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KIB OpenIR
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Genetic innovations: Transposable element recruitment and de novo formation lead to the birth of orphan genes in the rice genome 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2019, 页码: 11
作者:  Jin, Gui-Hua;  Zhou, Yan-Li;  Yang, Hong;  Hu, Yan-Ting;  Shi, Yong;  Li, Ling;  Siddique, Abu N.;  Liu, Chang-Ning;  Zhu, An-Dan;  Zhang, Cheng-Jun;  Li, De-Zhu
浏览  |  Adobe PDF(845Kb)  |  收藏  |  浏览/下载：352/117  |  提交时间：2020/03/17
comparative genomics  origin  orphan gene  transposable element  
Genome Sequences Provide Insights into the Reticulate Origin and Unique Traits of Woody Bamboos 期刊论文
MOLECULAR PLANT, 2019, 卷号: 12, 期号: 10, 页码: 1353-1365
作者:  Guo, Zhen-Hua;  Ma, Peng-Fei;  Yang, Guo-Qian;  Hu, Jin-Yong;  Liu, Yun-Long;  Xia, En-Hua;  Zhong, Mi-Cai;  Zhao, Lei;  Sun, Gui-Ling;  Xu, Yu-Xing;  Zhao, You-Jie;  Zhang, Yi-Chi;  Zhang, Yu-Xiao;  Zhang, Xue-Mei;  Zhou, Meng-Yuan;  Guo, Ying;  Guo, Cen;  Liu, Jing-Xia;  Ye, Xia-Ying;  Chen, Yun-Mei;  Yang, Yang;  Hang, Bin;  Lin, Choun-Sea;  Lu, Ying;  Li, De-Zhu
浏览  |  Adobe PDF(1655Kb)  |  收藏  |  浏览/下载：422/83  |  提交时间：2019/12/20
Bambusoideae  polyploidization  comparative genomics  subgenome evolution  flowering  
Differential Quaternary dynamics of evergreen broadleaved forests in subtropical China revealed by phylogeography of Lindera aggregata (Lauraceae) 期刊论文
JOURNAL OF BIOGEOGRAPHY, 2019, 卷号: 46, 期号: 6, 页码: 1112-1123
作者:  Ye, Jun-Wei;  Li, De-Zhu;  Hampe, Arndt
浏览  |  Adobe PDF(1482Kb)  |  收藏  |  浏览/下载：255/47  |  提交时间：2019/07/29
evergreen broadleaved forests  genetic break  Lindera aggregata  microrefugia  range expansion  secondary admixture  southern refugia model  
PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes 期刊论文
PLANT METHODS, 2019, 卷号: 15, 页码: 12
作者:  Qu, Xiao-Jian;  Moore, Michael J.;  Li, De-Zhu;  Yi, Ting-Shuang
浏览  |  Adobe PDF(1302Kb)  |  收藏  |  浏览/下载：332/35  |  提交时间：2019/07/29
PGA  Plastome  Batch annotation  Accuracy  BLAST  Software  Algorithms  
Plastomes of Mimosoideae: structural and size variation, sequence divergence, and phylogenetic implication 期刊论文
TREE GENETICS & GENOMES, 2017, 卷号: 13, 期号: 2, 页码: 41
作者:  Wang, Yin-Huan;  Qu, Xiao-Jian;  Chen, Si-Yun;  Li, De-Zhu;  Yi, Ting-Shuang
浏览  |  Adobe PDF(5516Kb)  |  收藏  |  浏览/下载：237/40  |  提交时间：2017/07/10
Plastome  Ir Expansion/contraction  Repeats  Mimosoideae  Sequence Divergence  Phylogenomics  
Development of a universal and simplified ddRAD library preparation approach for SNP discovery and genotyping in angiosperm plants 期刊论文
PLANT METHODS, 2016, 卷号: 12, 期号: 1, 页码: 39
作者:  Yang, Guo-Qian;  Chen, Yun-Mei;  Wang, Jin-Peng;  Guo, Cen;  Zhao, Lei;  Wang, Xiao-Yan;  Guo, Ying;  Li, Li;  Li, De-Zhu;  Guo, Zhen-Hua
浏览  |  Adobe PDF(3378Kb)  |  收藏  |  浏览/下载：347/80  |  提交时间：2017/01/05
Rad-seq  Ddrad  Middrad  Genotype-by-sequencing  Next-generation Sequencing  
Genomic DNA Methylation Analyses Reveal the Distinct Profiles in Castor Bean Seeds with Persistent Endosperms 期刊论文
PLANT PHYSIOLOGY, 2016, 卷号: 171, 期号: 2, 页码: 1242-1258
作者:  Xu, Wei;  Yang, Tianquan;  Dong, Xue;  Li, De-Zhu;  Liu, Aizhong
浏览  |  Adobe PDF(2909Kb)  |  收藏  |  浏览/下载：370/80  |  提交时间：2016/10/19
Fifteen novel universal primer pairs for sequencing whole chloroplast genomes and a primer pair for nuclear ribosomal DNAs 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2016, 卷号: 54, 期号: 3, 页码: 219-227
作者:  Zhang, Ting;  Zeng, Chun-Xia;  Yang, Jun-Bo;  Li, Hong-Tao;  Li, De-Zhu
浏览  |  Adobe PDF(1664Kb)  |  收藏  |  浏览/下载：336/121  |  提交时间：2017/01/05
Angiosperm Chloroplast Genomes  Next-generation Sequencing  Nuclear Ribosomal Dna  Universal Primer Pairs  
DNA barcoding of Rhododendron (Ericaceae), the largest Chinese plant genus in biodiversity hotspots of the Himalaya-Hengduan Mountains 期刊论文
MOLECULAR ECOLOGY RESOURCES, 2015, 卷号: 15, 期号: 4, 页码: 932-944
作者:  Yan, Li-Jun;  Liu, Jie;  Moeller, Michael;  Zhang, Lin;  Zhang, Xue-Mei;  Li, De-Zhu;  Gao, Lian-Ming
Adobe PDF(635Kb)  |  收藏  |  浏览/下载：527/208  |  提交时间：2015/07/20
Adaptive Radiation  Biodiversity Hotspots  Dna Barcoding  Rhododendron  Species Identification  The Himalaya-hengduan Mountains  
Identification of putative orthologous genes for the phylogenetic reconstruction of temperate woody bamboos (Poaceae: Bambusoideae) 期刊论文
MOLECULAR ECOLOGY RESOURCES, 2014, 卷号: 14, 期号: 5, 页码: 988-999
作者:  Zhang, Li-Na;  Zhang, Xian-Zhi;  Zhang, Yu-Xiao;  Zeng, Chun-Xia;  Ma, Peng-Fei;  Zhao, Lei;  Guo, Zhen-Hua;  Li, De-Zhu;  Li, DZ (reprint author), Chinese Acad Sci, Kunming Inst Bot, Key Lab Plant Div & Biogeog East Asia, Kunming 650201, Yunnan, Peoples R China.;  dzl@mail.kib.ac.cn
Adobe PDF(406Kb)  |  收藏  |  浏览/下载：395/69  |  提交时间：2014/10/11
Arundinarieae  Fargesia  Orthologous Genes  Phyllostachys  Phylogeny