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中国科学院昆明植物研究所知识管理系统
Knowledge Management System of Kunming Institute of Botany,CAS
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GST,p < 0.001) and low levels of seed-based gene flow. C. debaoensis (Cycadaceae) is an endangered species restricted to the border of Guangxi and Yunnan province in southwest China. This species has been classified into two types: sand and karst, according to the soil matrix they grow on. We examined chloroplast sequence variation of the cpDNA sequences from 11 populations of this species. Significant population genetic differentiation was detected (GST= 0.684 and FST = 0.74160). There was marked genetic differentiation between populations in the sand and karst regions and no expansion was detected. Climate changes during glacial periods have had significant effects on the current distribution of cycads. The molecular phylogenetic data, together with the geographic distribution of the haplotypes, suggest that C. debaoensis experienced range contraction during glacial periods, and that the current populations are still confined to the original refugia in southwest China which have favorable habitats in glacial period. These results imply that small refugia were maintained in both sand and karst regions during the LGM (last glacial maximum). This species had no postglacial recolonization and only stayed in these refugia up to now. The low within-population diversity of C. debaoensis suggests that there were strong bottleneck events or founder effects within each separate region during the Quaternary climatic oscillations. Relatively high genetic and haplotype diversities were detected in the newly discovered populations, which located at intermediate locality of sand regions and had morphological variation; this is probably the consequence of the admixture of different haplotypes colonizing the area from separate sources. C. micholitzii occurs in the Annan Highlands in central Vietnam near the Laos border. C. bifida occurs in North Vietnam; its distribution extends across the border into adjacent localities in Guangxi and Yunnan in China. For the comparability between them,theywere considered as the same species C. micholitzii by many academicians. The cpDNA sequences from 11 populations showed that these very controversial species, C. micholitzii and C. bifida, is paraphyletic and should belong to the same species C. micholitzii. AMOVA analysis showed that the component of among-population within region/species (76.46%) was unexpectedly larger than the among-species/region component (14.97%), which also indicates that there is no justification for recognizing two species as C. micholitzii and C. bifida. This hypothesis was also supported by the geological data, especially the neotectonic history of the indo-china block, which started to move south since Oligocene and cause the geographic isolation of these two groups. Therefore, the most likely explanation to the phenotypic similarities between these two groups may be the retention of ancestral polymorphisms in the paraphyletic group due to incomplete lineage sorting. Furthermore, the similarities may also be ascribed to pollen-mediated gene flow among geographically proximate populations and/or phenotypic convergence under similar selection schemes in the same region. C.micholitzi had the higest genetic diversity (HT = 0.980,) and genetic differentiation (GST = 0.830, NST = 0.915) among the C. micholitzii complex. The high genetic diversity might be attributed to its long evolutionary history, highly diverse habitats. The ineffective mode of seed dispersal and dramatic neotectonic movement in the distribution range of this species could result in the high genetic differentiation. 2. Phylogeographic analysis based on nuclear ribosomal sequences, We sequenced the nrDNA ITS in all 27 populations sampled, 7 haplotypes were identified, among which C. micholitzii had 6, while C. multipinnata, C. longipetiolula and C. debaoensis shared the remaining one. Compared to chloroplast genes, nuclear genes had higher correlation between genetic and geographical distance, but lower interspecies differentiation (54.42% vs 25.24%). Phylogeographical structure of C. micholitzii and C.bifida based on ITS Variation was consistent with the morphology differentiation. This similar in nuclear gene should be ascribed to pollen-mediated gene flow among geographically proximate populations.Long-distance gene flow over the two groups was clearly interrupted, which brought on the nrDNA genetic differenciation between the geographically isolated groups, to a certain extent affected the morphological variation. 3. Interspecies relationships among Cycas micholitzii complex, We analysed chloroplast sequence variation of the atpB-rbcL and psbA-trnH intergenic spacers in 27 populations sampled of C. micholitzii complex, AMOVA analysis showed that the component of among-species/region component (59.21%). However, phylogenic analysis showed that the haplotypes of C. micholitzii complex couldn`t grouped into four clusters closely corresponding to the narrowly defined C. micholitzi, C. multipinnata, C. debaoensis and C. longipetiolula. We concluded that the conflict may result from several factors: firstly incomplete lineage sorting of C. micholitzii; secondly hybridization/introgression of sympatrically cycads, which would be supported by evidence base on nrDNA ITS sequences; thirdly intramolecular recombination in cpDNA of cycads; eventually the neotectonic movement in the distribution range of this 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Appressorial interactions with host and their evolution
期刊论文
FUNGAL DIVERSITY, 2021, 卷号: 110, 期号: 1, 页码: 75-107
作者:
Chethana,K. W. Thilini
;
Jayawardena,Ruvishika S.
