOTUS-JAPONICUS  ANALYSES REVEAL  GENE  LEGUMINOSAE  
Expansion and expression diversity of FAR1/FRS-like genes provides insights into flowering time regulation in roses 期刊论文
PLANT DIVERSITY, 2021, 卷号: 43, 期号: 2, 页码: 173-179
Authors:  Zhong,Mi-Cai;  Jiang,Xiao-Dong;  Cui,Wei-Hua;  Hu,Jin-Yong
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Rose  FAR1/FRS-Like genes  Gene family expansion  Flowering time  Shoot growth behavior  RED ELONGATED HYPOCOTYL3  TRANSCRIPTION FACTORS  ARABIDOPSIS FHY3  LIGHT  RESPONSES  BIOSYNTHESIS  DUPLICATION  PHYTOCHROME  EVOLUTION  ROKSN  
Phylogeny and evolution of chloroplast tRNAs in Adoxaceae 期刊论文
ECOLOGY AND EVOLUTION, 2021, 卷号: 11, 期号: 3, 页码: 1294-1309
Authors:  Zhong,Qiu-Yi;  Fu,Xiao-Gang;  Zhang,Ting-Ting;  Zhou,Tong;  Yue,Ming;  Liu,Jian-Ni;  Li,Zhong-Hu
Adobe PDF(2392Kb)  |  Favorite  |  View/Download：15/0  |  Submit date：2022/04/02
anticodon  chloroplast tRNA  intron  phylogeny  transition  transversion  NONOPTIMAL CODON USAGE  HORIZONTAL TRANSFER  GENE DUPLICATION  GENOME  MITOCHONDRIAL  ORIGIN  TRANSLATION  SEQUENCES  ACID  DNA  
Genetic innovations: Transposable element recruitment and de novo formation lead to the birth of orphan genes in the rice genome 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2021, 卷号: 59, 期号: 2, 页码: 341-351
Authors:  Jin,Gui-Hua;  Zhou,Yan-Li;  Yang,Hong;  Hu,Yan-Ting;  Shi,Yong;  Li,Ling;  Siddique,Abu N.;  Liu,Chang-Ning;  Zhu,An-Dan;  Zhang,Cheng-Jun;  Li,De-Zhu
Favorite  |  View/Download：29/0  |  Submit date：2022/04/02
comparative genomics  origin  orphan gene  transposable element  LINEAGE-SPECIFIC GENES  EVOLUTION  ORIGIN  IDENTIFICATION  EMERGENCE  PROTEIN  DUPLICATION  ALIGNMENT  SETS  
The Chromosome-Based Rubber Tree Genome Provides New Insights into Spurge Genome Evolution and Rubber Biosynthesis 期刊论文
MOLECULAR PLANT, 2020, 卷号: 13, 期号: 2, 页码: 336-350
Authors:  Liu, Jin;  Shi, Cong;  Shi, Cheng-Cheng;  Li, Wei;  Zhang, Qun-Jie;  Zhang, Yun;  Li, Kui;  Lu, Hui-Fang;  Shi, Chao;  Zhu, Si-Tao;  Xiao, Zai-Yun;  Nan, Hong;  Yue, Yao;  Zhu, Xun-Ge;  Wu, Yu;  Hong, Xiao-Ning;  Fan, Guang-Yi;  Tong, Yan;  Zhang, Dan;  Mao, Chang-Li;  Liu, Yun-Long;  Hao, Shi-Jie;  Liu, Wei-Qing;  Lv, Mei-Qi;  Zhang, Hai-Bin;  Liu, Yuan;  Hu-tang, Ge-Ran;  Wang, Jin-Peng;  Wang, Jia-Hao;  Sun, Ying-Huai;  Ni, Shu-Bang;  Chen, Wen-Bin;  Zhang, Xing-Cai;  Jiao, Yuan-Nian;  Eichler, Evan E.;  Li, Guo-Hua;  Liu, Xin;  Gao, Li-Zhi
Favorite  |  View/Download：84/0  |  Submit date：2020/03/24
rubber tree  rubber biosynthesis  chromosome evolution  whole-genome duplication  domestication  
Genome-Wide Analysis of WRKY Genes and Their Response to Hormone and Mechanic Stresses in Carrot 期刊论文
FRONTIERS IN GENETICS, 2019, 卷号: 10, 页码: 19
Authors:  Nan, Hong;  Gao, Li-Zhi
Adobe PDF(4984Kb)  |  Favorite  |  View/Download：78/13  |  Submit date：2019/06/24
WRKY transcription factor  carrot  whole genome duplication  expression divergence  hormone and mechanic stresses  
Evolution of Rosaceae Fruit Types Based on Nuclear Phylogeny in the Context of Geological Times and Genome Duplication 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2017, 卷号: 34, 期号: 2, 页码: 262-281
Authors:  Xiang,Yezi;  Huang,Chien-Hsun;  Hu,Yi;  Wen,Jun;  Li,Shisheng;  Yi,Tingshuang;  Chen,Hongyi;  Xiang,Jun;  Ma,Hong
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Northeastern Washington-state  Sequence Data  Molecular Phylogenetics  British-columbia  Divergence Times  Prunus Rosaceae  Ribosomal Dna  Early Eocene  Gene Data  Polyploidy  Coalescence  Fruit Evolution  Molecular Clock  Nuclear Phylogeny  Rosaceae  Genome Duplication  
The impacts of polyploidy, geographic and ecological isolations on the diversification of Panax (Araliaceae) 期刊论文
BMC PLANT BIOLOGY, 2015, 卷号: 15
Authors:  Shi, Feng-Xue;  Li, Ming-Rui;  Li, Ya-Ling;  Jiang, Peng;  Zhang, Cui;  Pan, Yue-Zhi;  Liu, Bao;  Xiao, Hong-Xing;  Li, Lin-Feng
Adobe PDF(4172Kb)  |  Favorite  |  View/Download：404/34  |  Submit date：2016/02/01
Chloroplast  Disjunt Distribution  Nrits  Nucleotide Diversity  Panax  Single Copy Nuclear Gene  Whole Genome Duplication  
The expression and phylogenetic analysis of four AP3-like paralogs in the stamens, carpels, and single-whorl perianth of the paleoherb Asarum caudigerum 期刊论文
MOLECULAR BIOLOGY REPORTS, 2013, 卷号: 40, 期号: 8, 页码: 4691-4699
Authors:  Zhao, Yin-He;  Larson-Rabin, Zachary;  Li, De-Zhu;  Wang, Guo-Ying;  Peng, Seng;  Li, Cheng-Yun
Adobe PDF(791Kb)  |  Favorite  |  View/Download：331/81  |  Submit date：2013/10/16
Asarum Caudigerum  Ap3-like  Gene Duplication  Pseudogene  Neofunctionalization  Subfunctionalization