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Rapid Genome Evolution and Adaptation of Thlaspi arvense Mediated by Recurrent RNA-Based and Tandem Gene Duplications 期刊论文
FRONTIERS IN PLANT SCIENCE, 2022, 卷号: 12, 页码: 772655
作者:  Hu, Yanting;  Wu, Xiaopei;  Jin, Guihua;  Peng, Junchu;  Leng, Rong;  Li, Ling;  Gui, Daping;  Fan, Chuanzhu;  Zhang, Chengjun
浏览  |  Adobe PDF(3413Kb)  |  收藏  |  浏览/下载：20/5  |  提交时间：2024/03/11
High-quality evergreen azalea genome reveals tandem duplication-facilitated low-altitude adaptability and floral scent evolution 期刊论文
PLANT BIOTECHNOLOGY JOURNAL, 2021, 卷号: 19, 期号: 12, 页码: 2544-2560
作者:  Wang,Xiuyun;  Gao,Yuan;  Wu,Xiaopei;  Wen,Xiaohui;  Li,Danqing;  Zhou,Hong;  Li,Zheng;  Liu,Bing;  Wei,Jianfen;  Chen,Fei;  Chen,Feng;  Zhang,Chengjun;  Zhang,Liangsheng;  Xia,Yiping
收藏  |  浏览/下载：46/0  |  提交时间：2022/04/02
Azalea  Rhododendron ovatum  altitude  adaptability  floral scent  terpene synthase (TPS)  tandem duplication  defence response  PHYLOGENETIC ANALYSIS  TERPENE SYNTHASES  PLANT VOLATILES  SALICYLIC-ACID  JASMONIC ACID  WHOLE-GENOME  GENE  DIVERSITY  TOOL  TRANSCRIPTOME  
New Genes Interacted With Recent Whole-Genome Duplicates in the Fast Stem Growth of Bamboos 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2021, 卷号: 38, 期号: 12, 页码: 5752-5768
作者:  Jin,Guihua;  Ma,Peng-Fei;  Wu,Xiaopei;  Gu,Lianfeng;  Long,Manyuan;  Zhang,Chengjun;  Li,De-Zhu
收藏  |  浏览/下载：56/0  |  提交时间：2022/04/02
fast stem growth  orphan genes  de novo genes  WGD  woody bamboos  evolutionary innovation  EVOLUTIONARY ORIGIN  DROSOPHILA-MELANOGASTER  PHYLOGENETIC ANALYSIS  VERTEBRATE EVOLUTION  RAPID EVOLUTION  HUMAN TISSUE  YOUNG GENES  TRANSCRIPTION  EXPRESSION  HOURGLASS  
The Rhododendron Plant Genome Database (RPGD): a comprehensive online omics database for Rhododendron 期刊论文
BMC GENOMICS, 2021, 卷号: 22, 期号: 1, 页码: 376
作者:  Liu,Ningyawen;  Zhang,Lu;  Zhou,Yanli;  Tu,Mengling;  Wu,Zhenzhen;  Gui,Daping;  Ma,Yongpeng;  Wang,Jihua;  Zhang,Chengjun
收藏  |  浏览/下载：55/0  |  提交时间：2022/04/02
Rhododendron  Horticulture plant  Database  Functional genomics  COMPLETE CHLOROPLAST GENOME  ERICACEAE  YUNNAN  DNA  
The new chimeric chiron genes evolved essential roles in zebrafish embryonic development by regulating NAD(+) levels 期刊论文
SCIENCE CHINA-LIFE SCIENCES, 2021, 卷号: 64, 期号: 11, 页码: 1929-1948
作者:  Fang,Chengchi;  Gan,Xiaoni;  Zhang,Chengjun;  He,Shunping
收藏  |  浏览/下载：29/0  |  提交时间：2022/04/02
new chimeric genes  essential function  NAD plus rate-limiting enzyme  coevolution  COLONY-ENHANCING FACTOR  DE-NOVO ORIGINATION  PHYLOGENETIC ANALYSIS  PROTEIN DIVERSITY  RAPID EVOLUTION  DUPLICATE GENES  GENERATION TIME  PATHWAY  YOUNG  NEOFUNCTIONALIZATION  
Divergence and hybridization in the desert plant Reaumuria soongarica 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2020
作者:  Shi, Yong;  Yan, Xia;  Yin, Heng-Xia;  Qian, Chao-Ju;  Fan, Xing-Ke;  Yin, Xiao-Yue;  Chang, Yu-Xiao;  Zhang, Cheng-Jun;  Ma, Xiao-Fei
浏览  |  Adobe PDF(2422Kb)  |  收藏  |  浏览/下载：110/40  |  提交时间：2021/01/05
Genetic innovations: Transposable element recruitment and de novo formation lead to the birth of orphan genes in the rice genome 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 页码: 11
作者:  Jin, Gui-Hua;  Zhou, Yan-Li;  Yang, Hong;  Hu, Yan-Ting;  Shi, Yong;  Li, Ling;  Siddique, Abu N.;  Liu, Chang-Ning;  Zhu, An-Dan;  Zhang, Cheng-Jun;  Li, De-Zhu
浏览  |  Adobe PDF(845Kb)  |  收藏  |  浏览/下载：253/107  |  提交时间：2020/03/17
comparative genomics  origin  orphan gene  transposable element  
Evolutionary patterns of chimeric retrogenes in Oryza species 期刊论文
SCIENTIFIC REPORTS, 2019, 卷号: 9, 页码: 12
作者:  Zhou, Yanli;  Zhang, Chengjun
浏览  |  Adobe PDF(2334Kb)  |  收藏  |  浏览/下载：153/50  |  提交时间：2020/03/02
Alternative splicing coupled to nonsense-mediated mRNA decay contributes to the high-altitude adaptation of maca (Lepidium meyenii) 期刊论文
GENE, 2019, 卷号: 694, 页码: 7-18
作者:  Shi, Yong;  Su, Zechun;  Yang, Hong;  Wang, Wenzhi;  Jin, Guihua;  He, Guiqing;  Siddique, Abu Nasar;  Zhang, Liangsheng;  Zhu, Andan;  Xue, Runguang;  Zhang, Chengjun
浏览  |  Adobe PDF(1643Kb)  |  收藏  |  浏览/下载：230/29  |  提交时间：2019/07/29
Alpine plants  Post-transcriptome  Intron retention  Alternative 3 ' splice site  Long non-coding RNA  Positive selection  
Rapid evolution of protein diversity by de novo origination in Oryza 期刊论文
NATURE ECOLOGY & EVOLUTION, 2019, 卷号: 3, 期号: 4, 页码: 679-690
作者:  Zhang, Li;  Ren, Yan;  Yang, Tao;  Li, Guangwei;  Chen, Jianhai;  Gschwend, Andrea R.;  Yu, Yeisoo;  Hou, Guixue;  Zi, Jin;  Zhou, Ruo;  Wen, Bo;  Zhang, Jianwei;  Chougule, Kapeel;  Wang, Muhua;  Copetti, Dario;  Peng, Zhiyu;  Zhang, Chengjun;  Zhang, Yong;  Ouyang, Yidan;  Wing, Rod A.;  Liu, Siqi;  Long, Manyuan
浏览  |  Adobe PDF(1636Kb)  |  收藏  |  浏览/下载：205/45  |  提交时间：2019/07/29