;
Chen,Yi-Jyun
;
Konta,Sirinapa
;
Tibpromma,Saowaluck
;
Phukhamsakda,Chayanard
;
Abeywickrama,Pranami D.
;
Samarakoon,Milan C.
;
Senwanna,Chanokned
;
Mapook,Ausana
;
Tang,Xia
;
Gomdola,Deecksha
;
Marasinghe,Diana S.
;
Padaruth,Oundhyalah D.
;
Balasuriya,Abhaya
;
Xu,Jianping
;
Lumyong,Saisamorn
;
Hyde,Kevin D.
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浏览/下载：55/12
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提交时间：2022/04/02
Ancestral characters
Evolution
Host-recognition
Hyaline appressoria
Infection process
Melanized appressoria
Proto-appressoria
ACTIVATED PROTEIN-KINASE
UROMYCES-VICIAE-FABAE
INFECTION STRUCTURE FORMATION
SCANNING-ELECTRON-MICROSCOPY
BEAUVERIA-BASSIANA INFECTION
BOTRYTIS-CINEREA VIRULENCE
BIOLOGICAL-CONTROL AGENTS
WALL-DEGRADING ENZYMES
GREY MOLD FUNGUS
ENTOMOPATHOGENIC FUNGUS
Mating Systems in True Morels (Morchella)
期刊论文
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS, 2021, 卷号: 85, 期号: 3, 页码: e00220-20
作者:
Du,Xi-Hui
;
Yang,Zhu L.
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浏览/下载：45/12
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提交时间：2022/04/02
mating type
heterothallism
unisexual reproduction
pseudohomothallism
spatial competition
skewed distribution
mitospore
asexual reproduction
genome analysis
evolution
SEXUAL REPRODUCTION
NEUROSPORA-CRASSA
LIFE-CYCLE
HETEROKARYON INCOMPATIBILITY
VEGETATIVE INCOMPATIBILITY
SORDARIA-MACROSPORA
POPULATION-GENETICS
PODOSPORA-ANSERINA
PURE CULTURE
MODEL FUNGUS
Phaeorrhiza (Physciaceae), a new lichen genus record to China
期刊论文
PHYTOTAXA, 2021, 卷号: 510, 期号: 3, 页码: 228-238
作者:
ZHONG,Q. I. U. Y. I.
;
ZHANG,Y. A. N. Y. U. N.
;
WANG,X. I. N. Y. U.
;
TIMDAL,E. I. N. A. R.
;
GONG,H. E. D. E.
;
WANG,Z. I. Z. H. I.
;
WANG,L. I. S. O. N. G.
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浏览/下载：54/19
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提交时间：2022/04/02
lichenized fungi
Tibetan Plateau
taxonomy
phylogeny
alpine biota
SUBUNIT RIBOSOMAL DNA
PHYLOGENY
SEQUENCE
ASCOMYCOTINA
LECANORALES
PRIMERS
NUCLEAR
FUNGI
Hoya pyrifolia (Apocynaceae), a new species from south-western Yunnan, China
期刊论文
PHYTOKEYS, 2021, 期号: 174, 页码: 95-106
作者:
Huang,Er-Feng
;
Yao,Gang
;
Jiang,Ri-Hong
;
Yang,Lei-Lei
;
Xi,Wang
;
Zhang,Zhong-Shuai
;
Zhang,Xian-Chun
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浏览/下载：63/0
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提交时间：2022/04/02
Apocynaceae
Asclepiodoideae
China
Hoya
taxonomy
Natural hybridization between two butterfly bushes in Tibet: dominance of F-1 hybrids promotes strong reproductive isolation
期刊论文
BMC PLANT BIOLOGY, 2021, 卷号: 21, 期号: 1, 页码: 133
作者:
Liao,Rongli
;
Sun,Weibang
;
Ma,Yongpeng
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浏览/下载：46/4
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提交时间：2022/04/02
Butterfly bushes
Buddleja
Hybridization
F-1-dominated hybrids
Reproductive isolation
Western Tethys origin, tropical Asia and tropical America disjunction in Berchemia and reinstatement of Phyllogeiton (Rhamneae, Rhamnaceae)
期刊论文
TAXON, 2021, 卷号: 70, 期号: 3, 页码: 515-525
作者:
Huang,Xianhan
;
Deng,Tao
;
Chen,Shaotian
;
Landis,Jacob B.
