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Plastid NDH Pseudogenization and Gene Loss in a Recently Derived Lineage from the Largest Hemiparasitic Plant Genus Pedicularis (Orobanchaceae ) 期刊论文
PLANT AND CELL PHYSIOLOGY, 2021, 卷号: 62, 期号: 6, 页码: 971-984
作者:  Li,Xin;  Yang,Jun-Bo;  Wang,Hong;  Song,Yu;  Corlett,Richard T.;  Yao,Xin;  Li,De-Zhu;  Yu,Wen-Bin
浏览  |  Adobe PDF(1695Kb)  |  收藏  |  浏览/下载：73/32  |  提交时间：2022/04/02
Hemiparasite  IR expansion  NA(D)H dehydrogenase-like complex  Orobanchaceae  Pseudogenization  Relaxation of selection  ACETYL-COA CARBOXYLASE  INVERTED REPEAT  LIFE-STYLE  ACCD GENE  EVOLUTION  GENOME  DIVERSITY  PHYLOGENY  SELECTION  INSIGHTS  
Complementary Transcriptome and Proteome Analyses Provide Insight into the Floral Transition in Bamboo (Dendrocalamus latiflorus Munro) 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2020
作者:  Wang, Xiaoyan;  Wang, Yujiao;  Yang, Guoqian;  Zhao, Lei;  Zhang, Xuemei;  Li, Dezhu;  Guo, Zhenhua
浏览  |  Adobe PDF(3283Kb)  |  收藏  |  浏览/下载：103/28  |  提交时间：2021/01/05
Comparative analysis of plastid genomes within the Campanulaceae and phylogenetic implications 期刊论文
PLOS ONE, 2020
作者:  Li, Chun-Jiao;  Wang, Ruo-Nan;  Li, De-Zhu
浏览  |  Adobe PDF(2725Kb)  |  收藏  |  浏览/下载：76/31  |  提交时间：2021/01/05
Genomic analysis reveals rich genetic variation and potential targets of selection during domestication of castor bean from perennial woody tree to annual semi-woody crop 期刊论文
PLANT DIRECT, 2019, 卷号: 3, 期号: 10, 页码: 16
作者:  Xu, Wei;  Yang, Tianquan;  Qiu, Lijun;  Chapman, Mark A.;  Li, De-Zhu;  Liu, Aizhong
浏览  |  Adobe PDF(4201Kb)  |  收藏  |  浏览/下载：133/18  |  提交时间：2020/03/24
castor bean  domestication selection  genetic variation  seed storage lipids  woody tree  
Plastid phylogenomic insights into the evolution of Caryophyllales 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 134, 页码: 74-86
作者:  Yao, Gang;  Jin, Jian-Jun;  Li, Hong-Tao;  Yang, Jun-Bo;  Mandala, Venkata Shiva;  Croley, Matthew;  Mostow, Rebecca;  Douglas, Norman A.;  Chase, Mark W.;  Christenhusz, Maarten J. M.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Smith, Stephen A.;  Brockington, Samuel F.;  Moore, Michael J.;  Yi, Ting-Shuang;  Li, De-Zhu
浏览  |  Adobe PDF(4374Kb)  |  收藏  |  浏览/下载：228/27  |  提交时间：2019/04/15
Caryophyllales  Gene loss  Molecular dating  Phylogenomics  Plastome  Rapid radiation  Substitution rate  
Comparative analyses of plastid genomes from fourteen Cornales species: inferences for phylogenetic relationships and genome evolution 期刊论文
BMC GENOMICS, 2017, 卷号: 18, 页码: 956
作者:  Fu, Chao-Nan;  Li, Hong-Tao;  Milne, Richard;  Zhang, Ting;  Ma, Peng-Fei;  Yang, Jing;  Li, De-Zhu;  Gao, Lian-Ming
浏览  |  Adobe PDF(3094Kb)  |  收藏  |  浏览/下载：459/25  |  提交时间：2018/05/08
Plastid Genome  Phylogenomics  Cornales  Alignment  Partitioning Schemes  Gene Loss  
Comparative chloroplast genomes of eleven Schima (Theaceae) species: Insights into DNA barcoding and phylogeny 期刊论文
PLoS ONE, 2017, 卷号: 12, 期号: 6, 页码: e0178026
作者:  Yu, Xiang-Qin;  Drew, Bryan T.;  Yang, Jun-Bo;  Gao, Lian-Ming;  Li, De-Zhu
浏览  |  Adobe PDF(3146Kb)  |  收藏  |  浏览/下载：320/8  |  提交时间：2017/07/18
Plastomes of Mimosoideae: structural and size variation, sequence divergence, and phylogenetic implication 期刊论文
TREE GENETICS & GENOMES, 2017, 卷号: 13, 期号: 2, 页码: 41
作者:  Wang, Yin-Huan;  Qu, Xiao-Jian;  Chen, Si-Yun;  Li, De-Zhu;  Yi, Ting-Shuang
浏览  |  Adobe PDF(5516Kb)  |  收藏  |  浏览/下载：197/31  |  提交时间：2017/07/10
Plastome  Ir Expansion/contraction  Repeats  Mimosoideae  Sequence Divergence  Phylogenomics  
Multiple measures could alleviate long-branch attraction in phylogenomic reconstruction of Cupressoideae (Cupressaceae) 期刊论文
SCIENTIFIC REPORTS, 2017, 卷号: 7
作者:  Qu, Xiao-Jian;  Jin, Jian-Jun;  Chaw, Shu-Miaw;  Li, De-Zhu;  Yi, Ting-Shuang
Adobe PDF(1287Kb)  |  收藏  |  浏览/下载：183/55  |  提交时间：2017/04/18
Lineage-Specific Reductions of Plastid Genomes in an Orchid Tribe with Partially and Fully Mycoheterotrophic Species 期刊论文
GENOME BIOLOGY AND EVOLUTION, 2016, 卷号: 8, 期号: 7, 页码: 2164-2175
作者:  Feng, Yan-Lei;  Wicke, Susann;  Li, Jian-Wu;  Han, Yu;  Lin, Choun-Sea;  Li, De-Zhu;  Zhou, Ting-Ting;  Huang, Wei-Chang;  Huang, Lu-Qi;  Jin, Xiao-Hua
浏览  |  Adobe PDF(1102Kb)  |  收藏  |  浏览/下载：140/41  |  提交时间：2016/11/04
Heterotrophy  Plastid Genome Reduction  Neottieae  Orchidaceae  Relaxed Selection