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Plastome Reduction in the Only Parasitic Gymnosperm Parasitaxus Is Due to Losses of Photosynthesis but Not Housekeeping Genes and Apparently Involves the Secondary Gain of a Large Inverted Repeat 期刊论文
GENOME BIOLOGY AND EVOLUTION, 2019, 卷号: 11, 期号: 10, 页码: 2789-2796
Authors:  Qu, Xiao-Jian;  Fan, Shou-Jin;  Wicke, Susann;  Yi, Ting-Shuang
View  |  Adobe PDF(1214Kb)  |  Favorite  |  View/Download:10/3  |  Submit date:2020/03/18
plastome  parasitism  mycoheterotrophy  gene loss  Parasitaxus  
Testing and using complete plastomes and ribosomal DNA sequences as the next generation DNA barcodes in Panax (Araliaceae) 期刊论文
MOLECULAR ECOLOGY RESOURCES, 2019, 页码: 13
Authors:  Ji, Yunheng;  Liu, Changkun;  Yang, Zhenyan;  Yang, Lifang;  He, Zhengshan;  Wang, Hengchang;  Yang, Junbo;  Yi, Tingshuang
View  |  Adobe PDF(836Kb)  |  Favorite  |  View/Download:97/15  |  Submit date:2019/09/10
next-generation DNA barcodes  Panax  plastome  ribosomal DNA  species discrimination  standard DNA barcodes  
The plastid genome of Pentadiplandra brazzeana Baillon (Pentadiplandraceae) 期刊论文
MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 卷号: 4, 期号: 2, 页码: 4002-4003
Authors:  Zheng, Xu;  Yi, Ting-Shuang
View  |  Adobe PDF(782Kb)  |  Favorite  |  View/Download:7/1  |  Submit date:2020/03/26
Pentadiplandra brazzeana  Pentadiplandraceae  Brassicales  plastome  phylogenomics  brazzein  
The complete plastome of Ctenolophon englerianus Mildbr. (Ctenolophonaceae) 期刊论文
MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 卷号: 4, 期号: 2, 页码: 3379-3380
Authors:  Wang, Zi-Xun;  Jin, Dong-Min;  Wang, Guo-Dong;  Yi, Ting-Shuang
View  |  Adobe PDF(863Kb)  |  Favorite  |  View/Download:67/0  |  Submit date:2019/12/20
Ctenolophon englerianus  Ctenolophonaceae  plastome  phylogenomics  
PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes 期刊论文
PLANT METHODS, 2019, 卷号: 15, 页码: 12
Authors:  Qu, Xiao-Jian;  Moore, Michael J.;  Li, De-Zhu;  Yi, Ting-Shuang
View  |  Adobe PDF(1302Kb)  |  Favorite  |  View/Download:24/0  |  Submit date:2019/07/29
PGA  Plastome  Batch annotation  Accuracy  BLAST  Software  Algorithms  
Origin of angiosperms and the puzzle of the Jurassic gap 期刊论文
NATURE PLANTS, 2019, 卷号: 5, 期号: 5, 页码: 461-470
Authors:  Li, Hong-Tao;  Yi, Ting-Shuang;  Gao, Lian-Ming;  Ma, Peng-Fei;  Zhang, Ting;  Yang, Jun-Bo;  Gitzendanner, Matthew A.;  Fritsch, Peter W.;  Cai, Jie;  Luo, Yang;  Wang, Hong;  van der Bank, Michelle;  Zhang, Shu-Dong;  Wang, Qing-Feng;  Wang, Jian;  Zhang, Zhi-Rong;  Fu, Chao-Nan;  Yang, Jing;  Hollingsworth, Peter M.;  Chase, Mark W.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Li, De-Zhu
View  |  Adobe PDF(1707Kb)  |  Favorite  |  View/Download:80/4  |  Submit date:2019/07/29
Plastid phylogenomic insights into the evolution of Caryophyllales 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 134, 页码: 74-86
Authors:  Yao, Gang;  Jin, Jian-Jun;  Li, Hong-Tao;  Yang, Jun-Bo;  Mandala, Venkata Shiva;  Croley, Matthew;  Mostow, Rebecca;  Douglas, Norman A.;  Chase, Mark W.;  Christenhusz, Maarten J. M.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Smith, Stephen A.;  Brockington, Samuel F.;  Moore, Michael J.;  Yi, Ting-Shuang;  Li, De-Zhu
View  |  Adobe PDF(4374Kb)  |  Favorite  |  View/Download:105/1  |  Submit date:2019/04/15
Caryophyllales  Gene loss  Molecular dating  Phylogenomics  Plastome  Rapid radiation  Substitution rate  
Assembly and comparative analyses of the mitochondrial genome of Castanospermum australe (Papilionoideae, Leguminosae) 期刊论文
AUSTRALIAN SYSTEMATIC BOTANY, 2019, 卷号: 32, 期号: 5-6, 页码: 484-494
Authors:  Zhang, Rong;  Jin, Jian-Jun;  Moore, Michael J.;  Yi, Ting-Shuang
View  |  Adobe PDF(2840Kb)  |  Favorite  |  View/Download:3/1  |  Submit date:2020/03/26
genome skimming  legume  mitochondrion  Moreton Bay chestnut  phylogeny  read-pair mapping  
The plastid genome of Klainedoxa gabonensis Pierre ex Engl. (Malpighiales) 期刊论文
MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 卷号: 4, 期号: 2, 页码: 2541-2542
Authors:  Jin, Dong-Min;  Gan, Lu;  Jin, Jian-Jun;  Yi, Ting-Shuang
View  |  Adobe PDF(777Kb)  |  Favorite  |  View/Download:12/1  |  Submit date:2020/03/02
Klainedoxa gabonensis  Malpighiales  plastome  tropical trees  phylogenomics  
Characterization of the complete chloroplast genome of Dalbergia odorifera (Leguminosae), a rare and critically endangered legume endemic to China 期刊论文
CONSERVATION GENETICS RESOURCES, 2018, 卷号: 10, 期号: 3, 页码: 527-530
Authors:  Wariss, Hafiz Muhammad;  Yi, Ting-Shuang;  Wang, Hong;  Zhang, Rong
View  |  Adobe PDF(1542Kb)  |  Favorite  |  View/Download:124/27  |  Submit date:2018/09/17
Dalbergia Odorifera  Endangered Species  Plastome  Phylogenetic Analysis