;
Lin,Nan
;
Yang,Yi
;
Hu,Guangwan
;
Zhou,Zhuo
;
Wang,Yuehua
;
Wang,Hengchang
;
Tojibaev,Komiljon Sh
;
Sun,Hang
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浏览/下载：94/18
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提交时间：2022/04/02
Asian monsoons
Berchemia
diversification
historical biogeography
North Atlantic Land Bridges
Western Tethys
Amblyanthus chenii (Primulaceae), a New Species and Generic Record from Xizang, China
期刊论文
SYSTEMATIC BOTANY, 2021, 卷号: 46, 期号: 1, 页码: 152-161
作者:
Zhou,Zhuo
;
Guo,Yong-jie
;
Yue,Ji-pei
;
Chen,Hong-hang
;
Tan,Yun-hong
;
Sun,Hang
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浏览/下载：54/14
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提交时间：2022/04/02
Amblyanthopsis
Ardisia
Medog
phylogeny
BIOGEOGRAPHY
MEDOGENSIS
SYMBIOSIS
TIME
LIFE
Molecular and morphological evidence for a new species of Isodon (Lamiaceae) from southern China
期刊论文
PLANT DIVERSITY, 2021, 卷号: 43, 期号: 1, 页码: 54-62
作者:
Chen,Ya-Ping
;
Huang,Cun-Zhong
;
Zhao,Yue
;
Xiang,Chun-Lei
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浏览/下载：69/19
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提交时间：2022/04/02
Himalaya-Hengduan
Mountains region
Isodoninae
Mericarp Sino-Japanese region
PHYLOGENETIC ANALYSIS
YUNNAN PROVINCE
NEPETOIDEAE
A preliminary phylogenetic study of Paraphlomis (Lamiaceae) based on molecular and morphological evidence
期刊论文
PLANT DIVERSITY, 2021, 卷号: 43, 期号: 3, 页码: 206-215
作者:
Chen,Ya-Ping
;
Liu,Ang
;
Yu,Xun-Lin
;
Xiang,Chun-Lei
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浏览/下载：58/26
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提交时间：2022/04/02
Ajugoides
Infrageneric classification
Matsumurella
Nutlet
Paraphlomideae
NONCODING REGIONS
CHLOROPLAST
LAMIOIDEAE
NUCLEAR
Delimiting species in Basidiomycota: a review
期刊论文
FUNGAL DIVERSITY, 2021, 卷号: 109, 期号: 1, 页码: 181-237
作者:
Cao,Bin
;
Haelewaters,Danny
;
Schoutteten,Nathan
;
Begerow,Dominik
;
Boekhout,Teun
;
Giachini,Admir J.
;
Gorjon,Sergio P.
;
Gunde-Cimerman,Nina
;
Hyde,Kevin D.
;
Kemler,Martin
;
Li,Guo-Jie
;
Liu,Dong-Mei
;
Liu,Xin-Zhan
;
Nuytinck,Jorinde
;
Papp,Viktor
;
Savchenko,Anton
;
Savchenko,Kyryll
;
Tedersoo,Leho
;
Theelen,Bart
;
Thines,Marco
;
Tomsovsky,Michal
;
Toome-Heller,Merje
;
Uron,Judith P.
;
Verbeken,Annemieke
;
Vizzini,Alfredo
;
Yurkov,Andrey M.
;
Zamora,Juan Carlos
;
Zhao,Rui-Lin
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浏览/下载：52/3
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提交时间：2022/04/02
Biological species concept
Morphological species concept
Phylogenetic species concept
Taxonomy
INTERNAL TRANSCRIBED SPACER
FRAGMENT-LENGTH-POLYMORPHISMS
FLIGHT MASS-SPECTROMETRY
RUST FUNGI PUCCINIALES
NUCLEAR RIBOSOMAL DNA
MOLECULAR PHYLOGENETIC-RELATIONSHIPS
HEBELOMA-CRUSTULINIFORME COMPLEX
ASSESSING NATURAL RELATIONSHIPS
DESORPTION IONIZATION-TIME
MULTIPLE GENE GENEALOGIES
