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Evolutionary patterns of chimeric retrogenes in Oryza species 期刊论文
SCIENTIFIC REPORTS, 2019, 卷号: 9, 页码: 12
作者:  Zhou, Yanli;  Zhang, Chengjun
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Plastome Reduction in the Only Parasitic Gymnosperm Parasitaxus Is Due to Losses of Photosynthesis but Not Housekeeping Genes and Apparently Involves the Secondary Gain of a Large Inverted Repeat 期刊论文
GENOME BIOLOGY AND EVOLUTION, 2019, 卷号: 11, 期号: 10, 页码: 2789-2796
作者:  Qu, Xiao-Jian;  Fan, Shou-Jin;  Wicke, Susann;  Yi, Ting-Shuang
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plastome  parasitism  mycoheterotrophy  gene loss  Parasitaxus  
Chloroplast phylogenomic analysis provides insights into the evolution of the largest eukaryotic genome holder, Paris japonica (Melanthiaceae) 期刊论文
BMC PLANT BIOLOGY, 2019, 卷号: 19, 页码: 11
作者:  Yang, Lifang;  Yang, Zhenyan;  Liu, Changkun;  He, Zhengshan;  Zhang, Zhirong;  Yang, Jing;  Liu, Haiyang;  Yang, Junbo;  Ji, Yunheng
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Plastome  Phylogenomics  Giant genome  Evolution  Paris japonica  Paris  Trillium govanianum  
Plastome phylogenomics of Saussurea (Asteraceae: Cardueae) 期刊论文
BMC PLANT BIOLOGY, 2019, 卷号: 19, 页码: 10
作者:  Zhang, Xu;  Deng, Tao;  Moore, Michael J.;  Ji, Yunheng;  Lin, Nan;  Zhang, Huajie;  Meng, Aiping;  Wang, Hengchang;  Sun, Yanxia;  Sun, Hang
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Saussurea  Rapid radiations  Plastome  Genome  Phylogenomic analysis  Purifying selection  
PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes 期刊论文
PLANT METHODS, 2019, 卷号: 15, 页码: 12
作者:  Qu, Xiao-Jian;  Moore, Michael J.;  Li, De-Zhu;  Yi, Ting-Shuang
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PGA  Plastome  Batch annotation  Accuracy  BLAST  Software  Algorithms  
Plastid phylogenomic insights into the evolution of Caryophyllales 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 134, 页码: 74-86
作者:  Yao, Gang;  Jin, Jian-Jun;  Li, Hong-Tao;  Yang, Jun-Bo;  Mandala, Venkata Shiva;  Croley, Matthew;  Mostow, Rebecca;  Douglas, Norman A.;  Chase, Mark W.;  Christenhusz, Maarten J. M.;  Soltis, Douglas E.;  Soltis, Pamela S.;  Smith, Stephen A.;  Brockington, Samuel F.;  Moore, Michael J.;  Yi, Ting-Shuang;  Li, De-Zhu
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Caryophyllales  Gene loss  Molecular dating  Phylogenomics  Plastome  Rapid radiation  Substitution rate  
Genome of Crucihimalaya himalaica, a close relative of Arabidopsis, shows ecological adaptation to high altitude 期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2019, 卷号: 116, 期号: 14, 页码: 7137-7146
作者:  Zhang, Ticao;  Qiao, Qin;  Novikova, Polina Yu.;  Wang, Qia;  Yue, Jipei;  Guan, Yanlong;  Ming, Shengping;  Liu, Tianmeng;  De, Ji;  Liu, Yixuan;  Al-Shehbaz, Ihsan A.;  Sun, Hang;  Van Montagu, Marc;  Huang, Jinling;  Van de Peer, Yves;  Qiong, La
浏览  |  Adobe PDF(1711Kb)  |  收藏  |  浏览/下载：310/65  |  提交时间：2019/05/24
adaptive evolution  natural selection  extreme environment  Qinghai-Tibet Plateau  S-locus  
Rapid evolution of protein diversity by de novo origination in Oryza 期刊论文
NATURE ECOLOGY & EVOLUTION, 2019, 卷号: 3, 期号: 4, 页码: 679-690
作者:  Zhang, Li;  Ren, Yan;  Yang, Tao;  Li, Guangwei;  Chen, Jianhai;  Gschwend, Andrea R.;  Yu, Yeisoo;  Hou, Guixue;  Zi, Jin;  Zhou, Ruo;  Wen, Bo;  Zhang, Jianwei;  Chougule, Kapeel;  Wang, Muhua;  Copetti, Dario;  Peng, Zhiyu;  Zhang, Chengjun;  Zhang, Yong;  Ouyang, Yidan;  Wing, Rod A.;  Liu, Siqi;  Long, Manyuan
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Lycophyte plastid genomics: extreme variation in GC, gene and intron content and multiple inversions between a direct and inverted orientation of the rRNA repeat 期刊论文
NEW PHYTOLOGIST, 2019, 卷号: 222, 期号: 2, 页码: 1061-1075
作者:  Mower, Jeffrey P.;  Ma, Peng-Fei;  Grewe, Felix;  Taylor, Alex;  Michael, Todd P.;  VanBuren, Robert;  Qiu, Yin-Long
浏览  |  Adobe PDF(767Kb)  |  收藏  |  浏览/下载：205/38  |  提交时间：2019/06/24
evolutionary stasis  gene loss  inversion  Isoetes (quillworts)  Lycopodiaceae (clubmosses)  Lycopodiophyta (lycophytes)  plastid genome (plastome)  Selaginella (spikemosses)  
Prevalence of isomeric plastomes and effectiveness of plastome super-barcodes in yews (Taxus) worldwide 期刊论文
SCIENTIFIC REPORTS, 2019, 卷号: 9, 页码: 11
作者:  Fu, Chao-Nan;  Wu, Chung-Shien;  Ye, Lin-Jiang;  Mo, Zhi-Qiong;  Liu, Jie;  Chang, Yu-Wen;  Li, De-Zhu;  Chaw, Shu-Miaw;  Gao, Lian-Ming
浏览  |  Adobe PDF(3412Kb)  |  收藏  |  浏览/下载：483/131  |  提交时间：2019/03/25